RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 NOCTQ9UK39 431 aaKnown RBP-2.01□□□□□ -2.73
RNU6-539P-201ENST00000516665 UBR4Q5T4S7 5183 aa-2.01□□□□□ -2.73
RNU6-539P-201ENST00000516665 ADGRA3Q8IWK6 1321 aa-2.01□□□□□ -2.73
RNU6-539P-201ENST00000516665 TNRC6BQ9UPQ9 1833 aaKnown RBP-2.02□□□□□ -2.73
RNU6-539P-201ENST00000516665 TTC28Q96AY4 2481 aa-2.02□□□□□ -2.73
RNU6-539P-201ENST00000516665 IGKV2D-26A0A0A0MRZ7 120 aa-2.02□□□□□ -2.73
RNU6-539P-201ENST00000516665 MYBPHLA2RUH7 354 aa-2.02□□□□□ -2.73
RNU6-539P-201ENST00000516665 OR6C70A6NIJ9 312 aa-2.02□□□□□ -2.73
RNU6-539P-201ENST00000516665 NPHP1O15259 732 aa-2.02□□□□□ -2.73
RNU6-539P-201ENST00000516665 PPM1GO15355 546 aaPredicted RBP-2.02□□□□□ -2.73
RNU6-539P-201ENST00000516665 SCRG1O75711 98 aa-2.02□□□□□ -2.73
RNU6-539P-201ENST00000516665 CABYRO75952 493 aa-2.02□□□□□ -2.73
RNU6-539P-201ENST00000516665 PARNO95453 639 aaKnown RBP-2.02□□□□□ -2.73
RNU6-539P-201ENST00000516665 RAB36O95755 333 aa-2.02□□□□□ -2.73
RNU6-539P-201ENST00000516665 RAB40ALP0C0E4 278 aa-2.02□□□□□ -2.73
RNU6-539P-201ENST00000516665 DCKP27707 260 aa-2.02□□□□□ -2.73
RNU6-539P-201ENST00000516665 CRKLP46109 303 aaKnown RBP-2.02□□□□□ -2.73
RNU6-539P-201ENST00000516665 CX3CR1P49238 355 aa-2.02□□□□□ -2.73
RNU6-539P-201ENST00000516665 UBXN1Q04323 297 aa-2.02□□□□□ -2.73
RNU6-539P-201ENST00000516665 GPR50Q13585 617 aa-2.02□□□□□ -2.73
RNU6-539P-201ENST00000516665 C10orf91Q5T1B1 145 aa-2.02□□□□□ -2.73
RNU6-539P-201ENST00000516665 IL31Q6EBC2 164 aa-2.02□□□□□ -2.73
RNU6-539P-201ENST00000516665 UNQ9370/PRO34162Q6UXP9 181 aa-2.02□□□□□ -2.73
RNU6-539P-201ENST00000516665 DTX3LQ8TDB6 740 aa-2.02□□□□□ -2.73
RNU6-539P-201ENST00000516665 C17orf50Q8WW18 174 aa-2.02□□□□□ -2.73
RNU6-539P-201ENST00000516665 LRRC59Q96AG4 307 aaKnown RBP-2.02□□□□□ -2.73
RNU6-539P-201ENST00000516665 OBSCN-AS1Q96MR7 158 aa-2.02□□□□□ -2.73
RNU6-539P-201ENST00000516665 GDAP1L1Q96MZ0 367 aa-2.02□□□□□ -2.73
RNU6-539P-201ENST00000516665 ZNF251Q9BRH9 671 aa-2.02□□□□□ -2.73
RNU6-539P-201ENST00000516665 MAGT1Q9H0U3 335 aa-2.02□□□□□ -2.73
RNU6-539P-201ENST00000516665 ABCG8Q9H221 673 aa-2.02□□□□□ -2.73
RNU6-539P-201ENST00000516665 TBC1D22BQ9NU19 505 aa-2.02□□□□□ -2.73
RNU6-539P-201ENST00000516665 DDX18Q9NVP1 670 aaKnown RBP-2.02□□□□□ -2.73
RNU6-539P-201ENST00000516665 AIG1Q9NVV5 245 aa-2.02□□□□□ -2.73
RNU6-539P-201ENST00000516665 ZNF226Q9NYT6 803 aa-2.02□□□□□ -2.73
RNU6-539P-201ENST00000516665 TXNDC16Q9P2K2 825 aa-2.02□□□□□ -2.73
RNU6-539P-201ENST00000516665 BTNL2Q9UIR0 455 aa-2.02□□□□□ -2.73
RNU6-539P-201ENST00000516665 PLAGL1Q9UM63 463 aa-2.02□□□□□ -2.73
RNU6-539P-201ENST00000516665 L3MBTL1Q9Y468 752 aa-2.02□□□□□ -2.73
RNU6-539P-201ENST00000516665 SPACA6W5XKT8 324 aa-2.02□□□□□ -2.73
RNU6-539P-201ENST00000516665 KIAA1109Q2LD37 5005 aa-2.02□□□□□ -2.73
RNU6-539P-201ENST00000516665 A0A087WZY1 265 aa-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 PLAC8L1A1L4L8 177 aa-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 LEUTXA8MZ59 168 aa-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 C19orf81C9J6K1 198 aa-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 ANXA9O76027 345 aa-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 SNAPINO95295 136 aa-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 PGLSO95336 258 aa-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 TSPAN13O95857 204 aa-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 SLC4A1P02730 911 aa-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 GBAP04062 536 aa-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 STAG3L1P0CL83 205 aa-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 C1GALT1C1LP0DN25 315 aa-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 SAGP10523 405 aaPredicted RBP-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 CDH2P19022 906 aaPredicted RBP-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 BDNFP23560 247 aa-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 ACKR3P25106 362 aa-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 ADORA2BP29275 332 aa-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 BTCP35070 178 aa-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 PAFAH1B1P43034 410 aa-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 HAND2P61296 217 aa-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 UBE3AQ05086 875 aa-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 SLC10A7Q0GE19 358 aa-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 ST3GAL4Q11206 333 aa-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 CAMK4Q16566 473 aa-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 PTGISQ16647 500 aa-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 TMEM211Q6ICI0 200 aa-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 FRMPD2BQ6IN97 320 aa-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 LYPD2Q6UXB3 125 aa-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 ZNF620Q6ZNG0 422 aa-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 TOGARAM2Q6ZUX3 1019 aa-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 NAT8LQ8N9F0 302 aa-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 CCDC191Q8NCU4 936 aa-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 CATSPER1Q8NEC5 780 aa-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 PDCD6IPQ8WUM4 868 aaKnown RBP-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 TCP11Q8WWU5 503 aa-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 NARS2Q96I59 477 aaKnown RBP-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 SEPHS2Q99611 448 aa-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 CCM2Q9BSQ5 444 aa-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 CXXC4Q9H2H0 198 aa-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 ST6GALNAC4Q9H4F1 302 aa-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 MEPEQ9NQ76 525 aaPredicted RBP-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 VPS18Q9P253 973 aa-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 ZNF492Q9P255 531 aa-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 SPRR3Q9UBC9 169 aa-2.03□□□□□ -2.73
RNU6-539P-201ENST00000516665 TRAV18A0A075B6X5 111 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 IGKV2-40A0A087WW87 121 aaPredicted RBP-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 E9PLD3 99 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 CCSO14618 274 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 MITFO75030 526 aaPredicted RBP-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 TBX10O75333 385 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 ZNF189O75820 626 aaPredicted RBP-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 CPNE6O95741 557 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 IGKV2D-40P01614 121 aaPredicted RBP-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 ZFYP08048 801 aaPredicted RBP-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 GABRB1P18505 474 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 PCGF2P35227 344 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 CDH13P55290 713 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 RAP1AP62834 184 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 POLR2LP62875 67 aaKnown RBP-2.04□□□□□ -2.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms