RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 ZNF141Q15928 474 aa7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ENTPD8Q5MY95 495 aa7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 PDZK1Q5T2W1 519 aa7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 SWT1Q5T5J6 900 aaKnown RBP7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 UGT2A3Q6UWM9 527 aa7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 C6orf15Q6UXA7 325 aaPredicted RBP7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 HSDL2Q6YN16 418 aa7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 PLEKHM3Q6ZWE6 761 aa7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 SLCO6A1Q86UG4 719 aa7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 C9orf40Q8IXQ3 194 aa7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 CMIPQ8IY22 773 aa7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 SLC34A3Q8N130 599 aa7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 LINC00471Q8N535 108 aa7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 SLC5A8Q8N695 610 aa7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ZNF527Q8NB42 609 aa7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ZSCAN1Q8NBB4 408 aa7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 AQP11Q8NBQ7 271 aa7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 C17orf47Q8NEP4 570 aa7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 NFAM1Q8NET5 270 aaPredicted RBP7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 OR2Y1Q8NGV0 311 aa7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 WDR36Q8NI36 951 aaKnown RBP7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 CNOT9Q92600 299 aaKnown RBP7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 GATA6Q92908 595 aa7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 SLC35B4Q969S0 331 aa7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 EFHD2Q96C19 240 aaPredicted RBP7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 HSPBAP1Q96EW2 488 aa7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 MBOAT4Q96T53 435 aa7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 FEVQ99581 238 aa7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 WDR77Q9BQA1 342 aaPredicted RBP7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 PSD2Q9BQI7 771 aa7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 SEMA4CQ9C0C4 833 aa7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 POLR2J2Q9GZM3 115 aaKnown RBP7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 POLR2J3Q9H1A7 115 aaKnown RBP7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 RIBC2Q9H4K1 309 aa7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 CTPS2Q9NRF8 586 aa7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 UBQLN4Q9NRR5 601 aa7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 FAM118AQ9NWS6 357 aa7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ENOPH1Q9UHY7 261 aa7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 PADI1Q9ULC6 663 aa7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 PPIEQ9UNP9 301 aaKnown RBP7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 POFUT2Q9Y2G5 429 aa7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 EP300Q09472 2414 aaPredicted RBP7.05□□□□□ -1.28
SCARNA20.1-201ENST00000516009 MUC6Q6W4X9 2439 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 LOC102723996A0A087X1L8 192 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 TRBV11-1A0A0K0K1C0 115 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 LOC100130705A0A1B0GUX0 176 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 SH3PXD2BA1X283 911 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 CDC14CA4D256 554 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 PMS2P1A4D2B8 440 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 SERINC4A6NH21 518 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 SCDO00767 359 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 SLC16A6O15403 523 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 OR10H3O60404 316 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 TPST2O60704 377 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 FMO6PO60774 539 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 MITFO75030 526 aaPredicted RBP7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 UGT2B11O75310 529 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 REM1O75628 298 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 KLF7O75840 302 aaPredicted RBP7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 DLGAP3O95886 979 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ADAP00813 363 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 UMODP07911 640 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 LYNP07948 512 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 GNAO1P09471 354 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 GKN3PP0CG01 181 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 PRG2P13727 222 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 HPGDP15428 266 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 TBXA2RP21731 343 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 FUT4P22083 530 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 RNF144AP50876 292 aaPredicted RBP7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ZNF136P52737 540 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 CHN2P52757 468 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 LIMK1P53667 647 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 PNLIPRP2P54317 469 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 UGT2B15P54855 530 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 NRG3P56975 720 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 SLC26A5P58743 744 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 HOXC5Q00444 222 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 PLCXD2Q0VAA5 305 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 IL18R1Q13478 541 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 SEC23BQ15437 767 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 C3orf38Q5JPI3 329 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 PODNL1Q6PEZ8 512 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 USP51Q70EK9 711 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ZNF550Q7Z398 422 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 TSPYL5Q86VY4 417 aaPredicted RBP7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 GRAMD2AQ8IUY3 354 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 PRR22Q8IZ63 422 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ZNF441Q8N8Z8 693 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 APCDD1LQ8NCL9 501 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 TOR1AIP2Q8NFQ8 470 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 OR9Q2Q8NGE9 314 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 NUBPLQ8TB37 319 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 SLC7A13Q8TCU3 470 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ADAMTS16Q8TE57 1224 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 DIO2Q92813 273 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 SLC38A4Q969I6 547 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 TP53INP1Q96A56 240 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 C8orf44Q96CB5 159 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms