RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 PCYOX1LQ8NBM8 494 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 FAM98AQ8NCA5 519 aaKnown RBP8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 CPT1CQ8TCG5 803 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 SLC38A5Q8WUX1 472 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 RNF138Q8WVD3 245 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 ZG16BQ96DA0 208 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 DMRTB1Q96MA1 342 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 GNRHR2Q96P88 292 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 SECISBP2Q96T21 854 aaKnown RBP8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 G6PC3Q9BUM1 346 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 THUMPD3Q9BV44 507 aaKnown RBP8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 ANGPTL4Q9BY76 406 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 TBL1XR1Q9BZK7 514 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 DEFB127Q9H1M4 99 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 SLC38A1Q9H2H9 487 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 ZNF703Q9H7S9 590 aaPredicted RBP8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 NANOGQ9H9S0 305 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 OLAHQ9NV23 265 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 FBXL2Q9UKC9 423 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 PACSIN3Q9UKS6 424 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 BOKQ9UMX3 212 aaPredicted RBP8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 NPIPA1Q9UND3 350 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 EVPLLA8MZ36 301 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 NPIPB9F8W1W9 429 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 KLRC4-KLRK1H3BQV0 150 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 SCDO00767 359 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 CDK2AP1O14519 115 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 CDC40O60508 579 aaKnown RBP eCLIP8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 STX11O75558 287 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 UGT2B17O75795 530 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 PDE9AO76083 593 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 GLSO94925 669 aaPredicted RBP8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 AGR2O95994 175 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 AK1P00568 194 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 ARAFP10398 606 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 BMP2P12643 396 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 PPIBP23284 216 aaKnown RBP8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 GDF1P27539 372 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 PRDX6P30041 224 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 SLC7A2P52569 658 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 PSPHP78330 225 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 FADDQ13158 208 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 ART3Q13508 389 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 TOMM20Q15388 145 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 IGFBP7Q16270 282 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 INAQ16352 499 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 TBCELQ5QJ74 424 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 FAM91A1Q658Y4 838 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 SLC30A6Q6NXT4 461 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 RPUSD3Q6P087 351 aaKnown RBP8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 VRK2Q86Y07 508 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 PTOV1Q86YD1 416 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 SPPL2CQ8IUH8 684 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 ZZZ3Q8IYH5 903 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 WDSUB1Q8N9V3 476 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 OR10A6Q8NH74 314 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 PHOSPHO1Q8TCT1 267 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 NR4A3Q92570 626 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 CMTM5Q96DZ9 223 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 TMEM41AQ96HV5 264 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 SLC6A15Q9H2J7 730 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 RAD21L1Q9H4I0 556 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 A4GALTQ9NPC4 353 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 UBQLN4Q9NRR5 601 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 GID8Q9NWU2 228 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 CMTM6Q9NX76 183 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 MED11Q9P086 117 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 PPP4R1LQ9P1A2 415 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 TNFRSF10DQ9UBN6 386 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 TAGLN3Q9UI15 199 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 ABCG2Q9UNQ0 655 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 C15orf41Q9Y2V0 281 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 L3MBTL1Q9Y468 752 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 PCDHGB6Q9Y5F9 930 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 PCDHGB3Q9Y5G1 929 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 SHANK1Q9Y566 2161 aa8.94□□□□□ -0.98
TOPBP1-209ENST00000513818 SHISA8B8ZZ34 492 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 ALG1L2C9J202 215 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 C5orf58C9J3I9 102 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 ACOT7O00154 380 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 NME4O00746 187 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 CYP7B1O75881 506 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 UBOX5O94941 541 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 TFPTP0C1Z6 253 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 HPGDP15428 266 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 GPX2P18283 190 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 TBXA2RP21731 343 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 SLC6A2P23975 617 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 UQCRFS1P47985 274 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 CCR4P51679 360 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 TDGF1P3P51864 188 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 CRISP3P54108 245 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 ATP12AP54707 1039 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 PSME3P61289 254 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 MXRA7P84157 204 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 SLC25A3Q00325 362 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 CDK6Q00534 326 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 PLAURQ03405 335 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 ZNF117Q03924 483 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 SCARB2Q14108 478 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms