RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 UGT1A4P22310 534 aa4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 SPRP35270 261 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 BRCC3P46736 316 aa4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 PDK3Q15120 406 aa4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 SIX1Q15475 284 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 CHI3L2Q15782 390 aa4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 FAM74A3Q4VXF1 159 aa4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 ACER2Q5QJU3 275 aa4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 CELF3Q5SZQ8 465 aaKnown RBP4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 ATF7IP2Q5U623 682 aa4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 LANCL3Q6ZV70 420 aa4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 RNF130Q86XS8 419 aa4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 ZNF683Q8IZ20 524 aa4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 ZNF491Q8N8L2 437 aa4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 ANKFN1Q8N957 763 aa4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 BEST4Q8NFU0 473 aa4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 LRRC15Q8TF66 581 aa4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 DNASE2BQ8WZ79 361 aa4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 TAF15Q92804 592 aaKnown RBP eCLIP4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 C18orf25Q96B23 403 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 DNAJA3Q96EY1 480 aa4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 WBP1Q96G27 269 aa4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 SECISBP2Q96T21 854 aaKnown RBP4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 ZBTB18Q99592 522 aa4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 TTYH2Q9BSA4 534 aa4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 EDEM2Q9BV94 578 aa4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 OCR1Q9BZK8 76 aa4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 UTP6Q9NYH9 597 aaKnown RBP4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 WDR45Q9Y484 360 aa4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 CPQQ9Y646 472 aa4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 SPACA6W5XKT8 324 aa4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 ROCK1Q13464 1354 aa4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 PLEKHG1Q9ULL1 1385 aa4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 FAM135BQ49AJ0 1406 aa4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 RIMS2Q9UQ26 1411 aa4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 NKTRP30414 1462 aaKnown RBP4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 COL16A1Q07092 1604 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P3-201ENST00000502802 ADAMTS13Q76LX8 1427 aa4.33□□□□□ -1.72
HMGB1P3-201ENST00000502802 TRBV7-9A0A0J9YWB2 115 aa4.33□□□□□ -1.72
HMGB1P3-201ENST00000502802 PPIHO43447 177 aaKnown RBP4.33□□□□□ -1.72
HMGB1P3-201ENST00000502802 SURF6O75683 361 aaKnown RBP4.33□□□□□ -1.72
HMGB1P3-201ENST00000502802 MAGEA5P43359 124 aa4.33□□□□□ -1.72
HMGB1P3-201ENST00000502802 POU3F4P49335 361 aa4.33□□□□□ -1.72
HMGB1P3-201ENST00000502802 SULT1E1P49888 294 aa4.33□□□□□ -1.72
HMGB1P3-201ENST00000502802 ATP4BP51164 291 aa4.33□□□□□ -1.72
HMGB1P3-201ENST00000502802 PLA2G16P53816 162 aa4.33□□□□□ -1.72
HMGB1P3-201ENST00000502802 MFAP2P55001 183 aa4.33□□□□□ -1.72
HMGB1P3-201ENST00000502802 AIF1P55008 147 aa4.33□□□□□ -1.72
HMGB1P3-201ENST00000502802 NTHL1P78549 312 aa4.33□□□□□ -1.72
HMGB1P3-201ENST00000502802 LY6DQ14210 128 aa4.33□□□□□ -1.72
HMGB1P3-201ENST00000502802 ZMYND11Q15326 602 aa4.33□□□□□ -1.72
HMGB1P3-201ENST00000502802 SYPL1Q16563 259 aa4.33□□□□□ -1.72
HMGB1P3-201ENST00000502802 CCL14Q16627 93 aa4.33□□□□□ -1.72
HMGB1P3-201ENST00000502802 SEL1L2Q5TEA6 688 aa4.33□□□□□ -1.72
HMGB1P3-201ENST00000502802 FAM219BQ5XKK7 198 aa4.33□□□□□ -1.72
HMGB1P3-201ENST00000502802 SCYL2Q6P3W7 929 aa4.33□□□□□ -1.72
HMGB1P3-201ENST00000502802 CATSPER3Q86XQ3 398 aa4.33□□□□□ -1.72
HMGB1P3-201ENST00000502802 PRSS33Q8NF86 280 aa4.33□□□□□ -1.72
HMGB1P3-201ENST00000502802 OR13C2Q8NGS9 318 aa4.33□□□□□ -1.72
HMGB1P3-201ENST00000502802 RPL3LQ92901 407 aaKnown RBP4.33□□□□□ -1.72
HMGB1P3-201ENST00000502802 EMG1Q92979 244 aaKnown RBP4.33□□□□□ -1.72
HMGB1P3-201ENST00000502802 NTNG2Q96CW9 530 aa4.33□□□□□ -1.72
HMGB1P3-201ENST00000502802 MOCOSQ96EN8 888 aa4.33□□□□□ -1.72
HMGB1P3-201ENST00000502802 TRIM9Q9C026 710 aa4.33□□□□□ -1.72
HMGB1P3-201ENST00000502802 APMAPQ9HDC9 416 aa4.33□□□□□ -1.72
HMGB1P3-201ENST00000502802 SCRT2Q9NQ03 307 aa4.33□□□□□ -1.72
HMGB1P3-201ENST00000502802 ZDHHC18Q9NUE0 388 aa4.33□□□□□ -1.72
HMGB1P3-201ENST00000502802 ZNF446Q9NWS9 450 aa4.33□□□□□ -1.72
HMGB1P3-201ENST00000502802 GALPQ9UBC7 116 aa4.33□□□□□ -1.72
HMGB1P3-201ENST00000502802 ASIC3Q9UHC3 531 aa4.33□□□□□ -1.72
HMGB1P3-201ENST00000502802 CLEC4AQ9UMR7 237 aa4.33□□□□□ -1.72
HMGB1P3-201ENST00000502802 SETD1AO15047 1707 aaKnown RBP4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 XRN1Q8IZH2 1706 aaKnown RBP4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 CLTCL1P53675 1640 aa4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 DIP2AQ14689 1571 aa4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 NUP155O75694 1391 aa4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 EP400Q96L91 3159 aa4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 SOCS3O14543 225 aa4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 STX7O15400 261 aaKnown RBP4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 ARHGEF9O43307 516 aa4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 RAMP1O60894 148 aa4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 B3GAT3O94766 335 aa4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 POP4O95707 220 aaKnown RBP4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 IL1BP01584 269 aa4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 IGF1P05019 195 aa4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 IGFBP1P08833 259 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 SNRPCP09234 159 aaKnown RBP4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 TRIM49P0CI25 452 aa4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 TRIM49CP0CI26 452 aa4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 ZNF44P15621 663 aa4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 XRCC1P18887 633 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 CAPGP40121 348 aa4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 KRTAP10-11P60412 298 aa4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 RPS6P62753 249 aaKnown RBP4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 CSTF1Q05048 431 aaKnown RBP4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 ZNF33BQ06732 778 aa4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 ATXN7L3Q14CW9 347 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 BOLA3Q53S33 107 aa4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 CCDC183Q5T5S1 534 aa4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 REP15Q6BDI9 236 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms