RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 BTBD2Q9BX70 525 aa12.02□□□□□ -0.49
RNF4-215ENST00000511843 ACTRT3Q9BYD9 372 aa12.02□□□□□ -0.49
RNF4-215ENST00000511843 DPY30Q9C005 99 aa12.02□□□□□ -0.49
RNF4-215ENST00000511843 NKIRAS1Q9NYS0 192 aa12.02□□□□□ -0.49
RNF4-215ENST00000511843 FAF1Q9UNN5 650 aaPredicted RBP12.02□□□□□ -0.49
RNF4-215ENST00000511843 VDAC3Q9Y277 283 aa12.02□□□□□ -0.49
RNF4-215ENST00000511843 ZNF337Q9Y3M9 751 aa12.02□□□□□ -0.49
RNF4-215ENST00000511843 MPDZO75970 2070 aa12.02□□□□□ -0.49
RNF4-215ENST00000511843 OR2M5A3KFT3 312 aa12.01□□□□□ -0.49
RNF4-215ENST00000511843 MBD3L4A6NDZ8 208 aaPredicted RBP12.01□□□□□ -0.49
RNF4-215ENST00000511843 MBD3L3A6NE82 208 aaPredicted RBP12.01□□□□□ -0.49
RNF4-215ENST00000511843 MBD3L5A6NJ08 208 aaPredicted RBP12.01□□□□□ -0.49
RNF4-215ENST00000511843 ALG1L2C9J202 215 aa12.01□□□□□ -0.49
RNF4-215ENST00000511843 FAM47E-STBD1D6RA91 191 aa12.01□□□□□ -0.49
RNF4-215ENST00000511843 H3BML4 177 aa12.01□□□□□ -0.49
RNF4-215ENST00000511843 ANKRD28O15084 1053 aa12.01□□□□□ -0.49
RNF4-215ENST00000511843 SEC14L5O43304 696 aa12.01□□□□□ -0.49
RNF4-215ENST00000511843 OIP5O43482 229 aa12.01□□□□□ -0.49
RNF4-215ENST00000511843 NDUFB5O43674 189 aa12.01□□□□□ -0.49
RNF4-215ENST00000511843 SNUPNO95149 360 aaKnown RBP12.01□□□□□ -0.49
RNF4-215ENST00000511843 CPSF4O95639 269 aaKnown RBP12.01□□□□□ -0.49
RNF4-215ENST00000511843 POU3F2P20265 443 aaPredicted RBP12.01□□□□□ -0.49
RNF4-215ENST00000511843 TBXA2RP21731 343 aa12.01□□□□□ -0.49
RNF4-215ENST00000511843 CHMP24386 653 aa12.01□□□□□ -0.49
RNF4-215ENST00000511843 UQCRC1P31930 480 aa12.01□□□□□ -0.49
RNF4-215ENST00000511843 SUCLG1P53597 346 aaKnown RBP12.01□□□□□ -0.49
RNF4-215ENST00000511843 CLDN15P56746 228 aa12.01□□□□□ -0.49
RNF4-215ENST00000511843 TLE4Q04727 773 aa12.01□□□□□ -0.49
RNF4-215ENST00000511843 C17orf67Q0P5P2 114 aa12.01□□□□□ -0.49
RNF4-215ENST00000511843 SPANXN4Q5MJ08 99 aa12.01□□□□□ -0.49
RNF4-215ENST00000511843 DCST2Q5T1A1 773 aa12.01□□□□□ -0.49
RNF4-215ENST00000511843 ZCCHC12Q6PEW1 402 aa12.01□□□□□ -0.49
RNF4-215ENST00000511843 WDR75Q8IWA0 830 aaKnown RBP12.01□□□□□ -0.49
RNF4-215ENST00000511843 DMRTC2Q8IXT2 367 aaPredicted RBP12.01□□□□□ -0.49
RNF4-215ENST00000511843 OR56A1Q8NGH5 318 aa12.01□□□□□ -0.49
RNF4-215ENST00000511843 MBD3L2Q8NHZ7 208 aaPredicted RBP12.01□□□□□ -0.49
RNF4-215ENST00000511843 SFXN5Q8TD22 340 aa12.01□□□□□ -0.49
RNF4-215ENST00000511843 ADAMTS15Q8TE58 950 aa12.01□□□□□ -0.49
RNF4-215ENST00000511843 INTS12Q96CB8 462 aaKnown RBP12.01□□□□□ -0.49
RNF4-215ENST00000511843 LURAP1Q96LR2 239 aa12.01□□□□□ -0.49
RNF4-215ENST00000511843 OR7D2Q96RA2 312 aa12.01□□□□□ -0.49
RNF4-215ENST00000511843 STACQ99469 402 aa12.01□□□□□ -0.49
RNF4-215ENST00000511843 SH3GL2Q99962 352 aa12.01□□□□□ -0.49
RNF4-215ENST00000511843 PIGUQ9H490 435 aa12.01□□□□□ -0.49
RNF4-215ENST00000511843 PTGES2Q9H7Z7 377 aa12.01□□□□□ -0.49
RNF4-215ENST00000511843 CALHM2Q9HA72 323 aa12.01□□□□□ -0.49
RNF4-215ENST00000511843 DUSP22Q9NRW4 184 aa12.01□□□□□ -0.49
RNF4-215ENST00000511843 THAP1Q9NVV9 213 aa12.01□□□□□ -0.49
RNF4-215ENST00000511843 CLCF1Q9UBD9 225 aa12.01□□□□□ -0.49
RNF4-215ENST00000511843 MRPS18CQ9Y3D5 142 aaKnown RBP12.01□□□□□ -0.49
RNF4-215ENST00000511843 CSMD2Q7Z408 3487 aa12.01□□□□□ -0.49
RNF4-215ENST00000511843 IGLV3-32A0A0A0MS00 114 aa12□□□□□ -0.49
RNF4-215ENST00000511843 RNF103-CHMP3A0A140T963 221 aa12□□□□□ -0.49
RNF4-215ENST00000511843 EEF1E1-BLOC1S5C9J1V9 151 aa12□□□□□ -0.49
RNF4-215ENST00000511843 RNASET2O00584 256 aaKnown RBP12□□□□□ -0.49
RNF4-215ENST00000511843 DVL2O14641 736 aa12□□□□□ -0.49
RNF4-215ENST00000511843 EEF1E1O43324 174 aaKnown RBP12□□□□□ -0.49
RNF4-215ENST00000511843 SCN2BO60939 215 aa12□□□□□ -0.49
RNF4-215ENST00000511843 TGM6O95932 706 aa12□□□□□ -0.49
RNF4-215ENST00000511843 OPN1LWP04000 364 aa12□□□□□ -0.49
RNF4-215ENST00000511843 TMIGD3P0DMS9 266 aaPredicted RBP12□□□□□ -0.49
RNF4-215ENST00000511843 IL12AP29459 219 aa12□□□□□ -0.49
RNF4-215ENST00000511843 CLDN20P56880 219 aa12□□□□□ -0.49
RNF4-215ENST00000511843 UFM1P61960 85 aa12□□□□□ -0.49
RNF4-215ENST00000511843 OCRLQ01968 901 aa12□□□□□ -0.49
RNF4-215ENST00000511843 SF3B4Q15427 424 aaKnown RBP eCLIP12□□□□□ -0.492e-8■■□□□ 11.9
RNF4-215ENST00000511843 NDUFAF6Q330K2 333 aa12□□□□□ -0.49
RNF4-215ENST00000511843 FAM174BQ3ZCQ3 159 aa12□□□□□ -0.49
RNF4-215ENST00000511843 DDX59Q5T1V6 619 aaKnown RBP eCLIP12□□□□□ -0.49
RNF4-215ENST00000511843 MAVSQ7Z434 540 aa12□□□□□ -0.49
RNF4-215ENST00000511843 C6orf120Q7Z4R8 191 aa12□□□□□ -0.49
RNF4-215ENST00000511843 ADGRE4PQ86SQ3 457 aa12□□□□□ -0.49
RNF4-215ENST00000511843 NATD1Q8N6N6 113 aa12□□□□□ -0.49
RNF4-215ENST00000511843 ARSGQ96EG1 525 aa12□□□□□ -0.49
RNF4-215ENST00000511843 MANSC1Q9H8J5 431 aa12□□□□□ -0.49
RNF4-215ENST00000511843 NEUROD4Q9HD90 331 aa12□□□□□ -0.49
RNF4-215ENST00000511843 AIG1Q9NVV5 245 aa12□□□□□ -0.49
RNF4-215ENST00000511843 SCDO00767 359 aa11.99□□□□□ -0.49
RNF4-215ENST00000511843 HDAC3O15379 428 aa11.99□□□□□ -0.49
RNF4-215ENST00000511843 NGFRP08138 427 aa11.99□□□□□ -0.49
RNF4-215ENST00000511843 HPGDP15428 266 aa11.99□□□□□ -0.49
RNF4-215ENST00000511843 ATP6V1C1P21283 382 aa11.99□□□□□ -0.49
RNF4-215ENST00000511843 MATN1P21941 496 aa11.99□□□□□ -0.49
RNF4-215ENST00000511843 CTSSP25774 331 aa11.99□□□□□ -0.49
RNF4-215ENST00000511843 SSTR2P30874 369 aa11.99□□□□□ -0.49
RNF4-215ENST00000511843 ASCL1P50553 236 aa11.99□□□□□ -0.49
RNF4-215ENST00000511843 MYBPHQ13203 477 aa11.99□□□□□ -0.49
RNF4-215ENST00000511843 GANABQ14697 944 aaKnown RBP11.99□□□□□ -0.49
RNF4-215ENST00000511843 SLC9B1Q4ZJI4 515 aa11.99□□□□□ -0.49
RNF4-215ENST00000511843 TTMPQ5BVD1 217 aa11.99□□□□□ -0.49
RNF4-215ENST00000511843 ATG16L1Q676U5 607 aa11.99□□□□□ -0.49
RNF4-215ENST00000511843 NXNQ6DKJ4 435 aa11.99□□□□□ -0.49
RNF4-215ENST00000511843 OGFOD2Q6N063 350 aa11.99□□□□□ -0.49
RNF4-215ENST00000511843 GRAMD2AQ8IUY3 354 aa11.99□□□□□ -0.49
RNF4-215ENST00000511843 LURAP1LQ8IV03 231 aa11.99□□□□□ -0.49
RNF4-215ENST00000511843 ZNF614Q8N883 585 aa11.99□□□□□ -0.49
RNF4-215ENST00000511843 OR8J2Q8NGG1 315 aa11.99□□□□□ -0.49
RNF4-215ENST00000511843 FIG4Q92562 907 aa11.99□□□□□ -0.49
RNF4-215ENST00000511843 DTNBP1Q96EV8 351 aa11.99□□□□□ -0.49
RNF4-215ENST00000511843 ZNF845Q96IR2 970 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms