RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 MTHFD2P13995 350 aa9.27□□□□□ -0.93
CLDND1-227ENST00000513452 PTMSP20962 102 aa9.27□□□□□ -0.93
CLDND1-227ENST00000513452 ME2P23368 584 aa9.27□□□□□ -0.93
CLDND1-227ENST00000513452 IVDP26440 423 aa9.27□□□□□ -0.93
CLDND1-227ENST00000513452 PDLIM4P50479 330 aa9.27□□□□□ -0.93
CLDND1-227ENST00000513452 PSG6Q00889 435 aa9.27□□□□□ -0.93
CLDND1-227ENST00000513452 RNPS1Q15287 305 aaKnown RBP9.27□□□□□ -0.93
CLDND1-227ENST00000513452 SGO1Q5FBB7 561 aa9.27□□□□□ -0.93
CLDND1-227ENST00000513452 PDSS1Q5T2R2 415 aa9.27□□□□□ -0.93
CLDND1-227ENST00000513452 ESPNLQ6ZVH7 1005 aa9.27□□□□□ -0.93
CLDND1-227ENST00000513452 CMC1Q7Z7K0 106 aa9.27□□□□□ -0.93
CLDND1-227ENST00000513452 TBC1D1Q86TI0 1168 aaPredicted RBP9.27□□□□□ -0.93
CLDND1-227ENST00000513452 GTPBP8Q8N3Z3 284 aaPredicted RBP9.27□□□□□ -0.93
CLDND1-227ENST00000513452 SPC24Q8NBT2 197 aa9.27□□□□□ -0.93
CLDND1-227ENST00000513452 OR7G2Q8NG99 324 aa9.27□□□□□ -0.93
CLDND1-227ENST00000513452 TRPC4APQ8TEL6 797 aa9.27□□□□□ -0.93
CLDND1-227ENST00000513452 OSTF1Q92882 214 aa9.27□□□□□ -0.93
CLDND1-227ENST00000513452 TM4SF18Q96CE8 201 aa9.27□□□□□ -0.93
CLDND1-227ENST00000513452 RADILQ96JH8 1075 aa9.27□□□□□ -0.93
CLDND1-227ENST00000513452 SOX7Q9BT81 388 aa9.27□□□□□ -0.93
CLDND1-227ENST00000513452 TAS2R9Q9NYW1 312 aa9.27□□□□□ -0.93
CLDND1-227ENST00000513452 SLC12A4Q9UP95 1085 aa9.27□□□□□ -0.93
CLDND1-227ENST00000513452 ACOT9Q9Y305 439 aa9.27□□□□□ -0.93
CLDND1-227ENST00000513452 A0A087WZY1 265 aa9.26□□□□□ -0.93
CLDND1-227ENST00000513452 GOLGA8QA0A0J9YX86 632 aa9.26□□□□□ -0.93
CLDND1-227ENST00000513452 GOLGA8OA6NCC3 632 aa9.26□□□□□ -0.93
CLDND1-227ENST00000513452 SYCE1LA8MT33 242 aa9.26□□□□□ -0.93
CLDND1-227ENST00000513452 GOLGA8NF8WBI6 632 aa9.26□□□□□ -0.93
CLDND1-227ENST00000513452 GOLGA8RI6L899 631 aa9.26□□□□□ -0.93
CLDND1-227ENST00000513452 ANGPTL1O95841 491 aa9.26□□□□□ -0.93
CLDND1-227ENST00000513452 LTA4HP09960 611 aaKnown RBP9.26□□□□□ -0.93
CLDND1-227ENST00000513452 CREB1P16220 341 aa9.26□□□□□ -0.93
CLDND1-227ENST00000513452 SFTPDP35247 375 aa9.26□□□□□ -0.93
CLDND1-227ENST00000513452 ZNF83P51522 516 aa9.26□□□□□ -0.93
CLDND1-227ENST00000513452 ALDH18A1P54886 795 aaKnown RBP9.26□□□□□ -0.93
CLDND1-227ENST00000513452 CARD18P57730 90 aa9.26□□□□□ -0.93
CLDND1-227ENST00000513452 RAC1P63000 192 aa9.26□□□□□ -0.93
CLDND1-227ENST00000513452 C17orf67Q0P5P2 114 aa9.26□□□□□ -0.93
CLDND1-227ENST00000513452 GALNT1Q10472 559 aaPredicted RBP9.26□□□□□ -0.93
CLDND1-227ENST00000513452 CSTF3Q12996 717 aaKnown RBP9.26□□□□□ -0.93
CLDND1-227ENST00000513452 DECR1Q16698 335 aa9.26□□□□□ -0.93
CLDND1-227ENST00000513452 CYP27C1Q4G0S4 372 aa9.26□□□□□ -0.93
CLDND1-227ENST00000513452 IQCCQ4KMZ1 466 aa9.26□□□□□ -0.93
CLDND1-227ENST00000513452 TMEM108Q6UXF1 575 aa9.26□□□□□ -0.93
CLDND1-227ENST00000513452 Q6ZT83 130 aa9.26□□□□□ -0.93
CLDND1-227ENST00000513452 SEMA6DQ8NFY4 1073 aa9.26□□□□□ -0.93
CLDND1-227ENST00000513452 KCTD4Q8WVF5 259 aa9.26□□□□□ -0.93
CLDND1-227ENST00000513452 EXOSC8Q96B26 276 aaKnown RBP9.26□□□□□ -0.93
CLDND1-227ENST00000513452 PBKQ96KB5 322 aa9.26□□□□□ -0.93
CLDND1-227ENST00000513452 KLHL15Q96M94 604 aa9.26□□□□□ -0.93
CLDND1-227ENST00000513452 CPNE1Q99829 537 aa9.26□□□□□ -0.93
CLDND1-227ENST00000513452 SRXN1Q9BYN0 137 aa9.26□□□□□ -0.93
CLDND1-227ENST00000513452 NOL11Q9H8H0 719 aaKnown RBP9.26□□□□□ -0.93
CLDND1-227ENST00000513452 PRSS50Q9UI38 385 aa9.26□□□□□ -0.93
CLDND1-227ENST00000513452 MGAT4BQ9UQ53 548 aa9.26□□□□□ -0.93
CLDND1-227ENST00000513452 FKBP7Q9Y680 259 aa9.26□□□□□ -0.93
CLDND1-227ENST00000513452 A0A1W2PRB8 838 aa9.25□□□□□ -0.93
CLDND1-227ENST00000513452 NDUFS8O00217 210 aa9.25□□□□□ -0.93
CLDND1-227ENST00000513452 OR7A17O14581 309 aa9.25□□□□□ -0.93
CLDND1-227ENST00000513452 PLOD3O60568 738 aa9.25□□□□□ -0.93
CLDND1-227ENST00000513452 COQ9O75208 318 aa9.25□□□□□ -0.93
CLDND1-227ENST00000513452 UTS2O95399 124 aa9.25□□□□□ -0.93
CLDND1-227ENST00000513452 YES1P07947 543 aa9.25□□□□□ -0.93
CLDND1-227ENST00000513452 DHRS4L1P0CG22 281 aa9.25□□□□□ -0.93
CLDND1-227ENST00000513452 BMP4P12644 408 aa9.25□□□□□ -0.93
CLDND1-227ENST00000513452 ZNF23P17027 643 aa9.25□□□□□ -0.93
CLDND1-227ENST00000513452 GGT1P19440 569 aa9.25□□□□□ -0.93
CLDND1-227ENST00000513452 PSMA4P25789 261 aaKnown RBP9.25□□□□□ -0.93
CLDND1-227ENST00000513452 SHC1P29353 583 aa9.25□□□□□ -0.93
CLDND1-227ENST00000513452 GP5P40197 560 aa9.25□□□□□ -0.93
CLDND1-227ENST00000513452 COMPP49747 757 aaPredicted RBP9.25□□□□□ -0.93
CLDND1-227ENST00000513452 ZNF41P51814 821 aaPredicted RBP9.25□□□□□ -0.93
CLDND1-227ENST00000513452 CCNG1P51959 295 aa9.25□□□□□ -0.93
CLDND1-227ENST00000513452 DEFA6Q01524 100 aa9.25□□□□□ -0.93
CLDND1-227ENST00000513452 CHRNB3Q05901 458 aa9.25□□□□□ -0.93
CLDND1-227ENST00000513452 IFT88Q13099 833 aa9.25□□□□□ -0.93
CLDND1-227ENST00000513452 PLPPR5Q32ZL2 321 aa9.25□□□□□ -0.93
CLDND1-227ENST00000513452 GRAMD1BQ3KR37 738 aa9.25□□□□□ -0.93
CLDND1-227ENST00000513452 TIMM23BQ5SRD1 257 aa9.25□□□□□ -0.93
CLDND1-227ENST00000513452 ZNF544Q6NX49 715 aa9.25□□□□□ -0.93
CLDND1-227ENST00000513452 APOOLQ6UXV4 268 aa9.25□□□□□ -0.93
CLDND1-227ENST00000513452 RINLQ6ZS11 566 aa9.25□□□□□ -0.93
CLDND1-227ENST00000513452 ZBED8Q8IZ13 594 aa9.25□□□□□ -0.93
CLDND1-227ENST00000513452 FAM9CQ8IZT9 166 aa9.25□□□□□ -0.93
CLDND1-227ENST00000513452 LILRA2Q8N149 483 aa9.25□□□□□ -0.93
CLDND1-227ENST00000513452 C1orf52Q8N6N3 182 aaKnown RBP9.25□□□□□ -0.93
CLDND1-227ENST00000513452 GATSQ8NAP1 163 aa9.25□□□□□ -0.93
CLDND1-227ENST00000513452 ZFAND2BQ8WV99 257 aa9.25□□□□□ -0.93
CLDND1-227ENST00000513452 CDKL2Q92772 493 aa9.25□□□□□ -0.93
CLDND1-227ENST00000513452 GCDHQ92947 438 aaPredicted RBP9.25□□□□□ -0.93
CLDND1-227ENST00000513452 ATP6V1E2Q96A05 226 aa9.25□□□□□ -0.93
CLDND1-227ENST00000513452 CPNE4Q96A23 557 aaPredicted RBP9.25□□□□□ -0.93
CLDND1-227ENST00000513452 ZBTB8AQ96BR9 441 aa9.25□□□□□ -0.93
CLDND1-227ENST00000513452 FOXN4Q96NZ1 517 aa9.25□□□□□ -0.93
CLDND1-227ENST00000513452 TRMOQ9BU70 441 aa9.25□□□□□ -0.93
CLDND1-227ENST00000513452 BHLHE41Q9C0J9 482 aaPredicted RBP9.25□□□□□ -0.93
CLDND1-227ENST00000513452 ELOVL6Q9H5J4 265 aa9.25□□□□□ -0.93
CLDND1-227ENST00000513452 Q9N2J8 555 aa9.25□□□□□ -0.93
CLDND1-227ENST00000513452 FARSBQ9NSD9 589 aaKnown RBP9.25□□□□□ -0.93
CLDND1-227ENST00000513452 GIMAP4Q9NUV9 329 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms