RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 CHMP6Q96FZ7 201 aa20.73■□□□□ 0.91
SNF8-209ENST00000510558 ZIM3Q96PE6 472 aa20.73■□□□□ 0.91
SNF8-209ENST00000510558 STACQ99469 402 aa20.73■□□□□ 0.91
SNF8-209ENST00000510558 CXorf36Q9H7Y0 433 aa20.73■□□□□ 0.91
SNF8-209ENST00000510558 HHATLQ9HCP6 504 aa20.73■□□□□ 0.91
SNF8-209ENST00000510558 DUSP22Q9NRW4 184 aa20.73■□□□□ 0.91
SNF8-209ENST00000510558 F8P00451 2351 aa20.72■□□□□ 0.91
SNF8-209ENST00000510558 TUBAL3A6NHL2 446 aa20.72■□□□□ 0.91
SNF8-209ENST00000510558 SLC22A20A6NK97 555 aa20.72■□□□□ 0.91
SNF8-209ENST00000510558 H0YC42 278 aa20.72■□□□□ 0.91
SNF8-209ENST00000510558 SEC14L5O43304 696 aa20.72■□□□□ 0.91
SNF8-209ENST00000510558 G6PDP11413 515 aa20.72■□□□□ 0.91
SNF8-209ENST00000510558 CCT3P49368 545 aaKnown RBP20.72■□□□□ 0.91
SNF8-209ENST00000510558 SUCLG1P53597 346 aaKnown RBP20.72■□□□□ 0.91
SNF8-209ENST00000510558 TPD52P55327 224 aaPredicted RBP20.72■□□□□ 0.91
SNF8-209ENST00000510558 EEFSECP57772 596 aaKnown RBP20.72■□□□□ 0.91
SNF8-209ENST00000510558 EMX2Q04743 252 aa20.72■□□□□ 0.91
SNF8-209ENST00000510558 TESK1Q15569 626 aa20.72■□□□□ 0.91
SNF8-209ENST00000510558 LSM12Q3MHD2 195 aaKnown RBP20.72■□□□□ 0.91
SNF8-209ENST00000510558 TNFAIP8L3Q5GJ75 292 aa20.72■□□□□ 0.91
SNF8-209ENST00000510558 CDC73Q6P1J9 531 aa20.72■□□□□ 0.91
SNF8-209ENST00000510558 OR56A1Q8NGH5 318 aa20.72■□□□□ 0.91
SNF8-209ENST00000510558 SMPDL3BQ92485 455 aa20.72■□□□□ 0.91
SNF8-209ENST00000510558 NRGNQ92686 78 aa20.72■□□□□ 0.91
SNF8-209ENST00000510558 CDS1Q92903 461 aa20.72■□□□□ 0.91
SNF8-209ENST00000510558 ZBTB9Q96C00 473 aa20.72■□□□□ 0.91
SNF8-209ENST00000510558 PPP1R36Q96LQ0 422 aa20.72■□□□□ 0.91
SNF8-209ENST00000510558 RBM24Q9BX46 236 aaKnown RBP20.72■□□□□ 0.91
SNF8-209ENST00000510558 BTBD2Q9BX70 525 aa20.72■□□□□ 0.91
SNF8-209ENST00000510558 POLDIP3Q9BY77 421 aaKnown RBP20.72■□□□□ 0.91
SNF8-209ENST00000510558 BHLHE41Q9C0J9 482 aaPredicted RBP20.72■□□□□ 0.91
SNF8-209ENST00000510558 C20orf27Q9GZN8 174 aa20.72■□□□□ 0.91
SNF8-209ENST00000510558 PIGMQ9H3S5 423 aa20.72■□□□□ 0.91
SNF8-209ENST00000510558 PIGUQ9H490 435 aa20.72■□□□□ 0.91
SNF8-209ENST00000510558 UBQLN4Q9NRR5 601 aa20.72■□□□□ 0.91
SNF8-209ENST00000510558 RASSF1Q9NS23 344 aa20.72■□□□□ 0.91
SNF8-209ENST00000510558 NOP53Q9NZM5 478 aaKnown RBP20.72■□□□□ 0.91
SNF8-209ENST00000510558 VDAC3Q9Y277 283 aa20.72■□□□□ 0.91
SNF8-209ENST00000510558 RAP2CQ9Y3L5 183 aa20.72■□□□□ 0.91
SNF8-209ENST00000510558 AKAP9Q99996 3911 aa20.72■□□□□ 0.91
SNF8-209ENST00000510558 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.71■□□□□ 0.91
SNF8-209ENST00000510558 A0A1W2PNV4 684 aa20.71■□□□□ 0.91
SNF8-209ENST00000510558 FAM221AA4D161 298 aa20.71■□□□□ 0.91
SNF8-209ENST00000510558 A6NNC1 897 aa20.71■□□□□ 0.91
SNF8-209ENST00000510558 SHISA8B8ZZ34 492 aa20.71■□□□□ 0.91
SNF8-209ENST00000510558 TNFSF13O75888 250 aa20.71■□□□□ 0.91
SNF8-209ENST00000510558 HPGDP15428 266 aa20.71■□□□□ 0.91
SNF8-209ENST00000510558 CPA2P48052 419 aa20.71■□□□□ 0.91
SNF8-209ENST00000510558 CLDN20P56880 219 aa20.71■□□□□ 0.91
SNF8-209ENST00000510558 C21orf58P58505 322 aa20.71■□□□□ 0.91
SNF8-209ENST00000510558 EEF1A1P68104 462 aaKnown RBP20.71■□□□□ 0.91
SNF8-209ENST00000510558 TP53BP2Q13625 1128 aa20.71■□□□□ 0.91
SNF8-209ENST00000510558 TMEM44Q2T9K0 475 aa20.71■□□□□ 0.91
SNF8-209ENST00000510558 SMU1Q2TAY7 513 aa20.71■□□□□ 0.91
SNF8-209ENST00000510558 SPDYE7PQ495Y7 208 aa20.71■□□□□ 0.91
SNF8-209ENST00000510558 EEF1A1P5Q5VTE0 462 aa20.71■□□□□ 0.91
SNF8-209ENST00000510558 OR2A2Q6IF42 318 aa20.71■□□□□ 0.91
SNF8-209ENST00000510558 FIG4Q92562 907 aa20.71■□□□□ 0.91
SNF8-209ENST00000510558 DUSP26Q9BV47 211 aa20.71■□□□□ 0.91
SNF8-209ENST00000510558 PINK1Q9BXM7 581 aa20.71■□□□□ 0.91
SNF8-209ENST00000510558 ACTRT3Q9BYD9 372 aa20.71■□□□□ 0.91
SNF8-209ENST00000510558 NEUROD4Q9HD90 331 aa20.71■□□□□ 0.91
SNF8-209ENST00000510558 GIN1Q9NXP7 522 aa20.71■□□□□ 0.91
SNF8-209ENST00000510558 GALNT8Q9NY28 637 aa20.71■□□□□ 0.91
SNF8-209ENST00000510558 ASIC5Q9NY37 505 aa20.71■□□□□ 0.91
SNF8-209ENST00000510558 PACSIN3Q9UKS6 424 aa20.71■□□□□ 0.91
SNF8-209ENST00000510558 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.71■□□□□ 0.91
SNF8-209ENST00000510558 ACTL7BQ9Y614 415 aa20.71■□□□□ 0.91
SNF8-209ENST00000510558 AP4B1Q9Y6B7 739 aa20.71■□□□□ 0.91
SNF8-209ENST00000510558 AKAP6Q13023 2319 aa20.71■□□□□ 0.91
SNF8-209ENST00000510558 TEP1Q99973 2627 aaKnown RBP20.71■□□□□ 0.91
SNF8-209ENST00000510558 ESPNB1AK53 854 aa20.7■□□□□ 0.9
SNF8-209ENST00000510558 SCDO00767 359 aa20.7■□□□□ 0.9
SNF8-209ENST00000510558 TNFRSF21O75509 655 aa20.7■□□□□ 0.9
SNF8-209ENST00000510558 CRHP06850 196 aa20.7■□□□□ 0.9
SNF8-209ENST00000510558 TUBBP07437 444 aa20.7■□□□□ 0.9
SNF8-209ENST00000510558 MYZAPP0CAP1 466 aa20.7■□□□□ 0.9
SNF8-209ENST00000510558 CLDN8P56748 225 aa20.7■□□□□ 0.9
SNF8-209ENST00000510558 MPP2Q14168 576 aa20.7■□□□□ 0.9
SNF8-209ENST00000510558 CAMKMTQ7Z624 323 aa20.7■□□□□ 0.9
SNF8-209ENST00000510558 LINC01560Q8TB33 94 aa20.7■□□□□ 0.9
SNF8-209ENST00000510558 SFXN5Q8TD22 340 aa20.7■□□□□ 0.9
SNF8-209ENST00000510558 SORT1Q99523 831 aa20.7■□□□□ 0.9
SNF8-209ENST00000510558 CLEC4MQ9H2X3 399 aaPredicted RBP20.7■□□□□ 0.9
SNF8-209ENST00000510558 AKTIPQ9H8T0 292 aa20.7■□□□□ 0.9
SNF8-209ENST00000510558 KCNK9Q9NPC2 374 aa20.7■□□□□ 0.9
SNF8-209ENST00000510558 GPATCH2Q9NW75 528 aa20.7■□□□□ 0.9
SNF8-209ENST00000510558 FAF1Q9UNN5 650 aaPredicted RBP20.7■□□□□ 0.9
SNF8-209ENST00000510558 A0A087WZY1 265 aa20.69■□□□□ 0.9
SNF8-209ENST00000510558 A0A1W2PQD3 144 aa20.69■□□□□ 0.9
SNF8-209ENST00000510558 CFLARO15519 480 aa20.69■□□□□ 0.9
SNF8-209ENST00000510558 SNUPNO95149 360 aaKnown RBP20.69■□□□□ 0.9
SNF8-209ENST00000510558 KRT16P08779 473 aa20.69■□□□□ 0.9
SNF8-209ENST00000510558 EPXP11678 715 aa20.69■□□□□ 0.9
SNF8-209ENST00000510558 ZNF17P17021 662 aa20.69■□□□□ 0.9
SNF8-209ENST00000510558 BGNP21810 368 aa20.69■□□□□ 0.9
SNF8-209ENST00000510558 DNAJA1P31689 397 aaKnown RBP20.69■□□□□ 0.9
SNF8-209ENST00000510558 SLC1A6P48664 564 aa20.69■□□□□ 0.9
SNF8-209ENST00000510558 RPL14P50914 215 aaKnown RBP20.69■□□□□ 0.9
SNF8-209ENST00000510558 DAZAP2Q15038 168 aaPredicted RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms