RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 MOAP1Q96BY2 351 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 LRR1Q96L50 414 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 FN3KQ9H479 309 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 OR6C2Q9NZP2 312 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 PLEKHA6Q9Y2H5 1048 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 F8W036 122 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 M0R036 132 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 ZNF432O94892 652 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 MRPL3P09001 348 aaKnown RBP12.38□□□□□ -0.43
TCOF1-213ENST00000514442 GP1BBP13224 206 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 FOSL2P15408 326 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 CTRB1P17538 263 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 CERS1P27544 350 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 PSMB5P28074 263 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 BTG1P62324 171 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 BLOC1S1P78537 153 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 TRAM1Q15629 374 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 SOWAHCQ53LP3 525 aaPredicted RBP12.38□□□□□ -0.43
TCOF1-213ENST00000514442 RPS26P11Q5JNZ5 115 aaPredicted RBP12.38□□□□□ -0.43
TCOF1-213ENST00000514442 CTRB2Q6GPI1 263 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 UBXN10Q96LJ8 280 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 GPR78Q96P69 363 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 ACPTQ9BZG2 426 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 HYKKA2RU49 373 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 MROH6A6NGR9 719 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 ZNF726A6NNF4 738 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 PRAMEF2O60811 474 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 OSMP13725 252 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 AGTR1P30556 359 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 TAS2R43P59537 309 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 RBBP4Q09028 425 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 BAK1Q16611 211 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 PDZD3Q86UT5 571 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 FANK1Q8TC84 345 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 FKBP10Q96AY3 582 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 FCRL1Q96LA6 429 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 SCPEP1Q9HB40 452 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 PRMT8Q9NR22 394 aaPredicted RBP12.38□□□□□ -0.43
TCOF1-213ENST00000514442 TAS2R16Q9NYV7 291 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 DUX1O43812 170 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 TRAPPC6AO75865 159 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 ABLIM3O94929 683 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 RAB2AP61019 212 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 LPAL2Q16609 132 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 DGLUCYQ7Z3D6 616 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 C12orf40Q86WS4 652 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 SYT14Q8NB59 555 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 TMEM19Q96HH6 336 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 HSPA12BQ96MM6 686 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 MCCC2Q9HCC0 563 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.38□□□□□ -0.43
TCOF1-213ENST00000514442 SLC23A1Q9UHI7 598 aa12.38□□□□□ -0.43
TCOF1-213ENST00000514442 LINC01553A4QN01 128 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 LEUTXA8MZ59 168 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 EIF1AYO14602 144 aaKnown RBP12.37□□□□□ -0.43
TCOF1-213ENST00000514442 HCRTR2O43614 444 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 C1QAP02745 245 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 SDC1P18827 310 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 ITGA3P26006 1051 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 CBX5P45973 191 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 RABIFP47224 123 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 CSNK1DP48730 415 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 ZNF169Q14929 603 aaPredicted RBP12.37□□□□□ -0.43
TCOF1-213ENST00000514442 TMEM35AQ53FP2 167 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 SAXO2Q658L1 398 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 TEX261Q6UWH6 196 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 CBLL1Q75N03 491 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 NAGSQ8N159 534 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 C12orf45Q8N5I9 185 aaPredicted RBP12.37□□□□□ -0.43
TCOF1-213ENST00000514442 OR52P1PQ8NH57 321 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 OR51A7Q8NH64 312 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 OR2A14Q96R47 310 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 C7orf50Q9BRJ6 194 aaKnown RBP12.37□□□□□ -0.43
TCOF1-213ENST00000514442 STARD5Q9NSY2 213 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 TMEM184CQ9NVA4 438 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 U3KQ87 197 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 LAMTOR5O43504 91 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 LILRB3O75022 631 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 IFNA6P05013 189 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 RNH1P13489 461 aaKnown RBP12.37□□□□□ -0.43
TCOF1-213ENST00000514442 DRD1P21728 446 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 PCMT1P22061 227 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 FBLP22087 321 aaKnown RBP12.37□□□□□ -0.43
TCOF1-213ENST00000514442 TEKQ02763 1124 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 FGL1Q08830 312 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 VEZF1Q14119 521 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 SPPL3Q8TCT6 385 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 MCOLN1Q9GZU1 580 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 GABARAPL1Q9H0R8 117 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 NLGN3Q9NZ94 848 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 NDRG4Q9ULP0 352 aaKnown RBP12.37□□□□□ -0.43
TCOF1-213ENST00000514442 ZNF705EA8MWA4 302 aaPredicted RBP12.37□□□□□ -0.43
TCOF1-213ENST00000514442 NPIPA5E9PKD4 350 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 FLRT2O43155 660 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 CSTAP01040 98 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 GIFP27352 417 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 TAS2R38P59533 333 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 HES5Q5TA89 166 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 ANKRD34AQ69YU3 496 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 SLC25A24Q6NUK1 477 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms