RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 FIGNL1Q6PIW4 674 aa7.46□□□□□ -1.22
COL4A5-208ENST00000505728 KLHL17Q6TDP4 642 aa7.46□□□□□ -1.22
COL4A5-208ENST00000505728 PLEKHM3Q6ZWE6 761 aa7.46□□□□□ -1.22
COL4A5-208ENST00000505728 RRM2BQ7LG56 351 aa7.46□□□□□ -1.22
COL4A5-208ENST00000505728 HMGN2P46Q86SG4 172 aa7.46□□□□□ -1.22
COL4A5-208ENST00000505728 RANBP3LQ86VV4 465 aaPredicted RBP7.46□□□□□ -1.22
COL4A5-208ENST00000505728 GRAMD2AQ8IUY3 354 aa7.46□□□□□ -1.22
COL4A5-208ENST00000505728 CMIPQ8IY22 773 aa7.46□□□□□ -1.22
COL4A5-208ENST00000505728 MORN4Q8NDC4 146 aa7.46□□□□□ -1.22
COL4A5-208ENST00000505728 RCBTB1Q8NDN9 531 aa7.46□□□□□ -1.22
COL4A5-208ENST00000505728 OR14A16Q8NHC5 309 aa7.46□□□□□ -1.22
COL4A5-208ENST00000505728 C16orf52Q8NHV5 167 aa7.46□□□□□ -1.22
COL4A5-208ENST00000505728 RHOXF1Q8NHV9 184 aa7.46□□□□□ -1.22
COL4A5-208ENST00000505728 SLC7A13Q8TCU3 470 aa7.46□□□□□ -1.22
COL4A5-208ENST00000505728 GNPDA2Q8TDQ7 276 aa7.46□□□□□ -1.22
COL4A5-208ENST00000505728 PTPMT1Q8WUK0 201 aaPredicted RBP7.46□□□□□ -1.22
COL4A5-208ENST00000505728 DIO2Q92813 273 aa7.46□□□□□ -1.22
COL4A5-208ENST00000505728 DAZLQ92904 295 aaKnown RBP7.46□□□□□ -1.22
COL4A5-208ENST00000505728 CCDC74BQ96LY2 380 aa7.46□□□□□ -1.22
COL4A5-208ENST00000505728 GFM1Q96RP9 751 aaKnown RBP7.46□□□□□ -1.22
COL4A5-208ENST00000505728 GTPBP2Q9BX10 602 aaKnown RBP7.46□□□□□ -1.22
COL4A5-208ENST00000505728 HOXD1Q9GZZ0 328 aa7.46□□□□□ -1.22
COL4A5-208ENST00000505728 ADNPQ9H2P0 1102 aa7.46□□□□□ -1.22
COL4A5-208ENST00000505728 VCX3AQ9NNX9 186 aa7.46□□□□□ -1.22
COL4A5-208ENST00000505728 MAN2C1Q9NTJ4 1040 aa7.46□□□□□ -1.22
COL4A5-208ENST00000505728 PLCXD1Q9NUJ7 323 aa7.46□□□□□ -1.22
COL4A5-208ENST00000505728 C14orf105Q9NVL8 296 aa7.46□□□□□ -1.22
COL4A5-208ENST00000505728 FBXO34Q9NWN3 711 aa7.46□□□□□ -1.22
COL4A5-208ENST00000505728 SIDT1Q9NXL6 827 aaKnown RBP7.46□□□□□ -1.22
COL4A5-208ENST00000505728 REV1Q9UBZ9 1251 aa7.46□□□□□ -1.22
COL4A5-208ENST00000505728 MRTO4Q9UKD2 239 aaKnown RBP7.46□□□□□ -1.22
COL4A5-208ENST00000505728 CBLCQ9ULV8 474 aa7.46□□□□□ -1.22
COL4A5-208ENST00000505728 WASF3Q9UPY6 502 aa7.46□□□□□ -1.22
COL4A5-208ENST00000505728 GPR55Q9Y2T6 319 aaPredicted RBP7.46□□□□□ -1.22
COL4A5-208ENST00000505728 PCDHGA6Q9Y5G7 932 aa7.46□□□□□ -1.22
COL4A5-208ENST00000505728 CELSR3Q9NYQ7 3312 aa7.46□□□□□ -1.22
COL4A5-208ENST00000505728 ADAMTS20P59510 1910 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 TRAPPC13A5PLN9 417 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 OR2W5A6NFC9 320 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 CPSF4LA6NMK7 179 aaKnown RBP7.45□□□□□ -1.22
COL4A5-208ENST00000505728 ZAR1LA6NP61 321 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 C1QTNF9BB2RNN3 333 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 NPIPB9F8W1W9 429 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 HRKO00198 91 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 SLC1A7O00341 560 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 LDOC1O95751 146 aaPredicted RBP7.45□□□□□ -1.22
COL4A5-208ENST00000505728 CLPSP04118 112 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 GP1BAP07359 652 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 CYC1P08574 325 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 C1QTNF9P0C862 333 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 CT45A8P0DMV1 189 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 CT45A9P0DMV2 189 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 FGF5P12034 268 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 POU2F1P14859 743 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 AGXTP21549 392 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 FUT4P22083 530 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 CHMP24386 653 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 EEF1B2P24534 225 aaKnown RBP7.45□□□□□ -1.22
COL4A5-208ENST00000505728 EPHA2P29317 976 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 CSTF2P33240 577 aaKnown RBP eCLIP7.45□□□□□ -1.22
COL4A5-208ENST00000505728 GRK6P43250 576 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 NOVA1P51513 510 aaKnown RBP7.45□□□□□ -1.22
COL4A5-208ENST00000505728 ZNF136P52737 540 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 SLC37A1P57057 533 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 CDC42P60953 191 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 PSPHP78330 225 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 DCDP81605 110 aaKnown RBP7.45□□□□□ -1.22
COL4A5-208ENST00000505728 OCA2Q04671 838 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 ZFP36L1Q07352 338 aaKnown RBP7.45□□□□□ -1.22
COL4A5-208ENST00000505728 TARDBPQ13148 414 aaKnown RBP eCLIP7.45□□□□□ -1.22
COL4A5-208ENST00000505728 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.45□□□□□ -1.22
COL4A5-208ENST00000505728 ZBED5Q49AG3 693 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 MINDY4Q4G0A6 757 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 NADK2Q4G0N4 442 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 FLYWCH1Q4VC44 716 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 CT45A2Q5DJT8 189 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 VWA2Q5GFL6 755 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 MRPL2Q5T653 305 aaKnown RBP7.45□□□□□ -1.22
COL4A5-208ENST00000505728 MFSD4BQ5TF39 518 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 C1orf189Q5VU69 101 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 NPSR1Q6W5P4 371 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 SATL1Q86VE3 508 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 PPP1R3BQ86XI6 285 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 P3H2Q8IVL5 708 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 SLITRK4Q8IW52 837 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 RNF113BQ8IZP6 322 aaKnown RBP7.45□□□□□ -1.22
COL4A5-208ENST00000505728 OR4K5Q8NGD3 323 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 OR2I1PQ8NGU4 316 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 CNIH3Q8TBE1 160 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 ZNF721Q8TF20 911 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 IPCEF1Q8WWN9 437 aaPredicted RBP7.45□□□□□ -1.22
COL4A5-208ENST00000505728 ACOT11Q8WXI4 607 aaPredicted RBP7.45□□□□□ -1.22
COL4A5-208ENST00000505728 TSLPQ969D9 159 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 GTPBP3Q969Y2 492 aaKnown RBP7.45□□□□□ -1.22
COL4A5-208ENST00000505728 SLC41A3Q96GZ6 507 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 OR6C1Q96RD1 312 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 TUBA1CQ9BQE3 449 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 ZNF559Q9BR84 538 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 DUSP21Q9H596 190 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 SYNDIG1Q9H7V2 258 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms