RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 TRIM4Q9C037 500 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 SLC39A8Q9C0K1 460 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 SLC22A4Q9H015 551 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 NARFLQ9H6Q4 476 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 ATP13A3Q9H7F0 1226 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 VIPAS39Q9H9C1 493 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 Q9N2J8 555 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 MLXIPLQ9NP71 852 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 NOX4Q9NPH5 578 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 HINT3Q9NQE9 182 aaKnown RBP3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 OR2S2Q9NQN1 319 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 SMOXQ9NWM0 555 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 C1RLQ9NZP8 487 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 CCDC59Q9P031 241 aaKnown RBP3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 UVRAGQ9P2Y5 699 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 CLN8Q9UBY8 286 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 NDRG3Q9UGV2 375 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 CLEC2DQ9UHP7 191 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 C3orf18Q9UK00 162 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 MRTO4Q9UKD2 239 aaKnown RBP3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 SPATA2Q9UM82 520 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 STARD10Q9Y365 291 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 POLR3HQ9Y535 204 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 PCDHAC2Q9Y5I4 1007 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 HEMK1Q9Y5R4 338 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 KPTNQ9Y664 436 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 SIRT4Q9Y6E7 314 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 CDH10Q9Y6N8 788 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 URGCP-MRPS24S4R325 110 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 ARHGEF40Q8TER5 1519 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 CCDC88BA6NC98 1476 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 WRNQ14191 1432 aaPredicted RBP eCLIP3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 INSRP06213 1382 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 RAB3GAP2Q9H2M9 1393 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 PTPRCP08575 1304 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 MTMR11A4FU01 709 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 DPPA5A6NC42 116 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 SAGE2PA6NJ88 616 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 C15orf62A8K5M9 175 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 HSPB2A8KAH6 182 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 PRAMEF26H0Y7S4 382 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 CLIC1O00299 241 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 P2RY10O00398 339 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 SDHDO14521 159 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 GOSR2O14653 212 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 SLC16A4O15374 487 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 HUS1O60921 280 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 LDB3O75112 727 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 ZNF217O75362 1048 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 SH3BGRLO75368 114 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 PRKRAO75569 313 aaKnown RBP3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 OR2J3O76001 311 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 LRATO95237 230 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 GSRP00390 522 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 CST1P01037 141 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 NUDT17P0C025 328 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 OR4E1P0C645 316 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 CTRB1P17538 263 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 TNFRSF1BP20333 461 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 PRPS1L1P21108 318 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 BGNP21810 368 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 TUBG1P23258 451 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 CD82P27701 267 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 NDUFS1P28331 727 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 LAP3P28838 519 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 HSD11B1P28845 292 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 SFTPDP35247 375 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 UGT1A3P35503 534 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 STAT6P42226 847 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 SLCO1A2P46721 670 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 PPP3CCP48454 512 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 RGS6P49758 472 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 SERPINB8P50452 374 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 METAP2P50579 478 aaKnown RBP eCLIP3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 PLK1P53350 603 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 UCNP55089 124 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 PLP1P60201 277 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 WDR5P61964 334 aaKnown RBP3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 KCNJ2P63252 427 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 RAE1P78406 368 aaKnown RBP3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 ADARB1P78563 741 aaKnown RBP3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 GABPAQ06546 454 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 KLC1Q07866 573 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 TSPAN31Q12999 210 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 MSLNQ13421 630 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 SNTA1Q13424 505 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 VEZF1Q14119 521 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 HSPB2Q16082 182 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 POU2AF1Q16633 256 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 SNAI3Q3KNW1 292 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 CCDC58Q4VC31 144 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 ZNF585BQ52M93 769 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 YIF1BQ5BJH7 314 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 ARL13AQ5H913 290 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 OGFRL1Q5TC84 451 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 OR2G6Q5TZ20 316 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 FAM69BQ5VUD6 431 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 ALS2CLQ60I27 953 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms