RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 TMEM151AQ8N4L1 468 aa18.86■□□□□ 0.61
SQSTM1-210ENST00000506042 ZNF527Q8NB42 609 aa18.86■□□□□ 0.61
SQSTM1-210ENST00000506042 OR2V1Q8NHB1 315 aa18.86■□□□□ 0.61
SQSTM1-210ENST00000506042 C11orf24Q96F05 449 aaPredicted RBP18.86■□□□□ 0.61
SQSTM1-210ENST00000506042 PLPPR2Q96GM1 343 aa18.86■□□□□ 0.61
SQSTM1-210ENST00000506042 L2HGDHQ9H9P8 463 aa18.86■□□□□ 0.61
SQSTM1-210ENST00000506042 EQTNQ9NQ60 294 aa18.86■□□□□ 0.61
SQSTM1-210ENST00000506042 ZNF701Q9NV72 531 aaPredicted RBP18.86■□□□□ 0.61
SQSTM1-210ENST00000506042 ALG1L2C9J202 215 aa18.85■□□□□ 0.61
SQSTM1-210ENST00000506042 H0YC42 278 aa18.85■□□□□ 0.61
SQSTM1-210ENST00000506042 H3BNH8 94 aa18.85■□□□□ 0.61
SQSTM1-210ENST00000506042 RGS14O43566 566 aa18.85■□□□□ 0.61
SQSTM1-210ENST00000506042 GMFGO60234 142 aa18.85■□□□□ 0.61
SQSTM1-210ENST00000506042 SEC22BO75396 215 aa18.85■□□□□ 0.61
SQSTM1-210ENST00000506042 NME6O75414 186 aaPredicted RBP18.85■□□□□ 0.61
SQSTM1-210ENST00000506042 AQP8O94778 261 aa18.85■□□□□ 0.61
SQSTM1-210ENST00000506042 PSMG1O95456 288 aa18.85■□□□□ 0.61
SQSTM1-210ENST00000506042 IFNA2P01563 188 aa18.85■□□□□ 0.61
SQSTM1-210ENST00000506042 PYGBP11216 843 aa18.85■□□□□ 0.61
SQSTM1-210ENST00000506042 PSMB1P20618 241 aaKnown RBP18.85■□□□□ 0.61
SQSTM1-210ENST00000506042 IDUAP35475 653 aa18.85■□□□□ 0.61
SQSTM1-210ENST00000506042 HTR6P50406 440 aa18.85■□□□□ 0.61
SQSTM1-210ENST00000506042 TPD52P55327 224 aaPredicted RBP18.85■□□□□ 0.61
SQSTM1-210ENST00000506042 HSPB3Q12988 150 aa18.85■□□□□ 0.61
SQSTM1-210ENST00000506042 CPTPQ5TA50 214 aa18.85■□□□□ 0.61
SQSTM1-210ENST00000506042 NOXRED1Q6NXP6 359 aa18.85■□□□□ 0.61
SQSTM1-210ENST00000506042 ZCCHC12Q6PEW1 402 aa18.85■□□□□ 0.61
SQSTM1-210ENST00000506042 SPATA3Q8NHX4 192 aa18.85■□□□□ 0.61
SQSTM1-210ENST00000506042 SLC9A6Q92581 669 aa18.85■□□□□ 0.61
SQSTM1-210ENST00000506042 MARK4Q96L34 752 aa18.85■□□□□ 0.61
SQSTM1-210ENST00000506042 MS4A4EQ96PG1 132 aa18.85■□□□□ 0.61
SQSTM1-210ENST00000506042 HS3ST6Q96QI5 342 aa18.85■□□□□ 0.61
SQSTM1-210ENST00000506042 UBQLN4Q9NRR5 601 aa18.85■□□□□ 0.61
SQSTM1-210ENST00000506042 POLR3HQ9Y535 204 aaPredicted RBP18.85■□□□□ 0.61
SQSTM1-210ENST00000506042 ARID1AO14497 2285 aa18.85■□□□□ 0.61
SQSTM1-210ENST00000506042 INAFM1C9JVW0 142 aa18.84■□□□□ 0.61
SQSTM1-210ENST00000506042 SLC28A1O00337 649 aa18.84■□□□□ 0.61
SQSTM1-210ENST00000506042 GLRA3O75311 464 aa18.84■□□□□ 0.61
SQSTM1-210ENST00000506042 CTAGE8P0CG41 777 aa18.84■□□□□ 0.61
SQSTM1-210ENST00000506042 NEFHP12036 1026 aa18.84■□□□□ 0.61
SQSTM1-210ENST00000506042 IL32P24001 234 aa18.84■□□□□ 0.61
SQSTM1-210ENST00000506042 PRIM2P49643 509 aa18.84■□□□□ 0.61
SQSTM1-210ENST00000506042 MANFP55145 182 aaKnown RBP18.84■□□□□ 0.61
SQSTM1-210ENST00000506042 DMTNQ08495 405 aa18.84■□□□□ 0.61
SQSTM1-210ENST00000506042 VEZF1Q14119 521 aa18.84■□□□□ 0.61
SQSTM1-210ENST00000506042 GRAMD1BQ3KR37 738 aa18.84■□□□□ 0.61
SQSTM1-210ENST00000506042 STAC2Q6ZMT1 411 aa18.84■□□□□ 0.61
SQSTM1-210ENST00000506042 TRIM46Q7Z4K8 759 aa18.84■□□□□ 0.61
SQSTM1-210ENST00000506042 GGNQ86UU5 652 aa18.84■□□□□ 0.61
SQSTM1-210ENST00000506042 CTAGE4Q8IX94 777 aa18.84■□□□□ 0.61
SQSTM1-210ENST00000506042 PPP1R14CQ8TAE6 165 aa18.84■□□□□ 0.61
SQSTM1-210ENST00000506042 FBXW5Q969U6 566 aa18.84■□□□□ 0.61
SQSTM1-210ENST00000506042 CPNE4Q96A23 557 aaPredicted RBP18.84■□□□□ 0.61
SQSTM1-210ENST00000506042 PPCDCQ96CD2 204 aa18.84■□□□□ 0.61
SQSTM1-210ENST00000506042 ZNF764Q96H86 408 aaPredicted RBP18.84■□□□□ 0.61
SQSTM1-210ENST00000506042 GP6Q9HCN6 339 aa18.84■□□□□ 0.61
SQSTM1-210ENST00000506042 FAIMQ9NVQ4 179 aa18.84■□□□□ 0.61
SQSTM1-210ENST00000506042 PSMC3IPQ9P2W1 217 aaPredicted RBP18.84■□□□□ 0.61
SQSTM1-210ENST00000506042 MID2Q9UJV3 735 aa18.84■□□□□ 0.61
SQSTM1-210ENST00000506042 RNF115Q9Y4L5 304 aa18.84■□□□□ 0.61
SQSTM1-210ENST00000506042 ADAMDEC1O15204 470 aa18.83■□□□□ 0.6
SQSTM1-210ENST00000506042 CD3EP07766 207 aa18.83■□□□□ 0.6
SQSTM1-210ENST00000506042 ALOX5P09917 674 aa18.83■□□□□ 0.6
SQSTM1-210ENST00000506042 UROSP10746 265 aa18.83■□□□□ 0.6
SQSTM1-210ENST00000506042 ATP6V1C1P21283 382 aa18.83■□□□□ 0.6
SQSTM1-210ENST00000506042 ELK4P28324 431 aa18.83■□□□□ 0.6
SQSTM1-210ENST00000506042 PRKAG1P54619 331 aa18.83■□□□□ 0.6
SQSTM1-210ENST00000506042 CARD18P57730 90 aa18.83■□□□□ 0.6
SQSTM1-210ENST00000506042 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.83■□□□□ 0.6
SQSTM1-210ENST00000506042 TMEM44Q2T9K0 475 aa18.83■□□□□ 0.6
SQSTM1-210ENST00000506042 CCDC153Q494R4 210 aa18.83■□□□□ 0.6
SQSTM1-210ENST00000506042 R3HCC1LQ7Z5L2 792 aaKnown RBP18.83■□□□□ 0.6
SQSTM1-210ENST00000506042 TRABD2AQ86V40 505 aa18.83■□□□□ 0.6
SQSTM1-210ENST00000506042 COX18Q8N8Q8 333 aa18.83■□□□□ 0.6
SQSTM1-210ENST00000506042 CHMP6Q96FZ7 201 aa18.83■□□□□ 0.6
SQSTM1-210ENST00000506042 ALG2Q9H553 416 aa18.83■□□□□ 0.6
SQSTM1-210ENST00000506042 NSD1Q96L73 2696 aaPredicted RBP18.83■□□□□ 0.6
SQSTM1-210ENST00000506042 ZNF469Q96JG9 3925 aaPredicted RBP18.82■□□□□ 0.6
SQSTM1-210ENST00000506042 CXCL13O43927 109 aa18.82■□□□□ 0.6
SQSTM1-210ENST00000506042 NKX2-2O95096 273 aa18.82■□□□□ 0.6
SQSTM1-210ENST00000506042 OXSR1O95747 527 aaPredicted RBP18.82■□□□□ 0.6
SQSTM1-210ENST00000506042 NUDT14O95848 222 aa18.82■□□□□ 0.6
SQSTM1-210ENST00000506042 RPL3P39023 403 aaKnown RBP18.82■□□□□ 0.6
SQSTM1-210ENST00000506042 ASMTP46597 345 aa18.82■□□□□ 0.6
SQSTM1-210ENST00000506042 CCT5P48643 541 aa18.82■□□□□ 0.6
SQSTM1-210ENST00000506042 SLC18A2Q05940 514 aa18.82■□□□□ 0.6
SQSTM1-210ENST00000506042 MTERF4Q7Z6M4 381 aaKnown RBP18.82■□□□□ 0.6
SQSTM1-210ENST00000506042 CCDC63Q8NA47 563 aa18.82■□□□□ 0.6
SQSTM1-210ENST00000506042 NUP43Q8NFH3 380 aa18.82■□□□□ 0.6
SQSTM1-210ENST00000506042 HSD17B8Q92506 261 aa18.82■□□□□ 0.6
SQSTM1-210ENST00000506042 AKAP1Q92667 903 aaKnown RBP eCLIP18.82■□□□□ 0.6
SQSTM1-210ENST00000506042 KLHL15Q96M94 604 aa18.82■□□□□ 0.6
SQSTM1-210ENST00000506042 KCNA7Q96RP8 456 aa18.82■□□□□ 0.6
SQSTM1-210ENST00000506042 CCT7Q99832 543 aa18.82■□□□□ 0.6
SQSTM1-210ENST00000506042 HOXD1Q9GZZ0 328 aa18.82■□□□□ 0.6
SQSTM1-210ENST00000506042 LRTM1Q9HBL6 345 aa18.82■□□□□ 0.6
SQSTM1-210ENST00000506042 BARX1Q9HBU1 254 aaPredicted RBP18.82■□□□□ 0.6
SQSTM1-210ENST00000506042 C1orf109Q9NX04 203 aa18.82■□□□□ 0.6
SQSTM1-210ENST00000506042 CLEC4AQ9UMR7 237 aa18.82■□□□□ 0.6
SQSTM1-210ENST00000506042 LAMP3Q9UQV4 416 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms