RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 CLK3P49761 638 aaKnown RBP16.05■□□□□ 0.16
RNF4-209ENST00000507784 EEF1A1P68104 462 aaKnown RBP16.05■□□□□ 0.16
RNF4-209ENST00000507784 VLDLRP98155 873 aa16.05■□□□□ 0.16
RNF4-209ENST00000507784 CDC20Q12834 499 aa16.05■□□□□ 0.16
RNF4-209ENST00000507784 FGFBP1Q14512 234 aa16.05■□□□□ 0.16
RNF4-209ENST00000507784 MEP1AQ16819 746 aa16.05■□□□□ 0.16
RNF4-209ENST00000507784 MRPL2Q5T653 305 aaKnown RBP16.05■□□□□ 0.16
RNF4-209ENST00000507784 DEF8Q6ZN54 512 aa16.05■□□□□ 0.16
RNF4-209ENST00000507784 TMEM102Q8N9M5 508 aaPredicted RBP16.05■□□□□ 0.16
RNF4-209ENST00000507784 ARHGDIGQ99819 225 aa16.05■□□□□ 0.16
RNF4-209ENST00000507784 TBL1XR1Q9BZK7 514 aa16.05■□□□□ 0.16
RNF4-209ENST00000507784 AMBRA1Q9C0C7 1298 aa16.05■□□□□ 0.16
RNF4-209ENST00000507784 SEMA6AQ9H2E6 1030 aa16.05■□□□□ 0.16
RNF4-209ENST00000507784 IL1RAPQ9NPH3 570 aa16.05■□□□□ 0.16
RNF4-209ENST00000507784 RLIMQ9NVW2 624 aa16.05■□□□□ 0.16
RNF4-209ENST00000507784 STX18Q9P2W9 335 aaKnown RBP16.05■□□□□ 0.16
RNF4-209ENST00000507784 POLHQ9Y253 713 aa16.05■□□□□ 0.16
RNF4-209ENST00000507784 FAM32AQ9Y421 112 aaKnown RBP16.05■□□□□ 0.16
RNF4-209ENST00000507784 H3BNH8 94 aa16.04■□□□□ 0.16
RNF4-209ENST00000507784 SYT5O00445 386 aa16.04■□□□□ 0.16
RNF4-209ENST00000507784 SCO2O43819 266 aa16.04■□□□□ 0.16
RNF4-209ENST00000507784 OR6B1O95007 311 aa16.04■□□□□ 0.16
RNF4-209ENST00000507784 EPPINO95925 133 aa16.04■□□□□ 0.16
RNF4-209ENST00000507784 LDLRP01130 860 aa16.04■□□□□ 0.16
RNF4-209ENST00000507784 FBXO45P0C2W1 286 aa16.04■□□□□ 0.16
RNF4-209ENST00000507784 ITGA2P17301 1181 aa16.04■□□□□ 0.16
RNF4-209ENST00000507784 RGS8P57771 180 aaPredicted RBP16.04■□□□□ 0.16
RNF4-209ENST00000507784 KCNC4Q03721 635 aa16.04■□□□□ 0.16
RNF4-209ENST00000507784 SLC34A1Q06495 639 aa16.04■□□□□ 0.16
RNF4-209ENST00000507784 FOXD4Q12950 439 aaPredicted RBP16.04■□□□□ 0.16
RNF4-209ENST00000507784 DEFB109BQ30KR1 87 aa16.04■□□□□ 0.16
RNF4-209ENST00000507784 KLHL26Q53HC5 615 aa16.04■□□□□ 0.16
RNF4-209ENST00000507784 ACER2Q5QJU3 275 aa16.04■□□□□ 0.16
RNF4-209ENST00000507784 AP1ARQ63HQ0 302 aa16.04■□□□□ 0.16
RNF4-209ENST00000507784 H3F3CQ6NXT2 135 aa16.04■□□□□ 0.16
RNF4-209ENST00000507784 LYPD8Q6UX82 237 aa16.04■□□□□ 0.16
RNF4-209ENST00000507784 ERMP1Q7Z2K6 904 aa16.04■□□□□ 0.16
RNF4-209ENST00000507784 MARCH3Q86UD3 253 aa16.04■□□□□ 0.16
RNF4-209ENST00000507784 COMTD1Q86VU5 262 aa16.04■□□□□ 0.16
RNF4-209ENST00000507784 RBM45Q8IUH3 476 aaKnown RBP16.04■□□□□ 0.16
RNF4-209ENST00000507784 LACC1Q8IV20 430 aa16.04■□□□□ 0.16
RNF4-209ENST00000507784 PQLC1Q8N2U9 271 aa16.04■□□□□ 0.16
RNF4-209ENST00000507784 OR4D11Q8NGI4 311 aa16.04■□□□□ 0.16
RNF4-209ENST00000507784 SNIP1Q8TAD8 396 aaKnown RBP16.04■□□□□ 0.16
RNF4-209ENST00000507784 PHOSPHO1Q8TCT1 267 aa16.04■□□□□ 0.16
RNF4-209ENST00000507784 HGDQ93099 445 aa16.04■□□□□ 0.16
RNF4-209ENST00000507784 SPACA9Q96E40 222 aaPredicted RBP16.04■□□□□ 0.16
RNF4-209ENST00000507784 C7orf34Q96L11 122 aa16.04■□□□□ 0.16
RNF4-209ENST00000507784 NODALQ96S42 347 aa16.04■□□□□ 0.16
RNF4-209ENST00000507784 TEKT2Q9UIF3 430 aa16.04■□□□□ 0.16
RNF4-209ENST00000507784 ABCG2Q9UNQ0 655 aa16.04■□□□□ 0.16
RNF4-209ENST00000507784 CHST2Q9Y4C5 530 aa16.04■□□□□ 0.16
RNF4-209ENST00000507784 PRAMEF25A6NGN4 478 aa16.03■□□□□ 0.16
RNF4-209ENST00000507784 TP53I11O14683 189 aa16.03■□□□□ 0.16
RNF4-209ENST00000507784 CLOCKO15516 846 aa16.03■□□□□ 0.16
RNF4-209ENST00000507784 EFSO43281 561 aa16.03■□□□□ 0.16
RNF4-209ENST00000507784 CSTAP01040 98 aa16.03■□□□□ 0.16
RNF4-209ENST00000507784 RAPSNQ13702 412 aa16.03■□□□□ 0.16
RNF4-209ENST00000507784 SNCBQ16143 134 aa16.03■□□□□ 0.16
RNF4-209ENST00000507784 NRF1Q16656 503 aa16.03■□□□□ 0.16
RNF4-209ENST00000507784 ABHD17BQ5VST6 288 aa16.03■□□□□ 0.16
RNF4-209ENST00000507784 RNF220Q5VTB9 566 aa16.03■□□□□ 0.16
RNF4-209ENST00000507784 HMBOX1Q6NT76 420 aa16.03■□□□□ 0.16
RNF4-209ENST00000507784 CYP4Z1Q86W10 505 aa16.03■□□□□ 0.16
RNF4-209ENST00000507784 LILRA2Q8N149 483 aa16.03■□□□□ 0.16
RNF4-209ENST00000507784 GALNT16Q8N428 558 aa16.03■□□□□ 0.16
RNF4-209ENST00000507784 CNOT9Q92600 299 aaKnown RBP16.03■□□□□ 0.16
RNF4-209ENST00000507784 DCBLD2Q96PD2 775 aa16.03■□□□□ 0.16
RNF4-209ENST00000507784 WFDC6Q9BQY6 131 aa16.03■□□□□ 0.16
RNF4-209ENST00000507784 HPF1Q9NWY4 346 aa16.03■□□□□ 0.16
RNF4-209ENST00000507784 STMN3Q9NZ72 180 aa16.03■□□□□ 0.16
RNF4-209ENST00000507784 C6orf203Q9P0P8 240 aaPredicted RBP16.03■□□□□ 0.16
RNF4-209ENST00000507784 ABI3Q9P2A4 366 aa16.03■□□□□ 0.16
RNF4-209ENST00000507784 ENPP4Q9Y6X5 453 aa16.03■□□□□ 0.16
RNF4-209ENST00000507784 DOCK10Q96BY6 2186 aa16.02■□□□□ 0.16
RNF4-209ENST00000507784 CDHR4A6H8M9 788 aa16.02■□□□□ 0.16
RNF4-209ENST00000507784 J3KTA2 159 aa16.02■□□□□ 0.16
RNF4-209ENST00000507784 AP3D1O14617 1153 aa16.02■□□□□ 0.16
RNF4-209ENST00000507784 NDUFB5O43674 189 aa16.02■□□□□ 0.16
RNF4-209ENST00000507784 FADS1O60427 444 aa16.02■□□□□ 0.16
RNF4-209ENST00000507784 DEAF1O75398 565 aaPredicted RBP16.02■□□□□ 0.16
RNF4-209ENST00000507784 UBTFL6P0CB48 400 aaPredicted RBP16.02■□□□□ 0.16
RNF4-209ENST00000507784 GKN3PP0CG01 181 aa16.02■□□□□ 0.16
RNF4-209ENST00000507784 EVI2BP34910 448 aa16.02■□□□□ 0.16
RNF4-209ENST00000507784 CCL11P51671 97 aa16.02■□□□□ 0.16
RNF4-209ENST00000507784 RPP38P78345 283 aaKnown RBP16.02■□□□□ 0.16
RNF4-209ENST00000507784 HOXC5Q00444 222 aa16.02■□□□□ 0.16
RNF4-209ENST00000507784 ATP6AP1Q15904 470 aa16.02■□□□□ 0.16
RNF4-209ENST00000507784 NTRK2Q16620 822 aa16.02■□□□□ 0.16
RNF4-209ENST00000507784 ZSWIM7Q19AV6 140 aa16.02■□□□□ 0.16
RNF4-209ENST00000507784 NDUFAF6Q330K2 333 aa16.02■□□□□ 0.16
RNF4-209ENST00000507784 ZNF791Q3KP31 576 aaPredicted RBP16.02■□□□□ 0.16
RNF4-209ENST00000507784 APOOLQ6UXV4 268 aa16.02■□□□□ 0.16
RNF4-209ENST00000507784 PIWIL3Q7Z3Z3 882 aaKnown RBP16.02■□□□□ 0.16
RNF4-209ENST00000507784 CMIPQ8IY22 773 aa16.02■□□□□ 0.16
RNF4-209ENST00000507784 BEST3Q8N1M1 668 aa16.02■□□□□ 0.16
RNF4-209ENST00000507784 TMCO5AQ8N6Q1 288 aa16.02■□□□□ 0.16
RNF4-209ENST00000507784 POGLUT1Q8NBL1 392 aa16.02■□□□□ 0.16
RNF4-209ENST00000507784 ICA1LQ8NDH6 482 aa16.02■□□□□ 0.16
RNF4-209ENST00000507784 OR10G3Q8NGC4 313 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms