RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 NPIPA8P0DM63 369 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 ARAFP10398 606 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 HPGDP15428 266 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 SLC6A2P23975 617 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 LCN1P31025 176 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 CRISP3P54108 245 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 GPR85P60893 370 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 KCNJ2P63252 427 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 GNA13Q14344 377 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 GPR68Q15743 365 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 SYPL1Q16563 259 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 GRAMD1BQ3KR37 738 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 PLEKHN1Q494U1 663 aaPredicted RBP9.18□□□□□ -0.94
NUP54-203ENST00000504173 FLYWCH1Q4VC44 716 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 TBCELQ5QJ74 424 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 BICRALQ6AI39 1079 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 LRRC74BQ6ZQY2 392 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 OLIG3Q7RTU3 272 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 SULF2Q8IWU5 870 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 C10orf111Q8N326 155 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 FAM98AQ8NCA5 519 aaKnown RBP9.18□□□□□ -0.94
NUP54-203ENST00000504173 OR10A6Q8NH74 314 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 GRHL3Q8TE85 626 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 MAL2Q969L2 176 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 TMEM19Q96HH6 336 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 TRNT1Q96Q11 434 aaKnown RBP9.18□□□□□ -0.94
NUP54-203ENST00000504173 ECSITQ9BQ95 431 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 GPATCH1Q9BRR8 931 aaKnown RBP9.18□□□□□ -0.94
NUP54-203ENST00000504173 DOHHQ9BU89 302 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 REPIN1Q9BWE0 567 aaKnown RBP9.18□□□□□ -0.94
NUP54-203ENST00000504173 TBL1XR1Q9BZK7 514 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 ZNF350Q9GZX5 532 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 HOXD1Q9GZZ0 328 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 KAT8Q9H7Z6 458 aaKnown RBP9.18□□□□□ -0.94
NUP54-203ENST00000504173 A4GALTQ9NPC4 353 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 POLE3Q9NRF9 147 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 UBQLN4Q9NRR5 601 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 NDE1Q9NXR1 346 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 CALML5Q9NZT1 146 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 FLRT3Q9NZU0 649 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 ITGB1BP2Q9UKP3 347 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 ABCG2Q9UNQ0 655 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 AP3M1Q9Y2T2 418 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 WDR45Q9Y484 360 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 PCDHGB6Q9Y5F9 930 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 A0A0G2JMM0 328 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 A0A1W2PPB8 328 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 A0A1W2PRS3 328 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 KIR3DP1A8MWS1 328 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 KLRC4-KLRK1H3BQV0 150 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 SCDO00767 359 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 PEX1O43933 1283 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 FCMRO60667 390 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 OXSR1O95747 527 aaPredicted RBP9.17□□□□□ -0.94
NUP54-203ENST00000504173 TFPTP0C1Z6 253 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 CNR1P21554 472 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 TBXA2RP21731 343 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 CASP3P42574 277 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 MASP1P48740 699 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 DNASE1L1P49184 302 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 CLK3P49761 638 aaKnown RBP9.17□□□□□ -0.94
NUP54-203ENST00000504173 MEOX1P50221 254 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 SLC7A2P52569 658 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 ATP12AP54707 1039 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 PSME3P61289 254 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 CDK6Q00534 326 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 CHRNEQ04844 493 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 SCARB2Q14108 478 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 ZNF630Q2M218 657 aaPredicted RBP9.17□□□□□ -0.94
NUP54-203ENST00000504173 RPS26P11Q5JNZ5 115 aaPredicted RBP9.17□□□□□ -0.94
NUP54-203ENST00000504173 SP5Q6BEB4 398 aaPredicted RBP9.17□□□□□ -0.94
NUP54-203ENST00000504173 TYW3Q6IPR3 259 aaKnown RBP9.17□□□□□ -0.94
NUP54-203ENST00000504173 SLC30A6Q6NXT4 461 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 C8orf82Q6P1X6 216 aaPredicted RBP9.17□□□□□ -0.94
NUP54-203ENST00000504173 TMEM81Q6P7N7 255 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 C16orf89Q6UX73 402 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 FRRS1Q6ZNA5 592 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 GDF7Q7Z4P5 450 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.17□□□□□ -0.94
NUP54-203ENST00000504173 SERPINA11Q86U17 422 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 SLC15A3Q8IY34 581 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 PGAM4Q8N0Y7 254 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 ZNF619Q8N2I2 560 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 ZNF614Q8N883 585 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 ZNF527Q8NB42 609 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 POGLUT1Q8NBL1 392 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 C11orf65Q8NCR3 313 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 OR2M7Q8NG81 312 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 NFKBIDQ8NI38 313 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 SLC38A5Q8WUX1 472 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 JSRP1Q96MG2 331 aaPredicted RBP9.17□□□□□ -0.94
NUP54-203ENST00000504173 FAM173AQ9BQD7 235 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 SPATA9Q9BWV2 254 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 ANGPTL4Q9BY76 406 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 SLC38A1Q9H2H9 487 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 PIF1Q9H611 641 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 TMEM38AQ9H6F2 299 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 CACYBPQ9HB71 228 aaKnown RBP9.17□□□□□ -0.94
NUP54-203ENST00000504173 GALNT9Q9HCQ5 603 aa9.17□□□□□ -0.94
NUP54-203ENST00000504173 SPAG4Q9NPE6 437 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms