RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 VDAC3Q9Y277 283 aa11.7□□□□□ -0.54
HMGCS1-205ENST00000508319 AP4B1Q9Y6B7 739 aa11.7□□□□□ -0.54
HMGCS1-205ENST00000508319 ARID1AO14497 2285 aa11.7□□□□□ -0.54
HMGCS1-205ENST00000508319 NUP214P35658 2090 aaPredicted RBP11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 RAI1Q7Z5J4 1906 aaPredicted RBP11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 DEFB108AA8MXU0 73 aa11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 PIP5K1BO14986 540 aa11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 CTIFO43310 598 aaKnown RBP11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 EMC8O43402 210 aa11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 NPHS1O60500 1241 aa11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 AQP8O94778 261 aa11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 NUDT17P0C025 328 aa11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 CD8BP10966 210 aa11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 ZNF17P17021 662 aa11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 CD53P19397 219 aa11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 EFNA1P20827 205 aaPredicted RBP11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 TBXA2RP21731 343 aa11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 ALDH3A1P30838 453 aa11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 ARRB2P32121 409 aa11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 UGT2B10P36537 528 aa11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 PRKAG1P54619 331 aa11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 MANFP55145 182 aaKnown RBP11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 XKR7Q5GH72 579 aa11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 ARL13AQ5H913 290 aaPredicted RBP11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 FIGNL1Q6PIW4 674 aa11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 KRTAP1-3Q8IUG1 177 aa11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 DDIASQ8IXT1 998 aa11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 GTPBP8Q8N3Z3 284 aaPredicted RBP11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 GATSQ8NAP1 163 aa11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 WFDC11Q8NEX6 87 aa11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 FAM110BQ8TC76 370 aa11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 MTERF3Q96E29 417 aa11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 FAM120BQ96EK7 910 aaKnown RBP11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 OTUB1Q96FW1 271 aaPredicted RBP11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 C16orf58Q96GQ5 468 aa11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 ADGRG7Q96K78 797 aa11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 WFIKKN1Q96NZ8 548 aa11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 FAM111AQ96PZ2 611 aa11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 NPAS1Q99742 590 aa11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 KLHDC3Q9BQ90 382 aa11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 IQCGQ9H095 443 aaKnown RBP11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 ANKZF1Q9H8Y5 726 aa11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 SIRT3Q9NTG7 399 aaPredicted RBP11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 FBXO34Q9NWN3 711 aa11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 KLHL28Q9NXS3 571 aa11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 C6orf203Q9P0P8 240 aaPredicted RBP11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 SLC17A7Q9P2U7 560 aa11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 GIMAP2Q9UG22 337 aa11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 NDRG3Q9UGV2 375 aa11.69□□□□□ -0.54
HMGCS1-205ENST00000508319 TLDC2A0PJX2 215 aa11.68□□□□□ -0.54
HMGCS1-205ENST00000508319 C7orf72A4D263 438 aa11.68□□□□□ -0.54
HMGCS1-205ENST00000508319 CASKO14936 926 aa11.68□□□□□ -0.54
HMGCS1-205ENST00000508319 SCAMP2O15127 329 aaKnown RBP11.68□□□□□ -0.54
HMGCS1-205ENST00000508319 NDUFB5O43674 189 aa11.68□□□□□ -0.54
HMGCS1-205ENST00000508319 FGF4P08620 206 aa11.68□□□□□ -0.54
HMGCS1-205ENST00000508319 FCGR2AP12318 317 aa11.68□□□□□ -0.54
HMGCS1-205ENST00000508319 POU2F1P14859 743 aa11.68□□□□□ -0.54
HMGCS1-205ENST00000508319 PSMA4P25789 261 aaKnown RBP11.68□□□□□ -0.54
HMGCS1-205ENST00000508319 ASMTP46597 345 aa11.68□□□□□ -0.54
HMGCS1-205ENST00000508319 RPS3AP61247 264 aaKnown RBP11.68□□□□□ -0.54
HMGCS1-205ENST00000508319 FGFBP1Q14512 234 aa11.68□□□□□ -0.54
HMGCS1-205ENST00000508319 MLC1Q15049 377 aa11.68□□□□□ -0.54
HMGCS1-205ENST00000508319 CTU2Q2VPK5 515 aaKnown RBP11.68□□□□□ -0.54
HMGCS1-205ENST00000508319 PLPPR5Q32ZL2 321 aa11.68□□□□□ -0.54
HMGCS1-205ENST00000508319 RIBC1Q8N443 379 aaPredicted RBP11.68□□□□□ -0.54
HMGCS1-205ENST00000508319 OR6Y1Q8NGX8 325 aa11.68□□□□□ -0.54
HMGCS1-205ENST00000508319 AGR3Q8TD06 166 aa11.68□□□□□ -0.54
HMGCS1-205ENST00000508319 POM121Q96HA1 1249 aa11.68□□□□□ -0.54
HMGCS1-205ENST00000508319 ELOVL5Q9NYP7 299 aa11.68□□□□□ -0.54
HMGCS1-205ENST00000508319 LGALS13Q9UHV8 139 aa11.68□□□□□ -0.54
HMGCS1-205ENST00000508319 ATP6V1HQ9UI12 483 aa11.68□□□□□ -0.54
HMGCS1-205ENST00000508319 EIF3LQ9Y262 564 aaKnown RBP11.68□□□□□ -0.54
HMGCS1-205ENST00000508319 TRAF6Q9Y4K3 522 aa11.68□□□□□ -0.54
HMGCS1-205ENST00000508319 PRR14LQ5THK1 2151 aa11.67□□□□□ -0.54
HMGCS1-205ENST00000508319 A0A087WZY1 265 aa11.67□□□□□ -0.54
HMGCS1-205ENST00000508319 A0A1W2PRB8 838 aa11.67□□□□□ -0.54
HMGCS1-205ENST00000508319 EIF1AYO14602 144 aaKnown RBP11.67□□□□□ -0.54
HMGCS1-205ENST00000508319 SPAG7O75391 227 aa11.67□□□□□ -0.54
HMGCS1-205ENST00000508319 HMGN2P05204 90 aaKnown RBP11.67□□□□□ -0.54
HMGCS1-205ENST00000508319 ALOX5P09917 674 aa11.67□□□□□ -0.54
HMGCS1-205ENST00000508319 CRYGSP22914 178 aa11.67□□□□□ -0.54
HMGCS1-205ENST00000508319 HOXC12P31275 282 aa11.67□□□□□ -0.54
HMGCS1-205ENST00000508319 HPCAL1P37235 193 aa11.67□□□□□ -0.54
HMGCS1-205ENST00000508319 EIF1AXP47813 144 aaKnown RBP11.67□□□□□ -0.54
HMGCS1-205ENST00000508319 SLC6A8P48029 635 aa11.67□□□□□ -0.54
HMGCS1-205ENST00000508319 PTGR1Q14914 329 aa11.67□□□□□ -0.54
HMGCS1-205ENST00000508319 CD226Q15762 336 aa11.67□□□□□ -0.54
HMGCS1-205ENST00000508319 KRTAP21-3Q3LHN1 58 aa11.67□□□□□ -0.54
HMGCS1-205ENST00000508319 CCNJQ5T5M9 372 aa11.67□□□□□ -0.54
HMGCS1-205ENST00000508319 ZCCHC12Q6PEW1 402 aa11.67□□□□□ -0.54
HMGCS1-205ENST00000508319 LRIG3Q6UXM1 1119 aa11.67□□□□□ -0.54
HMGCS1-205ENST00000508319 ZCCHC23Q6ZST2 131 aa11.67□□□□□ -0.54
HMGCS1-205ENST00000508319 FAM214BQ7L5A3 538 aa11.67□□□□□ -0.54
HMGCS1-205ENST00000508319 R3HCC1LQ7Z5L2 792 aaKnown RBP11.67□□□□□ -0.54
HMGCS1-205ENST00000508319 CXorf67Q86X51 503 aaPredicted RBP11.67□□□□□ -0.54
HMGCS1-205ENST00000508319 COX18Q8N8Q8 333 aa11.67□□□□□ -0.54
HMGCS1-205ENST00000508319 OR7A2PQ8NGA2 310 aa11.67□□□□□ -0.54
HMGCS1-205ENST00000508319 OR10D3Q8NH80 312 aa11.67□□□□□ -0.54
HMGCS1-205ENST00000508319 PSMA8Q8TAA3 256 aa11.67□□□□□ -0.54
HMGCS1-205ENST00000508319 ACTRT2Q8TDY3 377 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms