RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 CYB5D2Q8WUJ1 264 aa6.26□□□□□ -1.41
CPNE3-203ENST00000517490 CNN2Q99439 309 aaKnown RBP6.26□□□□□ -1.41
CPNE3-203ENST00000517490 TSNAXQ99598 290 aaKnown RBP6.26□□□□□ -1.41
CPNE3-203ENST00000517490 BARHL1Q9BZE3 327 aa6.26□□□□□ -1.41
CPNE3-203ENST00000517490 ANKRD19PQ9H560 264 aa6.26□□□□□ -1.41
CPNE3-203ENST00000517490 DNMT3BQ9UBC3 853 aaKnown RBP6.26□□□□□ -1.41
CPNE3-203ENST00000517490 PLEKHB1Q9UF11 243 aaPredicted RBP6.26□□□□□ -1.41
CPNE3-203ENST00000517490 CAMK2AQ9UQM7 478 aa6.26□□□□□ -1.41
CPNE3-203ENST00000517490 NPFFR2Q9Y5X5 522 aa6.26□□□□□ -1.41
CPNE3-203ENST00000517490 H3BNC9 293 aa6.26□□□□□ -1.41
CPNE3-203ENST00000517490 SYT5O00445 386 aa6.26□□□□□ -1.41
CPNE3-203ENST00000517490 B3GALT2O43825 422 aa6.26□□□□□ -1.41
CPNE3-203ENST00000517490 SC5DO75845 299 aa6.26□□□□□ -1.41
CPNE3-203ENST00000517490 SOD1P00441 154 aa6.26□□□□□ -1.41
CPNE3-203ENST00000517490 SOD2P04179 222 aa6.26□□□□□ -1.41
CPNE3-203ENST00000517490 IFNA6P05013 189 aa6.26□□□□□ -1.41
CPNE3-203ENST00000517490 NPR2P20594 1047 aa6.26□□□□□ -1.41
CPNE3-203ENST00000517490 ACADLP28330 430 aa6.26□□□□□ -1.41
CPNE3-203ENST00000517490 PTPN6P29350 595 aa6.26□□□□□ -1.41
CPNE3-203ENST00000517490 SHC1P29353 583 aa6.26□□□□□ -1.41
CPNE3-203ENST00000517490 ADAM8P78325 824 aa6.26□□□□□ -1.41
CPNE3-203ENST00000517490 BDH1Q02338 343 aa6.26□□□□□ -1.41
CPNE3-203ENST00000517490 P2RY14Q15391 338 aa6.26□□□□□ -1.41
CPNE3-203ENST00000517490 AANATQ16613 207 aa6.26□□□□□ -1.41
CPNE3-203ENST00000517490 PIP5KL1Q5T9C9 394 aa6.26□□□□□ -1.41
CPNE3-203ENST00000517490 PRAMEF17Q5VTA0 474 aa6.26□□□□□ -1.41
CPNE3-203ENST00000517490 RAB12Q6IQ22 244 aa6.26□□□□□ -1.41
CPNE3-203ENST00000517490 NRROSQ86YC3 692 aa6.26□□□□□ -1.41
CPNE3-203ENST00000517490 NLGN4YQ8NFZ3 816 aaPredicted RBP6.26□□□□□ -1.41
CPNE3-203ENST00000517490 THAP6Q8TBB0 222 aa6.26□□□□□ -1.41
CPNE3-203ENST00000517490 PELOQ9BRX2 385 aaKnown RBP6.26□□□□□ -1.41
CPNE3-203ENST00000517490 REPIN1Q9BWE0 567 aaKnown RBP6.26□□□□□ -1.41
CPNE3-203ENST00000517490 TMEM168Q9H0V1 697 aa6.26□□□□□ -1.41
CPNE3-203ENST00000517490 NARFLQ9H6Q4 476 aa6.26□□□□□ -1.41
CPNE3-203ENST00000517490 NOX3Q9HBY0 568 aa6.26□□□□□ -1.41
CPNE3-203ENST00000517490 HMX1Q9NP08 348 aaPredicted RBP6.26□□□□□ -1.41
CPNE3-203ENST00000517490 IL20RAQ9UHF4 553 aa6.26□□□□□ -1.41
CPNE3-203ENST00000517490 OR10H1Q9Y4A9 318 aa6.26□□□□□ -1.41
CPNE3-203ENST00000517490 COLEC10Q9Y6Z7 277 aa6.26□□□□□ -1.41
CPNE3-203ENST00000517490 SLC9B1P1A6NJY1 282 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 F5H5P2 479 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 ACOT7O00154 380 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 FMO6PO60774 539 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 NFYAP23511 347 aaPredicted RBP6.25□□□□□ -1.41
CPNE3-203ENST00000517490 FPR3P25089 353 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 CLCNKAP51800 687 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 EIF5AP63241 154 aaKnown RBP6.25□□□□□ -1.41
CPNE3-203ENST00000517490 POU6F2P78424 691 aaPredicted RBP6.25□□□□□ -1.41
CPNE3-203ENST00000517490 EXOSC2Q13868 293 aaKnown RBP6.25□□□□□ -1.41
CPNE3-203ENST00000517490 OLFML2AQ68BL7 652 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 SLC8B1Q6J4K2 584 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 B3GLCTQ6Y288 498 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 HDDC3Q8N4P3 179 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 PCNPQ8WW12 178 aaKnown RBP6.25□□□□□ -1.41
CPNE3-203ENST00000517490 IGSF21Q96ID5 467 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 MS4A4AQ96JQ5 239 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 TAPBPLQ9BX59 468 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 ACTRT3Q9BYD9 372 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 C12orf10Q9HB07 376 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 ADAM29Q9UKF5 820 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 LEUTXA8MZ59 168 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 STMND1H3BQB6 276 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 HMGN2P05204 90 aaKnown RBP6.25□□□□□ -1.41
CPNE3-203ENST00000517490 CD2P06729 351 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 PPP3CBP16298 524 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 PDHA2P29803 388 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 MAT2AP31153 395 aaKnown RBP6.25□□□□□ -1.41
CPNE3-203ENST00000517490 GDNFP39905 211 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 GRK6P43250 576 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 FNTBP49356 437 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 NRG3P56975 720 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 DECR1Q16698 335 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 AKIRIN2Q53H80 203 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 UBE2NLQ5JXB2 153 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 RFLNAQ6ZTI6 216 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 ZER1Q7Z7L7 766 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 PEG10Q86TG7 708 aaKnown RBP6.25□□□□□ -1.41
CPNE3-203ENST00000517490 TMEM173Q86WV6 379 aaPredicted RBP6.25□□□□□ -1.41
CPNE3-203ENST00000517490 RBM45Q8IUH3 476 aaKnown RBP6.25□□□□□ -1.41
CPNE3-203ENST00000517490 PLPP6Q8IY26 295 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 SMPDL3BQ92485 455 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 ZNF471Q9BX82 626 aaPredicted RBP6.25□□□□□ -1.41
CPNE3-203ENST00000517490 MIXL1Q9H2W2 232 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 CCDC163A0A0D9SF12 145 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 FEZF1A0PJY2 475 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 TBC1D3BA6NDS4 549 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 GLTPD2A6NH11 291 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 GNB5O14775 395 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 GABRB1P18505 474 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 AHRP35869 848 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 TPMTP51580 245 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 OR12D2P58182 307 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 BTN3A2P78410 334 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 RASGEF1AQ8N9B8 481 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 OR6T1Q8NGN1 323 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 OR51A7Q8NH64 312 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 ABHD4Q8TB40 342 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 THAP4Q8WY91 577 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 ING5Q8WYH8 240 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 CLIP3Q96DZ5 547 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms