RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 KLRF1Q9NZS2 232 aa3.47□□□□□ -1.85
TOPBP1-206ENST00000508524 NRBP1Q9UHY1 535 aa3.47□□□□□ -1.85
TOPBP1-206ENST00000508524 LEF1Q9UJU2 399 aaPredicted RBP3.47□□□□□ -1.85
TOPBP1-206ENST00000508524 DIMT1Q9UNQ2 313 aaKnown RBP3.47□□□□□ -1.85
TOPBP1-206ENST00000508524 ATG2AQ2TAZ0 1938 aa3.46□□□□□ -1.85
TOPBP1-206ENST00000508524 KLF5Q13887 457 aaPredicted RBP3.46□□□□□ -1.86
TOPBP1-206ENST00000508524 RPS6KA1Q15418 735 aa3.46□□□□□ -1.86
TOPBP1-206ENST00000508524 HAGHQ16775 308 aa3.46□□□□□ -1.86
TOPBP1-206ENST00000508524 TYSND1Q2T9J0 566 aa3.46□□□□□ -1.86
TOPBP1-206ENST00000508524 KBTBD12Q3ZCT8 623 aa3.46□□□□□ -1.86
TOPBP1-206ENST00000508524 MPPE1Q53F39 396 aa3.46□□□□□ -1.86
TOPBP1-206ENST00000508524 KCTD11Q693B1 232 aa3.46□□□□□ -1.86
TOPBP1-206ENST00000508524 ADAMTSL5Q6ZMM2 481 aa3.46□□□□□ -1.86
TOPBP1-206ENST00000508524 STOX1Q6ZVD7 989 aa3.46□□□□□ -1.86
TOPBP1-206ENST00000508524 PRSS48Q7RTY5 328 aa3.46□□□□□ -1.86
TOPBP1-206ENST00000508524 GALNTL5Q7Z4T8 443 aa3.46□□□□□ -1.86
TOPBP1-206ENST00000508524 ADGRD2Q7Z7M1 963 aa3.46□□□□□ -1.86
TOPBP1-206ENST00000508524 CLYBLQ8N0X4 340 aa3.46□□□□□ -1.86
TOPBP1-206ENST00000508524 GLYATL1Q969I3 302 aa3.46□□□□□ -1.86
TOPBP1-206ENST00000508524 MRPL53Q96EL3 112 aaKnown RBP3.46□□□□□ -1.86
TOPBP1-206ENST00000508524 SDHCQ99643 169 aaPredicted RBP3.46□□□□□ -1.86
TOPBP1-206ENST00000508524 LCE3DQ9BYE3 92 aa3.46□□□□□ -1.86
TOPBP1-206ENST00000508524 NAPBQ9H115 298 aa3.46□□□□□ -1.86
TOPBP1-206ENST00000508524 RNPEPL1Q9HAU8 725 aa3.46□□□□□ -1.86
TOPBP1-206ENST00000508524 RPS6KB2Q9UBS0 482 aa3.46□□□□□ -1.86
TOPBP1-206ENST00000508524 KLHL21Q9UJP4 597 aa3.46□□□□□ -1.86
TOPBP1-206ENST00000508524 EMCNQ9ULC0 261 aa3.46□□□□□ -1.86
TOPBP1-206ENST00000508524 ITM2BQ9Y287 266 aa3.46□□□□□ -1.86
TOPBP1-206ENST00000508524 MYO9AB2RTY4 2548 aa3.46□□□□□ -1.86
TOPBP1-206ENST00000508524 ROBO3Q96MS0 1386 aa3.46□□□□□ -1.86
TOPBP1-206ENST00000508524 ABCA12Q86UK0 2595 aa3.46□□□□□ -1.86
TOPBP1-206ENST00000508524 A0A0A6YYC8 382 aaPredicted RBP3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 A4D1N5 150 aa3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 YJEFN3A6XGL0 299 aa3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 PANO1I0J062 215 aa3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 I3L1I5 382 aaPredicted RBP3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 SLC33A1O00400 549 aaPredicted RBP3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 MBTPS2O43462 519 aa3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 APBB3O95704 486 aa3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 GAS8O95995 478 aa3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 PGK2P07205 417 aa3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 WNT2P09544 360 aa3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 IGFBP5P24593 272 aa3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 ACP1P24666 158 aa3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 RIPPLY3P57055 190 aa3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 DEFB103AP81534 67 aa3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 ZNF33BQ06732 778 aa3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 GPNMBQ14956 572 aa3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 STXBP2Q15833 593 aa3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 TCEAL5Q5H9L2 206 aa3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 SLC22A10Q63ZE4 541 aa3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 WSCD1Q658N2 575 aa3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 MFSD7Q6UXD7 560 aa3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 DEFB128Q7Z7B8 93 aa3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 LINC00518Q8N0U6 118 aa3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 OR8H3Q8N146 312 aa3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 OR2L5Q8NG80 312 aa3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 ZNF799Q96GE5 643 aa3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 SPATA17Q96L03 361 aa3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 TECTBQ96PL2 329 aa3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 KIR2DL4Q99706 377 aa3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 FAM173AQ9BQD7 235 aa3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 JPH2Q9BR39 696 aaPredicted RBP3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 GPR174Q9BXC1 333 aa3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 ISG20L2Q9H9L3 353 aaKnown RBP3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 PNPLA3Q9NST1 481 aa3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 DDX28Q9NUL7 540 aaKnown RBP3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 TUBGCP4Q9UGJ1 667 aa3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 NUDCQ9Y266 331 aa3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 CA5BQ9Y2D0 317 aa3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 RNF115Q9Y4L5 304 aa3.45□□□□□ -1.86
TOPBP1-206ENST00000508524 ASTN1O14525 1302 aa3.44□□□□□ -1.86
TOPBP1-206ENST00000508524 ITPR3Q14573 2671 aa3.44□□□□□ -1.86
TOPBP1-206ENST00000508524 LOC730098B7Z3J9 87 aa3.44□□□□□ -1.86
TOPBP1-206ENST00000508524 NUDT21O43809 227 aaKnown RBP3.44□□□□□ -1.86
TOPBP1-206ENST00000508524 ASGR1P07306 291 aa3.44□□□□□ -1.86
TOPBP1-206ENST00000508524 HOXC4P09017 264 aaPredicted RBP3.44□□□□□ -1.86
TOPBP1-206ENST00000508524 HOXB7P09629 217 aa3.44□□□□□ -1.86
TOPBP1-206ENST00000508524 CT45A10P0DMU9 189 aa3.44□□□□□ -1.86
TOPBP1-206ENST00000508524 IDSP22304 550 aa3.44□□□□□ -1.86
TOPBP1-206ENST00000508524 XCR1P46094 333 aa3.44□□□□□ -1.86
TOPBP1-206ENST00000508524 ASIC1P78348 528 aa3.44□□□□□ -1.86
TOPBP1-206ENST00000508524 CDKL1Q00532 357 aa3.44□□□□□ -1.86
TOPBP1-206ENST00000508524 BEX3Q00994 111 aa3.44□□□□□ -1.86
TOPBP1-206ENST00000508524 CD47Q08722 323 aa3.44□□□□□ -1.86
TOPBP1-206ENST00000508524 OVGP1Q12889 678 aa3.44□□□□□ -1.86
TOPBP1-206ENST00000508524 EPC2Q52LR7 807 aa3.44□□□□□ -1.86
TOPBP1-206ENST00000508524 GPR65Q8IYL9 337 aa3.44□□□□□ -1.86
TOPBP1-206ENST00000508524 SIDT2Q8NBJ9 832 aaKnown RBP3.44□□□□□ -1.86
TOPBP1-206ENST00000508524 ACER1Q8TDN7 264 aa3.44□□□□□ -1.86
TOPBP1-206ENST00000508524 CFAP53Q96M91 514 aa3.44□□□□□ -1.86
TOPBP1-206ENST00000508524 C9orf85Q96MD7 179 aa3.44□□□□□ -1.86
TOPBP1-206ENST00000508524 MIEF1Q9NQG6 463 aa3.44□□□□□ -1.86
TOPBP1-206ENST00000508524 DDX49Q9Y6V7 483 aaKnown RBP3.44□□□□□ -1.86
TOPBP1-206ENST00000508524 ELP1O95163 1332 aa3.44□□□□□ -1.86
TOPBP1-206ENST00000508524 SPTAN1Q13813 2472 aaKnown RBP3.43□□□□□ -1.86
TOPBP1-206ENST00000508524 SIP14410 1827 aa3.43□□□□□ -1.86
TOPBP1-206ENST00000508524 A0A0U1RQG5 324 aaPredicted RBP3.43□□□□□ -1.86
TOPBP1-206ENST00000508524 PSMD3O43242 534 aa3.43□□□□□ -1.86
TOPBP1-206ENST00000508524 STX6O43752 255 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms