RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 OR4C3Q8NH37 302 aa12.86□□□□□ -0.35
VTI1A-209ENST00000496445 PKNOX2Q96KN3 472 aa12.86□□□□□ -0.35
VTI1A-209ENST00000496445 FOXC2Q99958 501 aa12.86□□□□□ -0.35
VTI1A-209ENST00000496445 PIGQQ9BRB3 760 aa12.86□□□□□ -0.35
VTI1A-209ENST00000496445 YIPF4Q9BSR8 244 aa12.86□□□□□ -0.35
VTI1A-209ENST00000496445 TMEM109Q9BVC6 243 aa12.86□□□□□ -0.35
VTI1A-209ENST00000496445 PINK1Q9BXM7 581 aa12.86□□□□□ -0.35
VTI1A-209ENST00000496445 VDAC3Q9Y277 283 aa12.86□□□□□ -0.35
VTI1A-209ENST00000496445 PLEKHA6Q9Y2H5 1048 aa12.86□□□□□ -0.35
VTI1A-209ENST00000496445 A0A1W2PPR1 153 aa12.85□□□□□ -0.35
VTI1A-209ENST00000496445 TMEM114B3SHH9 223 aa12.85□□□□□ -0.35
VTI1A-209ENST00000496445 LINC01387J3KSC0 135 aa12.85□□□□□ -0.35
VTI1A-209ENST00000496445 HMGN2P05204 90 aaKnown RBP12.85□□□□□ -0.35
VTI1A-209ENST00000496445 CRHP06850 196 aa12.85□□□□□ -0.35
VTI1A-209ENST00000496445 TBXA2RP21731 343 aa12.85□□□□□ -0.35
VTI1A-209ENST00000496445 MAPK1P28482 360 aa12.85□□□□□ -0.35
VTI1A-209ENST00000496445 CCKARP32238 428 aa12.85□□□□□ -0.35
VTI1A-209ENST00000496445 KIR2DL2P43627 348 aaPredicted RBP12.85□□□□□ -0.35
VTI1A-209ENST00000496445 LASP1Q14847 261 aaKnown RBP12.85□□□□□ -0.35
VTI1A-209ENST00000496445 GUSBP1Q15486 140 aa12.85□□□□□ -0.35
VTI1A-209ENST00000496445 ATP6AP1LQ52LC2 224 aa12.85□□□□□ -0.35
VTI1A-209ENST00000496445 CCNJQ5T5M9 372 aa12.85□□□□□ -0.35
VTI1A-209ENST00000496445 ZCCHC12Q6PEW1 402 aa12.85□□□□□ -0.35
VTI1A-209ENST00000496445 PAMR1Q6UXH9 720 aa12.85□□□□□ -0.35
VTI1A-209ENST00000496445 LRIG3Q6UXM1 1119 aa12.85□□□□□ -0.35
VTI1A-209ENST00000496445 MREGQ8N565 214 aa12.85□□□□□ -0.35
VTI1A-209ENST00000496445 COX18Q8N8Q8 333 aa12.85□□□□□ -0.35
VTI1A-209ENST00000496445 CNEP1R1Q8N9A8 125 aa12.85□□□□□ -0.35
VTI1A-209ENST00000496445 GATSQ8NAP1 163 aa12.85□□□□□ -0.35
VTI1A-209ENST00000496445 GOT1L1Q8NHS2 421 aaPredicted RBP12.85□□□□□ -0.35
VTI1A-209ENST00000496445 PSMA8Q8TAA3 256 aa12.85□□□□□ -0.35
VTI1A-209ENST00000496445 FNDC9Q8TBE3 224 aa12.85□□□□□ -0.35
VTI1A-209ENST00000496445 SMPDL3BQ92485 455 aa12.85□□□□□ -0.35
VTI1A-209ENST00000496445 JADE3Q92613 823 aa12.85□□□□□ -0.35
VTI1A-209ENST00000496445 CXorf36Q9H7Y0 433 aa12.85□□□□□ -0.35
VTI1A-209ENST00000496445 RNF122Q9H9V4 155 aa12.85□□□□□ -0.35
VTI1A-209ENST00000496445 ZCCHC3Q9NUD5 404 aaKnown RBP12.85□□□□□ -0.35
VTI1A-209ENST00000496445 AP4B1Q9Y6B7 739 aa12.85□□□□□ -0.35
VTI1A-209ENST00000496445 A0A1W2PRB8 838 aa12.84□□□□□ -0.35
VTI1A-209ENST00000496445 SH3D21A4FU49 640 aa12.84□□□□□ -0.35
VTI1A-209ENST00000496445 MSTNO14793 375 aa12.84□□□□□ -0.35
VTI1A-209ENST00000496445 NDUFB5O43674 189 aa12.84□□□□□ -0.35
VTI1A-209ENST00000496445 TNFRSF21O75509 655 aa12.84□□□□□ -0.35
VTI1A-209ENST00000496445 LYPLA1O75608 230 aaPredicted RBP12.84□□□□□ -0.35
VTI1A-209ENST00000496445 HRGP04196 525 aa12.84□□□□□ -0.35
VTI1A-209ENST00000496445 ALOX5P09917 674 aa12.84□□□□□ -0.35
VTI1A-209ENST00000496445 ZNF17P17021 662 aa12.84□□□□□ -0.35
VTI1A-209ENST00000496445 PSMA4P25789 261 aaKnown RBP12.84□□□□□ -0.35
VTI1A-209ENST00000496445 RPL3P39023 403 aaKnown RBP12.84□□□□□ -0.35
VTI1A-209ENST00000496445 PRIM2P49643 509 aa12.84□□□□□ -0.35
VTI1A-209ENST00000496445 DIO3P55073 304 aa12.84□□□□□ -0.35
VTI1A-209ENST00000496445 EEFSECP57772 596 aaKnown RBP12.84□□□□□ -0.35
VTI1A-209ENST00000496445 SIRPAP78324 504 aa12.84□□□□□ -0.35
VTI1A-209ENST00000496445 ZNF844Q08AG5 666 aa12.84□□□□□ -0.35
VTI1A-209ENST00000496445 PON3Q15166 354 aa12.84□□□□□ -0.35
VTI1A-209ENST00000496445 CD226Q15762 336 aa12.84□□□□□ -0.35
VTI1A-209ENST00000496445 IL23RQ5VWK5 629 aa12.84□□□□□ -0.35
VTI1A-209ENST00000496445 OR2A2Q6IF42 318 aa12.84□□□□□ -0.35
VTI1A-209ENST00000496445 ZNF474Q6S9Z5 364 aaPredicted RBP12.84□□□□□ -0.35
VTI1A-209ENST00000496445 CHMP1BQ7LBR1 199 aa12.84□□□□□ -0.35
VTI1A-209ENST00000496445 BTLAQ7Z6A9 289 aa12.84□□□□□ -0.35
VTI1A-209ENST00000496445 HOMEZQ8IX15 550 aa12.84□□□□□ -0.35
VTI1A-209ENST00000496445 RIMKLAQ8IXN7 391 aa12.84□□□□□ -0.35
VTI1A-209ENST00000496445 FNDC5Q8NAU1 212 aa12.84□□□□□ -0.35
VTI1A-209ENST00000496445 CDS1Q92903 461 aa12.84□□□□□ -0.35
VTI1A-209ENST00000496445 ADGRG7Q96K78 797 aa12.84□□□□□ -0.35
VTI1A-209ENST00000496445 DACH2Q96NX9 599 aa12.84□□□□□ -0.35
VTI1A-209ENST00000496445 OPN3Q9H1Y3 402 aaPredicted RBP12.84□□□□□ -0.35
VTI1A-209ENST00000496445 PLEKHF2Q9H8W4 249 aa12.84□□□□□ -0.35
VTI1A-209ENST00000496445 GPATCH2Q9NW75 528 aa12.84□□□□□ -0.35
VTI1A-209ENST00000496445 ZNF175Q9Y473 711 aa12.84□□□□□ -0.35
VTI1A-209ENST00000496445 TESMINQ9Y4I5 508 aa12.84□□□□□ -0.35
VTI1A-209ENST00000496445 ACANP16112 2415 aa12.83□□□□□ -0.35
VTI1A-209ENST00000496445 ITM2AO43736 263 aa12.83□□□□□ -0.36
VTI1A-209ENST00000496445 AQP8O94778 261 aa12.83□□□□□ -0.36
VTI1A-209ENST00000496445 ATE1O95260 518 aa12.83□□□□□ -0.36
VTI1A-209ENST00000496445 C6orf47O95873 294 aa12.83□□□□□ -0.36
VTI1A-209ENST00000496445 CGAP01215 116 aa12.83□□□□□ -0.36
VTI1A-209ENST00000496445 LCN1P31025 176 aa12.83□□□□□ -0.36
VTI1A-209ENST00000496445 SERPINB4P48594 390 aa12.83□□□□□ -0.36
VTI1A-209ENST00000496445 EEF1A1P68104 462 aaKnown RBP12.83□□□□□ -0.36
VTI1A-209ENST00000496445 POU6F2P78424 691 aaPredicted RBP12.83□□□□□ -0.36
VTI1A-209ENST00000496445 OCRLQ01968 901 aa12.83□□□□□ -0.36
VTI1A-209ENST00000496445 FAM27E3Q08E93 113 aa12.83□□□□□ -0.36
VTI1A-209ENST00000496445 POU4F3Q15319 338 aa12.83□□□□□ -0.36
VTI1A-209ENST00000496445 CTU2Q2VPK5 515 aaKnown RBP12.83□□□□□ -0.36
VTI1A-209ENST00000496445 PLPPR5Q32ZL2 321 aa12.83□□□□□ -0.36
VTI1A-209ENST00000496445 CPTPQ5TA50 214 aa12.83□□□□□ -0.36
VTI1A-209ENST00000496445 EEF1A1P5Q5VTE0 462 aa12.83□□□□□ -0.36
VTI1A-209ENST00000496445 GTPBP8Q8N3Z3 284 aaPredicted RBP12.83□□□□□ -0.36
VTI1A-209ENST00000496445 POC1BQ8TC44 478 aa12.83□□□□□ -0.36
VTI1A-209ENST00000496445 OR5P2Q8WZ92 322 aa12.83□□□□□ -0.36
VTI1A-209ENST00000496445 COQ8BQ96D53 544 aa12.83□□□□□ -0.36
VTI1A-209ENST00000496445 PGM2Q96G03 612 aa12.83□□□□□ -0.36
VTI1A-209ENST00000496445 SH3YL1Q96HL8 342 aaPredicted RBP12.83□□□□□ -0.36
VTI1A-209ENST00000496445 STACQ99469 402 aa12.83□□□□□ -0.36
VTI1A-209ENST00000496445 BTBD2Q9BX70 525 aa12.83□□□□□ -0.36
VTI1A-209ENST00000496445 ZNF395Q9H8N7 513 aaPredicted RBP12.83□□□□□ -0.36
VTI1A-209ENST00000496445 DUSP22Q9NRW4 184 aa12.83□□□□□ -0.36
VTI1A-209ENST00000496445 MED17Q9NVC6 651 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms