RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 TBXA2RP21731 343 aa10.58□□□□□ -0.72
NUDCD3-211ENST00000497978 MAPK1P28482 360 aa10.58□□□□□ -0.72
NUDCD3-211ENST00000497978 LCN1P31025 176 aa10.58□□□□□ -0.72
NUDCD3-211ENST00000497978 UGT2B10P36537 528 aa10.58□□□□□ -0.72
NUDCD3-211ENST00000497978 SERPINB4P48594 390 aa10.58□□□□□ -0.72
NUDCD3-211ENST00000497978 CLDN20P56880 219 aa10.58□□□□□ -0.72
NUDCD3-211ENST00000497978 SLC18A2Q05940 514 aa10.58□□□□□ -0.72
NUDCD3-211ENST00000497978 PCLAFQ15004 111 aa10.58□□□□□ -0.72
NUDCD3-211ENST00000497978 KRTAP21-3Q3LHN1 58 aa10.58□□□□□ -0.72
NUDCD3-211ENST00000497978 GALNTL6Q49A17 601 aa10.58□□□□□ -0.72
NUDCD3-211ENST00000497978 RFTN2Q52LD8 501 aaPredicted RBP10.58□□□□□ -0.72
NUDCD3-211ENST00000497978 KANK2Q63ZY3 851 aa10.58□□□□□ -0.72
NUDCD3-211ENST00000497978 PPP4R4Q6NUP7 873 aa10.58□□□□□ -0.72
NUDCD3-211ENST00000497978 ZCCHC12Q6PEW1 402 aa10.58□□□□□ -0.72
NUDCD3-211ENST00000497978 ZNF474Q6S9Z5 364 aaPredicted RBP10.58□□□□□ -0.72
NUDCD3-211ENST00000497978 LRIG3Q6UXM1 1119 aa10.58□□□□□ -0.72
NUDCD3-211ENST00000497978 Q6ZSR9 355 aa10.58□□□□□ -0.72
NUDCD3-211ENST00000497978 EXOC3L1Q86VI1 746 aa10.58□□□□□ -0.72
NUDCD3-211ENST00000497978 WDR75Q8IWA0 830 aaKnown RBP10.58□□□□□ -0.72
NUDCD3-211ENST00000497978 OR2T11Q8NH01 316 aa10.58□□□□□ -0.72
NUDCD3-211ENST00000497978 CLHC1Q8NHS4 586 aa10.58□□□□□ -0.72
NUDCD3-211ENST00000497978 HOXB13Q92826 284 aaPredicted RBP10.58□□□□□ -0.72
NUDCD3-211ENST00000497978 MTERF3Q96E29 417 aa10.58□□□□□ -0.72
NUDCD3-211ENST00000497978 FCRL1Q96LA6 429 aa10.58□□□□□ -0.72
NUDCD3-211ENST00000497978 WFIKKN1Q96NZ8 548 aa10.58□□□□□ -0.72
NUDCD3-211ENST00000497978 GATA5Q9BWX5 397 aaPredicted RBP10.58□□□□□ -0.72
NUDCD3-211ENST00000497978 PAQR5Q9NXK6 330 aaPredicted RBP10.58□□□□□ -0.72
NUDCD3-211ENST00000497978 KLHL28Q9NXS3 571 aa10.58□□□□□ -0.72
NUDCD3-211ENST00000497978 NTMQ9P121 344 aa10.58□□□□□ -0.72
NUDCD3-211ENST00000497978 BAIAP2L1Q9UHR4 511 aa10.58□□□□□ -0.72
NUDCD3-211ENST00000497978 VDAC3Q9Y277 283 aa10.58□□□□□ -0.72
NUDCD3-211ENST00000497978 EMC9Q9Y3B6 208 aa10.58□□□□□ -0.72
NUDCD3-211ENST00000497978 DNAJC15Q9Y5T4 150 aa10.58□□□□□ -0.72
NUDCD3-211ENST00000497978 PCNX3Q9H6A9 2034 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 SETD2Q9BYW2 2564 aaPredicted RBP10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 TLDC2A0PJX2 215 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 TMEM114B3SHH9 223 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 SCDO00767 359 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 EIF1AYO14602 144 aaKnown RBP10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 LSM1O15116 133 aaKnown RBP10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 ARHGEF9O43307 516 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 NPHS1O60500 1241 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 KCNK2O95069 426 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 OXSR1O95747 527 aaPredicted RBP10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 HSPA4LO95757 839 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 CRYGSP22914 178 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 ME2P23368 584 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 HPCAL1P37235 193 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 RPL3P39023 403 aaKnown RBP10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 MAP3K8P41279 467 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 FRKP42685 505 aaPredicted RBP10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 EIF1AXP47813 144 aaKnown RBP10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 PRIM2P49643 509 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 ZNF41P51814 821 aaPredicted RBP10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 CTBP2P56545 445 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 PDE7AQ13946 482 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 TMEM44Q2T9K0 475 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 ZNF385BQ569K4 471 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 PDSS1Q5T2R2 415 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 SHEQ5VZ18 495 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 MFSD12Q6NUT3 480 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 FIGNL1Q6PIW4 674 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 APOOLQ6UXV4 268 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 FAM214BQ7L5A3 538 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 GALNT10Q86SR1 603 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 MISPQ8IVT2 679 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 COX18Q8N8Q8 333 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 ZNF610Q8N9Z0 462 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 SLC16A11Q8NCK7 471 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 OR4C3Q8NH37 302 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 FBXO30Q8TB52 745 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 ACTRT2Q8TDY3 377 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 TWIST2Q8WVJ9 160 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 JADE3Q92613 823 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 PIGTQ969N2 578 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 ZBTB8AQ96BR9 441 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 PIK3IP1Q96FE7 263 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 CHMP6Q96FZ7 201 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 APOPT1Q96IL0 206 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 TUBB1Q9H4B7 451 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 FANCFQ9NPI8 374 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 DLL4Q9NR61 685 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 UBQLN4Q9NRR5 601 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 MKS1Q9NXB0 559 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 C6orf203Q9P0P8 240 aaPredicted RBP10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 MCTS1Q9ULC4 181 aaKnown RBP10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 TRAF6Q9Y4K3 522 aa10.57□□□□□ -0.72
NUDCD3-211ENST00000497978 MTORP42345 2549 aa10.56□□□□□ -0.72
NUDCD3-211ENST00000497978 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.56□□□□□ -0.72
NUDCD3-211ENST00000497978 A0A1W2PPR1 153 aa10.56□□□□□ -0.72
NUDCD3-211ENST00000497978 C7orf72A4D263 438 aa10.56□□□□□ -0.72
NUDCD3-211ENST00000497978 SHISA8B8ZZ34 492 aa10.56□□□□□ -0.72
NUDCD3-211ENST00000497978 RNF223E7ERA6 249 aa10.56□□□□□ -0.72
NUDCD3-211ENST00000497978 SMPD2O60906 423 aa10.56□□□□□ -0.72
NUDCD3-211ENST00000497978 SYNGR4O95473 234 aa10.56□□□□□ -0.72
NUDCD3-211ENST00000497978 CGAP01215 116 aa10.56□□□□□ -0.72
NUDCD3-211ENST00000497978 FGF4P08620 206 aa10.56□□□□□ -0.72
NUDCD3-211ENST00000497978 ACP2P11117 423 aa10.56□□□□□ -0.72
NUDCD3-211ENST00000497978 BCKDHAP12694 445 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms