RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 NKX2-6A6NCS4 301 aa14.61□□□□□ -0.07
PDLIM5-212ENST00000509333 FAM47E-STBD1D6RA91 191 aa14.61□□□□□ -0.07
PDLIM5-212ENST00000509333 NPIPB9F8W1W9 429 aa14.61□□□□□ -0.07
PDLIM5-212ENST00000509333 NDUFB5O43674 189 aa14.61□□□□□ -0.07
PDLIM5-212ENST00000509333 KRT16P08779 473 aa14.61□□□□□ -0.07
PDLIM5-212ENST00000509333 HK1P19367 917 aa14.61□□□□□ -0.07
PDLIM5-212ENST00000509333 UQCRC2P22695 453 aa14.61□□□□□ -0.07
PDLIM5-212ENST00000509333 MSX1P28360 303 aa14.61□□□□□ -0.07
PDLIM5-212ENST00000509333 GCKP35557 465 aa14.61□□□□□ -0.07
PDLIM5-212ENST00000509333 CLDN15P56746 228 aa14.61□□□□□ -0.07
PDLIM5-212ENST00000509333 CLDN18P56856 261 aa14.61□□□□□ -0.07
PDLIM5-212ENST00000509333 DPY19L1Q2PZI1 675 aa14.61□□□□□ -0.07
PDLIM5-212ENST00000509333 TMEM44Q2T9K0 475 aa14.61□□□□□ -0.07
PDLIM5-212ENST00000509333 FAM174BQ3ZCQ3 159 aa14.61□□□□□ -0.07
PDLIM5-212ENST00000509333 KLHL26Q53HC5 615 aa14.61□□□□□ -0.07
PDLIM5-212ENST00000509333 AP1ARQ63HQ0 302 aa14.61□□□□□ -0.07
PDLIM5-212ENST00000509333 ADGRE4PQ86SQ3 457 aa14.61□□□□□ -0.07
PDLIM5-212ENST00000509333 ZNF295-AS1Q8N0V1 137 aa14.61□□□□□ -0.07
PDLIM5-212ENST00000509333 C1GALT1C1Q96EU7 318 aa14.61□□□□□ -0.07
PDLIM5-212ENST00000509333 DTNBP1Q96EV8 351 aa14.61□□□□□ -0.07
PDLIM5-212ENST00000509333 CHMP6Q96FZ7 201 aa14.61□□□□□ -0.07
PDLIM5-212ENST00000509333 C7orf26Q96N11 449 aa14.61□□□□□ -0.07
PDLIM5-212ENST00000509333 SFXN2Q96NB2 322 aa14.61□□□□□ -0.07
PDLIM5-212ENST00000509333 OR52B2Q96RD2 323 aa14.61□□□□□ -0.07
PDLIM5-212ENST00000509333 SDF2Q99470 211 aa14.61□□□□□ -0.07
PDLIM5-212ENST00000509333 TREX2Q9BQ50 279 aaPredicted RBP14.61□□□□□ -0.07
PDLIM5-212ENST00000509333 TUBA1CQ9BQE3 449 aa14.61□□□□□ -0.07
PDLIM5-212ENST00000509333 HOXD1Q9GZZ0 328 aa14.61□□□□□ -0.07
PDLIM5-212ENST00000509333 ARGLU1Q9NWB6 273 aaPredicted RBP14.61□□□□□ -0.07
PDLIM5-212ENST00000509333 BTNL2Q9UIR0 455 aa14.61□□□□□ -0.07
PDLIM5-212ENST00000509333 ZNF337Q9Y3M9 751 aa14.61□□□□□ -0.07
PDLIM5-212ENST00000509333 ADGRG4Q8IZF6 3080 aa14.61□□□□□ -0.07
PDLIM5-212ENST00000509333 A0A1W2PQD3 144 aa14.6□□□□□ -0.07
PDLIM5-212ENST00000509333 DUXAA6NLW8 204 aa14.6□□□□□ -0.07
PDLIM5-212ENST00000509333 HSPB2A8KAH6 182 aa14.6□□□□□ -0.07
PDLIM5-212ENST00000509333 HMGB1P1B2RPK0 211 aaPredicted RBP14.6□□□□□ -0.07
PDLIM5-212ENST00000509333 E9PBE3 544 aa14.6□□□□□ -0.07
PDLIM5-212ENST00000509333 SASH3O75995 380 aa14.6□□□□□ -0.07
PDLIM5-212ENST00000509333 SNRPB2P08579 225 aaKnown RBP14.6□□□□□ -0.07
PDLIM5-212ENST00000509333 ZNF708P17019 499 aa14.6□□□□□ -0.07
PDLIM5-212ENST00000509333 RPS26P62854 115 aaKnown RBP14.6□□□□□ -0.07
PDLIM5-212ENST00000509333 SRYQ05066 204 aa14.6□□□□□ -0.07
PDLIM5-212ENST00000509333 HSPB2Q16082 182 aa14.6□□□□□ -0.07
PDLIM5-212ENST00000509333 NXNQ6DKJ4 435 aa14.6□□□□□ -0.07
PDLIM5-212ENST00000509333 ARSKQ6UWY0 536 aa14.6□□□□□ -0.07
PDLIM5-212ENST00000509333 LACC1Q8IV20 430 aa14.6□□□□□ -0.07
PDLIM5-212ENST00000509333 NAXEQ8NCW5 288 aa14.6□□□□□ -0.07
PDLIM5-212ENST00000509333 OR5D16Q8NGK9 328 aa14.6□□□□□ -0.07
PDLIM5-212ENST00000509333 OR4A15Q8NGL6 344 aa14.6□□□□□ -0.07
PDLIM5-212ENST00000509333 MIPOL1Q8TD10 442 aa14.6□□□□□ -0.07
PDLIM5-212ENST00000509333 CCDC115Q96NT0 180 aa14.6□□□□□ -0.07
PDLIM5-212ENST00000509333 TRIB1Q96RU8 372 aa14.6□□□□□ -0.07
PDLIM5-212ENST00000509333 RUBCNLQ9H714 662 aa14.6□□□□□ -0.07
PDLIM5-212ENST00000509333 HHATLQ9HCP6 504 aa14.6□□□□□ -0.07
PDLIM5-212ENST00000509333 SLCO1B3Q9NPD5 702 aa14.6□□□□□ -0.07
PDLIM5-212ENST00000509333 NPDC1Q9NQX5 325 aaPredicted RBP14.6□□□□□ -0.07
PDLIM5-212ENST00000509333 DKKL1Q9UK85 242 aa14.6□□□□□ -0.07
PDLIM5-212ENST00000509333 USH1CQ9Y6N9 552 aa14.6□□□□□ -0.07
PDLIM5-212ENST00000509333 ABCA12Q86UK0 2595 aa14.6□□□□□ -0.07
PDLIM5-212ENST00000509333 OR2M5A3KFT3 312 aa14.59□□□□□ -0.07
PDLIM5-212ENST00000509333 C9JVG2 144 aa14.59□□□□□ -0.07
PDLIM5-212ENST00000509333 LINC01387J3KSC0 135 aa14.59□□□□□ -0.07
PDLIM5-212ENST00000509333 TGDSO95455 350 aa14.59□□□□□ -0.07
PDLIM5-212ENST00000509333 C1QCP02747 245 aa14.59□□□□□ -0.07
PDLIM5-212ENST00000509333 PGRP06401 933 aa14.59□□□□□ -0.07
PDLIM5-212ENST00000509333 PEPDP12955 493 aa14.59□□□□□ -0.07
PDLIM5-212ENST00000509333 TCEA1P23193 301 aaKnown RBP14.59□□□□□ -0.07
PDLIM5-212ENST00000509333 SUCLG1P53597 346 aaKnown RBP14.59□□□□□ -0.07
PDLIM5-212ENST00000509333 ATP12AP54707 1039 aa14.59□□□□□ -0.07
PDLIM5-212ENST00000509333 PPP2R2AP63151 447 aa14.59□□□□□ -0.07
PDLIM5-212ENST00000509333 GANABQ14697 944 aaKnown RBP14.59□□□□□ -0.07
PDLIM5-212ENST00000509333 PDCD4Q53EL6 469 aaKnown RBP14.59□□□□□ -0.07
PDLIM5-212ENST00000509333 DCST2Q5T1A1 773 aa14.59□□□□□ -0.07
PDLIM5-212ENST00000509333 GLB1L3Q8NCI6 653 aaPredicted RBP14.59□□□□□ -0.07
PDLIM5-212ENST00000509333 CHDHQ8NE62 594 aaPredicted RBP14.59□□□□□ -0.07
PDLIM5-212ENST00000509333 OR5M1Q8NGP8 315 aa14.59□□□□□ -0.07
PDLIM5-212ENST00000509333 LRRC8CQ8TDW0 803 aa14.59□□□□□ -0.07
PDLIM5-212ENST00000509333 OR52E6Q96RD3 313 aa14.59□□□□□ -0.07
PDLIM5-212ENST00000509333 KLHDC3Q9BQ90 382 aa14.59□□□□□ -0.07
PDLIM5-212ENST00000509333 SDR39U1Q9NRG7 319 aaPredicted RBP14.59□□□□□ -0.07
PDLIM5-212ENST00000509333 ZNF629Q9UEG4 869 aaPredicted RBP14.59□□□□□ -0.07
PDLIM5-212ENST00000509333 ARHGAP21Q5T5U3 1957 aa14.59□□□□□ -0.07
PDLIM5-212ENST00000509333 RNF103-CHMP3A0A140T963 221 aa14.58□□□□□ -0.08
PDLIM5-212ENST00000509333 MBD3L4A6NDZ8 208 aaPredicted RBP14.58□□□□□ -0.08
PDLIM5-212ENST00000509333 MBD3L3A6NE82 208 aaPredicted RBP14.58□□□□□ -0.08
PDLIM5-212ENST00000509333 CCDC154A6NI56 674 aa14.58□□□□□ -0.08
PDLIM5-212ENST00000509333 MBD3L5A6NJ08 208 aaPredicted RBP14.58□□□□□ -0.08
PDLIM5-212ENST00000509333 FAM90A27PA6NNH2 459 aa14.58□□□□□ -0.08
PDLIM5-212ENST00000509333 SYT5O00445 386 aa14.58□□□□□ -0.08
PDLIM5-212ENST00000509333 SCDO00767 359 aa14.58□□□□□ -0.08
PDLIM5-212ENST00000509333 UBDO15205 165 aa14.58□□□□□ -0.08
PDLIM5-212ENST00000509333 FCMRO60667 390 aa14.58□□□□□ -0.08
PDLIM5-212ENST00000509333 SLC22A3O75751 556 aa14.58□□□□□ -0.08
PDLIM5-212ENST00000509333 IL2RAP01589 272 aa14.58□□□□□ -0.08
PDLIM5-212ENST00000509333 COX6B1P14854 86 aa14.58□□□□□ -0.08
PDLIM5-212ENST00000509333 IDO1P14902 403 aa14.58□□□□□ -0.08
PDLIM5-212ENST00000509333 HPGDP15428 266 aa14.58□□□□□ -0.08
PDLIM5-212ENST00000509333 IGFBP2P18065 325 aa14.58□□□□□ -0.08
PDLIM5-212ENST00000509333 ATP6V1C1P21283 382 aa14.58□□□□□ -0.08
PDLIM5-212ENST00000509333 IDH3AP50213 366 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms