RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 RPL38P63173 70 aaKnown RBP13.21□□□□□ -0.29
CCHCR1-229ENST00000512418 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.21□□□□□ -0.29
CCHCR1-229ENST00000512418 RFTN2Q52LD8 501 aaPredicted RBP13.21□□□□□ -0.29
CCHCR1-229ENST00000512418 ZNF385BQ569K4 471 aa13.21□□□□□ -0.29
CCHCR1-229ENST00000512418 GALNT10Q86SR1 603 aa13.21□□□□□ -0.29
CCHCR1-229ENST00000512418 EXOC3L1Q86VI1 746 aa13.21□□□□□ -0.29
CCHCR1-229ENST00000512418 C10orf107Q8IVU9 208 aa13.21□□□□□ -0.29
CCHCR1-229ENST00000512418 ZNF610Q8N9Z0 462 aa13.21□□□□□ -0.29
CCHCR1-229ENST00000512418 NUP43Q8NFH3 380 aa13.21□□□□□ -0.29
CCHCR1-229ENST00000512418 OR4C3Q8NH37 302 aa13.21□□□□□ -0.29
CCHCR1-229ENST00000512418 SLC9A6Q92581 669 aa13.21□□□□□ -0.29
CCHCR1-229ENST00000512418 CAVIN3Q969G5 261 aa13.21□□□□□ -0.29
CCHCR1-229ENST00000512418 PIGTQ969N2 578 aa13.21□□□□□ -0.29
CCHCR1-229ENST00000512418 GIMAP5Q96F15 307 aa13.21□□□□□ -0.29
CCHCR1-229ENST00000512418 PIK3IP1Q96FE7 263 aa13.21□□□□□ -0.29
CCHCR1-229ENST00000512418 TUBB1Q9H4B7 451 aa13.21□□□□□ -0.29
CCHCR1-229ENST00000512418 PAQR5Q9NXK6 330 aaPredicted RBP13.21□□□□□ -0.29
CCHCR1-229ENST00000512418 EMC9Q9Y3B6 208 aa13.21□□□□□ -0.29
CCHCR1-229ENST00000512418 FIS1Q9Y3D6 152 aa13.21□□□□□ -0.29
CCHCR1-229ENST00000512418 UQCRHLA0A096LP55 91 aa13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 C7orf72A4D263 438 aa13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 LSM1O15116 133 aaKnown RBP13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 AKAP10O43572 662 aa13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 INHBBP09529 407 aa13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 ACP2P11117 423 aa13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 HPGDP15428 266 aa13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 DDX5P17844 614 aaKnown RBP13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 FPR1P21462 350 aa13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 TBXA2RP21731 343 aa13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 ADSLP30566 484 aaPredicted RBP13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 LCN1P31025 176 aa13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 ASMTP46597 345 aa13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 PCLAFQ15004 111 aa13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 DUSP5Q16690 384 aa13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 KANK2Q63ZY3 851 aa13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 PPP4R4Q6NUP7 873 aa13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 MFSD12Q6NUT3 480 aa13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 ZCCHC12Q6PEW1 402 aa13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 ZNF550Q7Z398 422 aa13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 MISPQ8IVT2 679 aa13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 WDR75Q8IWA0 830 aaKnown RBP13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 C4orf33Q8N1A6 199 aa13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 LRRC75A-AS1Q8N1F1 130 aa13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 GTPBP8Q8N3Z3 284 aaPredicted RBP13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 SLC16A11Q8NCK7 471 aa13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 OR6Y1Q8NGX8 325 aa13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 OR6K3Q8NGY3 331 aa13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 CLHC1Q8NHS4 586 aa13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 FBXO30Q8TB52 745 aa13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 FAM110BQ8TC76 370 aa13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 ACTRT2Q8TDY3 377 aa13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 EPS8L3Q8TE67 593 aaKnown RBP13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 ZBTB8AQ96BR9 441 aa13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 MTERF3Q96E29 417 aa13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 GMPPAQ96IJ6 420 aaPredicted RBP13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 MARK4Q96L34 752 aa13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 GATA5Q9BWX5 397 aaPredicted RBP13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 PRRG4Q9BZD6 226 aa13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 BAIAP2L1Q9UHR4 511 aa13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 MCTS1Q9ULC4 181 aaKnown RBP13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 DNAJC15Q9Y5T4 150 aa13.2□□□□□ -0.3
CCHCR1-229ENST00000512418 A0A1W2PRB8 838 aa13.19□□□□□ -0.3
CCHCR1-229ENST00000512418 TRIM13O60858 407 aa13.19□□□□□ -0.3
CCHCR1-229ENST00000512418 SMPD2O60906 423 aa13.19□□□□□ -0.3
CCHCR1-229ENST00000512418 KCNK2O95069 426 aa13.19□□□□□ -0.3
CCHCR1-229ENST00000512418 HSPA4LO95757 839 aa13.19□□□□□ -0.3
CCHCR1-229ENST00000512418 PLGP00747 810 aaPredicted RBP13.19□□□□□ -0.3
CCHCR1-229ENST00000512418 LINC00032P0C843 101 aa13.19□□□□□ -0.3
CCHCR1-229ENST00000512418 SLC6A8P48029 635 aa13.19□□□□□ -0.3
CCHCR1-229ENST00000512418 SERPINB4P48594 390 aa13.19□□□□□ -0.3
CCHCR1-229ENST00000512418 ZNF41P51814 821 aaPredicted RBP13.19□□□□□ -0.3
CCHCR1-229ENST00000512418 SLC18A2Q05940 514 aa13.19□□□□□ -0.3
CCHCR1-229ENST00000512418 ACKR1Q16570 336 aa13.19□□□□□ -0.3
CCHCR1-229ENST00000512418 PLPPR5Q32ZL2 321 aa13.19□□□□□ -0.3
CCHCR1-229ENST00000512418 GALNTL6Q49A17 601 aa13.19□□□□□ -0.3
CCHCR1-229ENST00000512418 Q5PR19 223 aa13.19□□□□□ -0.3
CCHCR1-229ENST00000512418 FIGNL1Q6PIW4 674 aa13.19□□□□□ -0.3
CCHCR1-229ENST00000512418 R3HCC1LQ7Z5L2 792 aaKnown RBP13.19□□□□□ -0.3
CCHCR1-229ENST00000512418 P3H2Q8IVL5 708 aa13.19□□□□□ -0.3
CCHCR1-229ENST00000512418 GATSQ8NAP1 163 aa13.19□□□□□ -0.3
CCHCR1-229ENST00000512418 OR10D3Q8NH80 312 aa13.19□□□□□ -0.3
CCHCR1-229ENST00000512418 ZC3HAV1LQ96H79 300 aaKnown RBP13.19□□□□□ -0.3
CCHCR1-229ENST00000512418 ADGRG7Q96K78 797 aa13.19□□□□□ -0.3
CCHCR1-229ENST00000512418 CCL19Q99731 98 aa13.19□□□□□ -0.3
CCHCR1-229ENST00000512418 KLHL4Q9C0H6 718 aa13.19□□□□□ -0.3
CCHCR1-229ENST00000512418 UBTD1Q9HAC8 227 aa13.19□□□□□ -0.3
CCHCR1-229ENST00000512418 UBQLN4Q9NRR5 601 aa13.19□□□□□ -0.3
CCHCR1-229ENST00000512418 MED17Q9NVC6 651 aa13.19□□□□□ -0.3
CCHCR1-229ENST00000512418 MKS1Q9NXB0 559 aa13.19□□□□□ -0.3
CCHCR1-229ENST00000512418 A0A1W2PQD3 144 aa13.18□□□□□ -0.3
CCHCR1-229ENST00000512418 TMEM114B3SHH9 223 aa13.18□□□□□ -0.3
CCHCR1-229ENST00000512418 SCDO00767 359 aa13.18□□□□□ -0.3
CCHCR1-229ENST00000512418 ADAMDEC1O15204 470 aa13.18□□□□□ -0.3
CCHCR1-229ENST00000512418 SS18L1O75177 396 aaPredicted RBP13.18□□□□□ -0.3
CCHCR1-229ENST00000512418 FGF4P08620 206 aa13.18□□□□□ -0.3
CCHCR1-229ENST00000512418 ALOX5P09917 674 aa13.18□□□□□ -0.3
CCHCR1-229ENST00000512418 PPP3CBP16298 524 aa13.18□□□□□ -0.3
CCHCR1-229ENST00000512418 IL11P20809 199 aa13.18□□□□□ -0.3
CCHCR1-229ENST00000512418 PSMA4P25789 261 aaKnown RBP13.18□□□□□ -0.3
CCHCR1-229ENST00000512418 PRIM2P49643 509 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms