RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 RFPL3O75679 317 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 F3P13726 295 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 GKP32189 559 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 RHOBP62745 196 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 HSD17B12Q53GQ0 312 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 AADACL3Q5VUY0 350 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 HACD4Q5VWC8 232 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 OR4F3Q6IEY1 312 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 SYT13Q7L8C5 426 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 TRABD2AQ86V40 505 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 DTWD1Q8N5C7 304 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 OR2T4Q8NH00 348 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 MITD1Q8WV92 249 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 GTF2H4Q92759 462 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 PEX13Q92968 403 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 MRPL38Q96DV4 380 aaKnown RBP8.44□□□□□ -1.06
VCAN-208ENST00000512590 CHST7Q9NS84 486 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 ZFP57Q9NU63 452 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 TMEM45AQ9NWC5 275 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 LUZP4Q9P127 313 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 USP36Q9P275 1121 aaKnown RBP8.44□□□□□ -1.06
VCAN-208ENST00000512590 DLGAP4Q9Y2H0 992 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 SGK494L7N484 410 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 XRCC2O43543 280 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 BMP1P13497 986 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 RAB3AP20336 220 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 F8A1P23610 371 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 LMO2P25791 158 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 MRPL19P49406 292 aaKnown RBP8.44□□□□□ -1.06
VCAN-208ENST00000512590 CES4AQ5XG92 561 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 OR4C11Q6IEV9 310 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 SFXN4Q6P4A7 337 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 PAPD4Q6PIY7 484 aaKnown RBP8.44□□□□□ -1.06
VCAN-208ENST00000512590 TMPRSS12Q86WS5 348 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 NTAN1Q96AB6 310 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 TSSK2Q96PF2 358 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 TUBG2Q9NRH3 451 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 ANKRD10Q9NXR5 420 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 SAGE1Q9NXZ1 904 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 SLC6A5Q9Y345 797 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 LSM5Q9Y4Y9 91 aaKnown RBP8.44□□□□□ -1.06
VCAN-208ENST00000512590 AHCYL1O43865 530 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 RASAL1O95294 804 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 PF4P02776 101 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 C7P10643 843 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 TAS2R39P59534 338 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 PLEKHS1Q5SXH7 462 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 ADIPOR2Q86V24 386 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 XYLT1Q86Y38 959 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 OR52B6Q8NGF0 335 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 GRAMD2BQ96HH9 432 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 IL4I1Q96RQ9 567 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 CCDC32Q9BV29 185 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 ST6GALNAC5Q9BVH7 336 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 DNAJC18Q9H819 358 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 SMOXQ9NWM0 555 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 ZDHHC9Q9Y397 364 aa8.44□□□□□ -1.06
VCAN-208ENST00000512590 PTPRMP28827 1452 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 A0A0A6YYC8 382 aaPredicted RBP8.43□□□□□ -1.06
VCAN-208ENST00000512590 SERTM2A0A1B0GWG4 89 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 I3L1I5 382 aaPredicted RBP8.43□□□□□ -1.06
VCAN-208ENST00000512590 ZNF821O75541 412 aaPredicted RBP8.43□□□□□ -1.06
VCAN-208ENST00000512590 OR2J3O76001 311 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 S1PR4O95977 384 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 SERPINA2P20848 420 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 SSTR4P31391 388 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 ARHGAP11AQ6P4F7 1023 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 ZNF546Q86UE3 836 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 OR51A7Q8NH64 312 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 SEC22AQ96IW7 307 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 SAMD8Q96LT4 415 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 MENTQ9BUN1 341 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 LANCL2Q9NS86 450 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 SIRT5Q9NXA8 310 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 LOXL2Q9Y4K0 774 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 PCDHGA7Q9Y5G6 932 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 ZNF609O15014 1411 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 hCG_1818297A0A087WSY0 165 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 AQP7O14520 342 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 HSPB6O14558 160 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 TSPAN15O95858 294 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 CTSAP10619 480 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 CEBPBP17676 345 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 S100A4P26447 101 aaKnown RBP8.43□□□□□ -1.06
VCAN-208ENST00000512590 NMBRP28336 390 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 CD1CP29017 333 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 LIPNQ5VXI9 398 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 RNF130Q86XS8 419 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 CARFQ8N187 725 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 ZNF784Q8NCA9 323 aaPredicted RBP8.43□□□□□ -1.06
VCAN-208ENST00000512590 DEFB108BQ8NET1 73 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 LGALS12Q96DT0 336 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 PINK1Q9BXM7 581 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 CD244Q9BZW8 370 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 ZDHHC5Q9C0B5 715 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 TINAGL1Q9GZM7 467 aaPredicted RBP8.43□□□□□ -1.06
VCAN-208ENST00000512590 AUP1Q9Y679 476 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 CLIC1O00299 241 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 LATO43561 262 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 ABHD16AO95870 558 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms