RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 CBX3Q13185 183 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 NHSL2Q5HYW2 709 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 C22orf42Q6IC83 251 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 ACOT11Q8WXI4 607 aaPredicted RBP13.17□□□□□ -0.3
TCOF1-207ENST00000504761 SLCO4A1Q96BD0 722 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 BPIFA2Q96DR5 249 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 BTBD2Q9BX70 525 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 EGLN3Q9H6Z9 239 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 SLC6A20Q9NP91 592 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 TMEM9Q9P0T7 183 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 MTCH2Q9Y6C9 303 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 FGF17O60258 216 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 ITGA3P26006 1051 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 MAP3K8P41279 467 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 PPP3R1P63098 170 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 APOFQ13790 326 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 ZNF595Q8IYB9 648 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 EFCAB7A8K855 629 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 TNFRSF21O75509 655 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 IGHA2P01877 340 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 TRIM23P36406 574 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 PIGAP37287 484 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 CCR5P51681 352 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 SLC14A1Q13336 389 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 TOR1AIP2Q8NFQ8 470 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 NLGN4YQ8NFZ3 816 aaPredicted RBP13.17□□□□□ -0.3
TCOF1-207ENST00000504761 SAP130Q9H0E3 1048 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 LDAHQ9H6V9 325 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 ZNF749O43361 778 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 PAPLNO95428 1278 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 RLN1P04808 185 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 CELA2BP08218 269 aaPredicted RBP13.17□□□□□ -0.3
TCOF1-207ENST00000504761 PRKCAP17252 672 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 GGT2P36268 569 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 OR2B6P58173 313 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 EEF1A2Q05639 463 aaKnown RBP13.17□□□□□ -0.3
TCOF1-207ENST00000504761 GAS6Q14393 721 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 OR1Q1Q15612 314 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 ASB18Q6ZVZ8 466 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 GID4Q8IVV7 300 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 AMER3Q8N944 861 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 NAXEQ8NCW5 288 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 SLC22A8Q8TCC7 542 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 NEK7Q8TDX7 302 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 ZMYND19Q96E35 227 aaPredicted RBP13.17□□□□□ -0.3
TCOF1-207ENST00000504761 NIPSNAP1Q9BPW8 284 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 DDX31Q9H8H2 851 aaKnown RBP13.17□□□□□ -0.3
TCOF1-207ENST00000504761 PALMDQ9NP74 551 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 IER3IP1Q9Y5U9 82 aa13.17□□□□□ -0.3
TCOF1-207ENST00000504761 GPC6Q9Y625 555 aaPredicted RBP13.17□□□□□ -0.3
TCOF1-207ENST00000504761 FMO6PO60774 539 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 GLULP15104 373 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 CHMP24386 653 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 KIR2DL1P43626 348 aaPredicted RBP13.16□□□□□ -0.3
TCOF1-207ENST00000504761 MFSD12Q6NUT3 480 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 SPARTQ8N0X7 666 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 B3GNT7Q8NFL0 401 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 HMGCLL1Q8TB92 370 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 FAM174AQ8TBP5 190 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 SENP5Q96HI0 755 aaPredicted RBP13.16□□□□□ -0.3
TCOF1-207ENST00000504761 AMBRA1Q9C0C7 1298 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 PAK1IP1Q9NWT1 392 aaPredicted RBP13.16□□□□□ -0.3
TCOF1-207ENST00000504761 EXOSC1Q9Y3B2 195 aaKnown RBP13.16□□□□□ -0.3
TCOF1-207ENST00000504761 PCDHGB5Q9Y5G0 923 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 ASPDHA6ND91 283 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 METTL12A8MUP2 240 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 SSNA1O43805 119 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 FCMRO60667 390 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 GIPRP48546 466 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 RAB25P57735 213 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 SCN1BQ07699 218 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 HNRNPA0Q13151 305 aaKnown RBP13.16□□□□□ -0.3
TCOF1-207ENST00000504761 FGL2Q14314 439 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 DUSP5Q16690 384 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 VWA2Q5GFL6 755 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 LEG1Q6P5S2 330 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 DNM1P34Q6PK57 102 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 MAFAQ8NHW3 353 aaPredicted RBP13.16□□□□□ -0.3
TCOF1-207ENST00000504761 OR10A5Q9H207 317 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 SLC39A1Q9NY26 324 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 CD8B2A6NJW9 211 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 VSTM2BA6NLU5 285 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 ADAM23O75077 832 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 CER1O95813 267 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 CD8BP10966 210 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 UBL4AP11441 157 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 CD1CP29017 333 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 KIAA0040Q15053 153 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 COL13A1Q5TAT6 717 aaPredicted RBP13.16□□□□□ -0.3
TCOF1-207ENST00000504761 SPRED1Q7Z699 444 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 SMRP1Q8NCR6 262 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 AGBL5Q8NDL9 886 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 SDR9C7Q8NEX9 313 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 BAHD1Q8TBE0 780 aaPredicted RBP13.16□□□□□ -0.3
TCOF1-207ENST00000504761 WASH6PQ9NQA3 447 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 MUTYHQ9UIF7 546 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 PADI2Q9Y2J8 665 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 RNF215Q9Y6U7 377 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 HSPE1-MOB4S4R3N1 261 aa13.16□□□□□ -0.3
TCOF1-207ENST00000504761 A0A1W2PPL8 197 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms