RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, human

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-231	ENST00000515620	IGLV3-32	A0A0A0MS00	114 aa		9.27	□□□□□ -0.93
CLDND1-231	ENST00000515620	GOLGA6L10	A0A0M3HER8	536 aa		9.27	□□□□□ -0.93
CLDND1-231	ENST00000515620	CXorf49	A8MYA2	514 aa	Predicted RBP	9.27	□□□□□ -0.93
CLDND1-231	ENST00000515620	VWC2L	B2RUY7	222 aa		9.27	□□□□□ -0.93
CLDND1-231	ENST00000515620	ZNF814	B7Z6K7	855 aa		9.27	□□□□□ -0.93
CLDND1-231	ENST00000515620	CLDN9	O95484	217 aa		9.27	□□□□□ -0.93
CLDND1-231	ENST00000515620	ESRRB	O95718	433 aa		9.27	□□□□□ -0.93
CLDND1-231	ENST00000515620	PABPC4L	P0CB38	370 aa	Known RBP	9.27	□□□□□ -0.93
CLDND1-231	ENST00000515620	MTHFD2	P13995	350 aa		9.27	□□□□□ -0.93
CLDND1-231	ENST00000515620	PTMS	P20962	102 aa		9.27	□□□□□ -0.93
CLDND1-231	ENST00000515620	ME2	P23368	584 aa		9.27	□□□□□ -0.93
CLDND1-231	ENST00000515620	IVD	P26440	423 aa		9.27	□□□□□ -0.93
CLDND1-231	ENST00000515620	PDLIM4	P50479	330 aa		9.27	□□□□□ -0.93
CLDND1-231	ENST00000515620	PSG6	Q00889	435 aa		9.27	□□□□□ -0.93
CLDND1-231	ENST00000515620	RNPS1	Q15287	305 aa	Known RBP	9.27	□□□□□ -0.93
CLDND1-231	ENST00000515620	SGO1	Q5FBB7	561 aa		9.27	□□□□□ -0.93
CLDND1-231	ENST00000515620	PDSS1	Q5T2R2	415 aa		9.27	□□□□□ -0.93
CLDND1-231	ENST00000515620	ESPNL	Q6ZVH7	1005 aa		9.27	□□□□□ -0.93
CLDND1-231	ENST00000515620	CMC1	Q7Z7K0	106 aa		9.27	□□□□□ -0.93
CLDND1-231	ENST00000515620	TBC1D1	Q86TI0	1168 aa	Predicted RBP	9.27	□□□□□ -0.93
CLDND1-231	ENST00000515620	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	9.27	□□□□□ -0.93
CLDND1-231	ENST00000515620	SPC24	Q8NBT2	197 aa		9.27	□□□□□ -0.93
CLDND1-231	ENST00000515620	OR7G2	Q8NG99	324 aa		9.27	□□□□□ -0.93
CLDND1-231	ENST00000515620	TRPC4AP	Q8TEL6	797 aa		9.27	□□□□□ -0.93
CLDND1-231	ENST00000515620	OSTF1	Q92882	214 aa		9.27	□□□□□ -0.93
CLDND1-231	ENST00000515620	TM4SF18	Q96CE8	201 aa		9.27	□□□□□ -0.93
CLDND1-231	ENST00000515620	RADIL	Q96JH8	1075 aa		9.27	□□□□□ -0.93
CLDND1-231	ENST00000515620	SOX7	Q9BT81	388 aa		9.27	□□□□□ -0.93
CLDND1-231	ENST00000515620	TAS2R9	Q9NYW1	312 aa		9.27	□□□□□ -0.93
CLDND1-231	ENST00000515620	SLC12A4	Q9UP95	1085 aa		9.27	□□□□□ -0.93
CLDND1-231	ENST00000515620	ACOT9	Q9Y305	439 aa		9.27	□□□□□ -0.93
CLDND1-231	ENST00000515620		A0A087WZY1	265 aa		9.26	□□□□□ -0.93
CLDND1-231	ENST00000515620	GOLGA8Q	A0A0J9YX86	632 aa		9.26	□□□□□ -0.93
CLDND1-231	ENST00000515620	GOLGA8O	A6NCC3	632 aa		9.26	□□□□□ -0.93
CLDND1-231	ENST00000515620	SYCE1L	A8MT33	242 aa		9.26	□□□□□ -0.93
CLDND1-231	ENST00000515620	GOLGA8N	F8WBI6	632 aa		9.26	□□□□□ -0.93
CLDND1-231	ENST00000515620	GOLGA8R	I6L899	631 aa		9.26	□□□□□ -0.93
CLDND1-231	ENST00000515620	ANGPTL1	O95841	491 aa		9.26	□□□□□ -0.93
CLDND1-231	ENST00000515620	LTA4H	P09960	611 aa	Known RBP	9.26	□□□□□ -0.93
CLDND1-231	ENST00000515620	CREB1	P16220	341 aa		9.26	□□□□□ -0.93
CLDND1-231	ENST00000515620	SFTPD	P35247	375 aa		9.26	□□□□□ -0.93
CLDND1-231	ENST00000515620	ZNF83	P51522	516 aa		9.26	□□□□□ -0.93
CLDND1-231	ENST00000515620	ALDH18A1	P54886	795 aa	Known RBP	9.26	□□□□□ -0.93
CLDND1-231	ENST00000515620	CARD18	P57730	90 aa		9.26	□□□□□ -0.93
CLDND1-231	ENST00000515620	RAC1	P63000	192 aa		9.26	□□□□□ -0.93
CLDND1-231	ENST00000515620	C17orf67	Q0P5P2	114 aa		9.26	□□□□□ -0.93
CLDND1-231	ENST00000515620	GALNT1	Q10472	559 aa	Predicted RBP	9.26	□□□□□ -0.93
CLDND1-231	ENST00000515620	CSTF3	Q12996	717 aa	Known RBP	9.26	□□□□□ -0.93
CLDND1-231	ENST00000515620	DECR1	Q16698	335 aa		9.26	□□□□□ -0.93
CLDND1-231	ENST00000515620	CYP27C1	Q4G0S4	372 aa		9.26	□□□□□ -0.93
CLDND1-231	ENST00000515620	IQCC	Q4KMZ1	466 aa		9.26	□□□□□ -0.93
CLDND1-231	ENST00000515620	TMEM108	Q6UXF1	575 aa		9.26	□□□□□ -0.93
CLDND1-231	ENST00000515620		Q6ZT83	130 aa		9.26	□□□□□ -0.93
CLDND1-231	ENST00000515620	SEMA6D	Q8NFY4	1073 aa		9.26	□□□□□ -0.93
CLDND1-231	ENST00000515620	KCTD4	Q8WVF5	259 aa		9.26	□□□□□ -0.93
CLDND1-231	ENST00000515620	EXOSC8	Q96B26	276 aa	Known RBP	9.26	□□□□□ -0.93
CLDND1-231	ENST00000515620	PBK	Q96KB5	322 aa		9.26	□□□□□ -0.93
CLDND1-231	ENST00000515620	KLHL15	Q96M94	604 aa		9.26	□□□□□ -0.93
CLDND1-231	ENST00000515620	CPNE1	Q99829	537 aa		9.26	□□□□□ -0.93
CLDND1-231	ENST00000515620	SRXN1	Q9BYN0	137 aa		9.26	□□□□□ -0.93
CLDND1-231	ENST00000515620	NOL11	Q9H8H0	719 aa	Known RBP	9.26	□□□□□ -0.93
CLDND1-231	ENST00000515620	PRSS50	Q9UI38	385 aa		9.26	□□□□□ -0.93
CLDND1-231	ENST00000515620	MGAT4B	Q9UQ53	548 aa		9.26	□□□□□ -0.93
CLDND1-231	ENST00000515620	FKBP7	Q9Y680	259 aa		9.26	□□□□□ -0.93
CLDND1-231	ENST00000515620		A0A1W2PRB8	838 aa		9.25	□□□□□ -0.93
CLDND1-231	ENST00000515620	NDUFS8	O00217	210 aa		9.25	□□□□□ -0.93
CLDND1-231	ENST00000515620	OR7A17	O14581	309 aa		9.25	□□□□□ -0.93
CLDND1-231	ENST00000515620	PLOD3	O60568	738 aa		9.25	□□□□□ -0.93
CLDND1-231	ENST00000515620	COQ9	O75208	318 aa		9.25	□□□□□ -0.93
CLDND1-231	ENST00000515620	UTS2	O95399	124 aa		9.25	□□□□□ -0.93
CLDND1-231	ENST00000515620	YES1	P07947	543 aa		9.25	□□□□□ -0.93
CLDND1-231	ENST00000515620	DHRS4L1	P0CG22	281 aa		9.25	□□□□□ -0.93
CLDND1-231	ENST00000515620	BMP4	P12644	408 aa		9.25	□□□□□ -0.93
CLDND1-231	ENST00000515620	ZNF23	P17027	643 aa		9.25	□□□□□ -0.93
CLDND1-231	ENST00000515620	GGT1	P19440	569 aa		9.25	□□□□□ -0.93
CLDND1-231	ENST00000515620	PSMA4	P25789	261 aa	Known RBP	9.25	□□□□□ -0.93
CLDND1-231	ENST00000515620	SHC1	P29353	583 aa		9.25	□□□□□ -0.93
CLDND1-231	ENST00000515620	GP5	P40197	560 aa		9.25	□□□□□ -0.93
CLDND1-231	ENST00000515620	COMP	P49747	757 aa	Predicted RBP	9.25	□□□□□ -0.93
CLDND1-231	ENST00000515620	ZNF41	P51814	821 aa	Predicted RBP	9.25	□□□□□ -0.93
CLDND1-231	ENST00000515620	CCNG1	P51959	295 aa		9.25	□□□□□ -0.93
CLDND1-231	ENST00000515620	DEFA6	Q01524	100 aa		9.25	□□□□□ -0.93
CLDND1-231	ENST00000515620	CHRNB3	Q05901	458 aa		9.25	□□□□□ -0.93
CLDND1-231	ENST00000515620	IFT88	Q13099	833 aa		9.25	□□□□□ -0.93
CLDND1-231	ENST00000515620	PLPPR5	Q32ZL2	321 aa		9.25	□□□□□ -0.93
CLDND1-231	ENST00000515620	GRAMD1B	Q3KR37	738 aa		9.25	□□□□□ -0.93
CLDND1-231	ENST00000515620	TIMM23B	Q5SRD1	257 aa		9.25	□□□□□ -0.93
CLDND1-231	ENST00000515620	ZNF544	Q6NX49	715 aa		9.25	□□□□□ -0.93
CLDND1-231	ENST00000515620	APOOL	Q6UXV4	268 aa		9.25	□□□□□ -0.93
CLDND1-231	ENST00000515620	RINL	Q6ZS11	566 aa		9.25	□□□□□ -0.93
CLDND1-231	ENST00000515620	ZBED8	Q8IZ13	594 aa		9.25	□□□□□ -0.93
CLDND1-231	ENST00000515620	FAM9C	Q8IZT9	166 aa		9.25	□□□□□ -0.93
CLDND1-231	ENST00000515620	LILRA2	Q8N149	483 aa		9.25	□□□□□ -0.93
CLDND1-231	ENST00000515620	C1orf52	Q8N6N3	182 aa	Known RBP	9.25	□□□□□ -0.93
CLDND1-231	ENST00000515620	GATS	Q8NAP1	163 aa		9.25	□□□□□ -0.93
CLDND1-231	ENST00000515620	ZFAND2B	Q8WV99	257 aa		9.25	□□□□□ -0.93
CLDND1-231	ENST00000515620	CDKL2	Q92772	493 aa		9.25	□□□□□ -0.93
CLDND1-231	ENST00000515620	GCDH	Q92947	438 aa	Predicted RBP	9.25	□□□□□ -0.93
CLDND1-231	ENST00000515620	ATP6V1E2	Q96A05	226 aa		9.25	□□□□□ -0.93
CLDND1-231	ENST00000515620	CPNE4	Q96A23	557 aa	Predicted RBP	9.25	□□□□□ -0.93

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms