RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 KIAA1161Q6NSJ0 714 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 MISPQ8IVT2 679 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 POGLUT1Q8NBL1 392 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 SMARCD1Q96GM5 515 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 FAM117AQ9C073 453 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 MFFQ9GZY8 342 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 OR10H1Q9Y4A9 318 aa12.7□□□□□ -0.38
PABPC1-208ENST00000519004 SIRT4Q9Y6E7 314 aaPredicted RBP12.7□□□□□ -0.38
PABPC1-208ENST00000519004 TDRD15B5MCY1 1934 aaKnown RBP12.7□□□□□ -0.38
PABPC1-208ENST00000519004 LRIT2A6NDA9 550 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 COLCA2A8K830 154 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 SNRPGP15A8MWD9 76 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 C5orf58C9J3I9 102 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 ANHXE9PGG2 379 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 PEX10O60683 326 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 LY86O95711 162 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 PAK4O96013 591 aaPredicted RBP12.69□□□□□ -0.38
PABPC1-208ENST00000519004 ZNF35P13682 527 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 DEFA6Q01524 100 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 KLHL26Q53HC5 615 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 ARSIQ5FYB1 569 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 TCTN3Q6NUS6 607 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 LNX2Q8N448 690 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 HMGB4Q8WW32 186 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 SORCS1Q8WY21 1168 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 FBXO17Q96EF6 278 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 SCLYQ96I15 445 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 TMEM68Q96MH6 324 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 TMEM121BQ9BXQ6 578 aaPredicted RBP12.69□□□□□ -0.38
PABPC1-208ENST00000519004 RSPO3Q9BXY4 272 aaPredicted RBP12.69□□□□□ -0.38
PABPC1-208ENST00000519004 SLC38A1Q9H2H9 487 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 SLC32A1Q9H598 525 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 NOX3Q9HBY0 568 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 CSNK1G1Q9HCP0 422 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 ZDHHC4Q9NPG8 344 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 KDM4EB2RXH2 506 aaPredicted RBP12.69□□□□□ -0.38
PABPC1-208ENST00000519004 NEDD8-MDP1E9PL57 170 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 CTDSPLO15194 276 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 ITGA10O75578 1167 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 IL5P05113 134 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 H1F0P07305 194 aaKnown RBP12.69□□□□□ -0.38
PABPC1-208ENST00000519004 MGMTP16455 207 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 ACVRL1P37023 503 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 DLX5P56178 289 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 FAM98CQ17RN3 349 aaKnown RBP12.69□□□□□ -0.38
PABPC1-208ENST00000519004 ZXDCQ2QGD7 858 aaPredicted RBP12.69□□□□□ -0.38
PABPC1-208ENST00000519004 ANXA8L1Q5VT79 327 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 KIAA1211LQ6NV74 962 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 H3F3CQ6NXT2 135 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 SLC9B2Q86UD5 537 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 OR4D9Q8NGE8 314 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 OR52B4Q8NGK2 314 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 OR1S2Q8NGQ3 325 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 SCAMP5Q8TAC9 235 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 RAB7BQ96AH8 199 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 GINS4Q9BRT9 223 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 SLC35A5Q9BS91 424 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 MVB12BQ9H7P6 319 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 ZNF219Q9P2Y4 722 aaPredicted RBP12.69□□□□□ -0.38
PABPC1-208ENST00000519004 METTL1Q9UBP6 276 aaKnown RBP12.69□□□□□ -0.38
PABPC1-208ENST00000519004 CAMK2AQ9UQM7 478 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 PCDHGA5Q9Y5G8 931 aa12.69□□□□□ -0.38
PABPC1-208ENST00000519004 A0A1W2PPE3 182 aa12.68□□□□□ -0.38
PABPC1-208ENST00000519004 SERTM1A2A2V5 107 aa12.68□□□□□ -0.38
PABPC1-208ENST00000519004 PIP5K1CO60331 668 aa12.68□□□□□ -0.38
PABPC1-208ENST00000519004 EPHX1P07099 455 aa12.68□□□□□ -0.38
PABPC1-208ENST00000519004 ZDHHC11BP0C7U3 371 aa12.68□□□□□ -0.38
PABPC1-208ENST00000519004 ARAFP10398 606 aa12.68□□□□□ -0.38
PABPC1-208ENST00000519004 CCND3P30281 292 aaPredicted RBP12.68□□□□□ -0.38
PABPC1-208ENST00000519004 PPIAP62937 165 aaKnown RBP12.68□□□□□ -0.38
PABPC1-208ENST00000519004 HBA1P69905 142 aa12.68□□□□□ -0.38
PABPC1-208ENST00000519004 FABP9Q0Z7S8 132 aa12.68□□□□□ -0.38
PABPC1-208ENST00000519004 ZNF630Q2M218 657 aaPredicted RBP12.68□□□□□ -0.38
PABPC1-208ENST00000519004 FRG2Q64ET8 278 aa12.68□□□□□ -0.38
PABPC1-208ENST00000519004 PTRHD1Q6GMV3 140 aaKnown RBP12.68□□□□□ -0.38
PABPC1-208ENST00000519004 ZNF322Q6U7Q0 402 aaPredicted RBP12.68□□□□□ -0.38
PABPC1-208ENST00000519004 CAMKMTQ7Z624 323 aa12.68□□□□□ -0.38
PABPC1-208ENST00000519004 CFAP206Q8IYR0 622 aa12.68□□□□□ -0.38
PABPC1-208ENST00000519004 IZUMO1Q8IYV9 350 aa12.68□□□□□ -0.38
PABPC1-208ENST00000519004 SLC7A13Q8TCU3 470 aa12.68□□□□□ -0.38
PABPC1-208ENST00000519004 FRG2BQ96QU4 278 aa12.68□□□□□ -0.38
PABPC1-208ENST00000519004 GPA33Q99795 319 aa12.68□□□□□ -0.38
PABPC1-208ENST00000519004 UTP23Q9BRU9 249 aaKnown RBP12.68□□□□□ -0.38
PABPC1-208ENST00000519004 PLA2G12AQ9BZM1 189 aa12.68□□□□□ -0.38
PABPC1-208ENST00000519004 TLNRD1Q9H1K6 362 aa12.68□□□□□ -0.38
PABPC1-208ENST00000519004 RNF39Q9H2S5 420 aa12.68□□□□□ -0.38
PABPC1-208ENST00000519004 CACYBPQ9HB71 228 aaKnown RBP12.68□□□□□ -0.38
PABPC1-208ENST00000519004 RDH14Q9HBH5 336 aa12.68□□□□□ -0.38
PABPC1-208ENST00000519004 GPN1Q9HCN4 374 aaPredicted RBP12.68□□□□□ -0.38
PABPC1-208ENST00000519004 PPP1R14DQ9NXH3 145 aa12.68□□□□□ -0.38
PABPC1-208ENST00000519004 TREM2Q9NZC2 230 aa12.68□□□□□ -0.38
PABPC1-208ENST00000519004 ZNF629Q9UEG4 869 aaPredicted RBP12.68□□□□□ -0.38
PABPC1-208ENST00000519004 PCDHB10Q9UN67 800 aa12.68□□□□□ -0.38
PABPC1-208ENST00000519004 PCDHB9Q9Y5E1 797 aa12.68□□□□□ -0.38
PABPC1-208ENST00000519004 PCDHB1Q9Y5F3 818 aa12.68□□□□□ -0.38
PABPC1-208ENST00000519004 TIMM13Q9Y5L4 95 aaPredicted RBP12.68□□□□□ -0.38
PABPC1-208ENST00000519004 DOCK4Q8N1I0 1966 aa12.68□□□□□ -0.38
PABPC1-208ENST00000519004 WASH3PC4AMC7 463 aa12.68□□□□□ -0.38
PABPC1-208ENST00000519004 ZNF44P15621 663 aa12.68□□□□□ -0.38
PABPC1-208ENST00000519004 NFYBP25208 207 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms