RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	ANKRD33B	A6NCL7	494 aa		12.44	□□□□□ -0.42
APTX-231	ENST00000494973	OR5H15	A6NDH6	313 aa		12.44	□□□□□ -0.42
APTX-231	ENST00000494973	SERINC4	A6NH21	518 aa		12.44	□□□□□ -0.42
APTX-231	ENST00000494973	NDUFB5	O43674	189 aa		12.44	□□□□□ -0.42
APTX-231	ENST00000494973	ICOSLG	O75144	302 aa		12.44	□□□□□ -0.42
APTX-231	ENST00000494973	OR6B1	O95007	311 aa		12.44	□□□□□ -0.42
APTX-231	ENST00000494973	SNX4	O95219	450 aa		12.44	□□□□□ -0.42
APTX-231	ENST00000494973		P04436	131 aa		12.44	□□□□□ -0.42
APTX-231	ENST00000494973	ITGA2	P17301	1181 aa		12.44	□□□□□ -0.42
APTX-231	ENST00000494973	IFNA8	P32881	189 aa		12.44	□□□□□ -0.42
APTX-231	ENST00000494973	MSX2	P35548	267 aa	Predicted RBP	12.44	□□□□□ -0.42
APTX-231	ENST00000494973	KCNJ5	P48544	419 aa		12.44	□□□□□ -0.42
APTX-231	ENST00000494973	SUMO3	P55854	103 aa	Predicted RBP	12.44	□□□□□ -0.42
APTX-231	ENST00000494973	FBXW4	P57775	412 aa		12.44	□□□□□ -0.42
APTX-231	ENST00000494973	CHRNB3	Q05901	458 aa		12.44	□□□□□ -0.42
APTX-231	ENST00000494973	GRAMD1B	Q3KR37	738 aa		12.44	□□□□□ -0.42
APTX-231	ENST00000494973	KLHL26	Q53HC5	615 aa		12.44	□□□□□ -0.42
APTX-231	ENST00000494973	SLC22A10	Q63ZE4	541 aa		12.44	□□□□□ -0.42
APTX-231	ENST00000494973	B3GNTL1	Q67FW5	361 aa	Predicted RBP	12.44	□□□□□ -0.42
APTX-231	ENST00000494973	FCRLB	Q6BAA4	426 aa		12.44	□□□□□ -0.42
APTX-231	ENST00000494973	IL20RB	Q6UXL0	311 aa		12.44	□□□□□ -0.42
APTX-231	ENST00000494973	CYP2R1	Q6VVX0	501 aa		12.44	□□□□□ -0.42
APTX-231	ENST00000494973	FKBP9P1	Q75LS8	142 aa		12.44	□□□□□ -0.42
APTX-231	ENST00000494973	ZNF550	Q7Z398	422 aa		12.44	□□□□□ -0.42
APTX-231	ENST00000494973	GRAMD2A	Q8IUY3	354 aa		12.44	□□□□□ -0.42
APTX-231	ENST00000494973	PAQR8	Q8TEZ7	354 aa		12.44	□□□□□ -0.42
APTX-231	ENST00000494973	NR4A3	Q92570	626 aa		12.44	□□□□□ -0.42
APTX-231	ENST00000494973	PYURF	Q96I23	114 aa		12.44	□□□□□ -0.42
APTX-231	ENST00000494973	OSBPL11	Q9BXB4	747 aa		12.44	□□□□□ -0.42
APTX-231	ENST00000494973	EXOSC3	Q9NQT5	275 aa	Known RBP	12.44	□□□□□ -0.42
APTX-231	ENST00000494973	SACM1L	Q9NTJ5	587 aa		12.44	□□□□□ -0.42
APTX-231	ENST00000494973	KLRF1	Q9NZS2	232 aa		12.44	□□□□□ -0.42
APTX-231	ENST00000494973	LRFN1	Q9P244	771 aa		12.44	□□□□□ -0.42
APTX-231	ENST00000494973	GMPR2	Q9P2T1	348 aa	Known RBP	12.44	□□□□□ -0.42
APTX-231	ENST00000494973	DOCK10	Q96BY6	2186 aa		12.44	□□□□□ -0.42
APTX-231	ENST00000494973	CDHR4	A6H8M9	788 aa		12.43	□□□□□ -0.42
APTX-231	ENST00000494973		A6NL46	340 aa		12.43	□□□□□ -0.42
APTX-231	ENST00000494973	EIF4E2	O60573	245 aa	Known RBP	12.43	□□□□□ -0.42
APTX-231	ENST00000494973	FKBP6	O75344	327 aa		12.43	□□□□□ -0.42
APTX-231	ENST00000494973	DNAJB5	O75953	348 aa		12.43	□□□□□ -0.42
APTX-231	ENST00000494973	SORBS2	O94875	1100 aa	Known RBP	12.43	□□□□□ -0.42
APTX-231	ENST00000494973	ZIC2	O95409	532 aa	Predicted RBP	12.43	□□□□□ -0.42
APTX-231	ENST00000494973	CSTA	P01040	98 aa		12.43	□□□□□ -0.42
APTX-231	ENST00000494973	UBL4A	P11441	157 aa		12.43	□□□□□ -0.42
APTX-231	ENST00000494973	FCGR1A	P12314	374 aa		12.43	□□□□□ -0.42
APTX-231	ENST00000494973	CD46	P15529	392 aa		12.43	□□□□□ -0.42
APTX-231	ENST00000494973	SLC6A8	P48029	635 aa		12.43	□□□□□ -0.42
APTX-231	ENST00000494973	KCNJ10	P78508	379 aa		12.43	□□□□□ -0.42
APTX-231	ENST00000494973	ARG2	P78540	354 aa		12.43	□□□□□ -0.42
APTX-231	ENST00000494973	C17orf67	Q0P5P2	114 aa		12.43	□□□□□ -0.42
APTX-231	ENST00000494973	KPNB1	Q14974	876 aa	Known RBP	12.43	□□□□□ -0.42
APTX-231	ENST00000494973	PDZK1	Q5T2W1	519 aa		12.43	□□□□□ -0.42
APTX-231	ENST00000494973	IGFL2	Q6UWQ7	119 aa		12.43	□□□□□ -0.42
APTX-231	ENST00000494973	C16orf47	Q6ZP98	133 aa	Predicted RBP	12.43	□□□□□ -0.42
APTX-231	ENST00000494973	RANBP3L	Q86VV4	465 aa	Predicted RBP	12.43	□□□□□ -0.42
APTX-231	ENST00000494973	POGLUT1	Q8NBL1	392 aa		12.43	□□□□□ -0.42
APTX-231	ENST00000494973	OR10G3	Q8NGC4	313 aa		12.43	□□□□□ -0.42
APTX-231	ENST00000494973	RNF138	Q8WVD3	245 aa		12.43	□□□□□ -0.42
APTX-231	ENST00000494973	HAS2	Q92819	552 aa		12.43	□□□□□ -0.42
APTX-231	ENST00000494973	TPD52L3	Q96J77	140 aa		12.43	□□□□□ -0.42
APTX-231	ENST00000494973	HSH2D	Q96JZ2	352 aa		12.43	□□□□□ -0.42
APTX-231	ENST00000494973	C5orf34	Q96MH7	638 aa		12.43	□□□□□ -0.42
APTX-231	ENST00000494973	SMAD5	Q99717	465 aa	Known RBP	12.43	□□□□□ -0.42
APTX-231	ENST00000494973	POLR2J2	Q9GZM3	115 aa	Known RBP	12.43	□□□□□ -0.42
APTX-231	ENST00000494973	POLR2J3	Q9H1A7	115 aa	Known RBP	12.43	□□□□□ -0.42
APTX-231	ENST00000494973	DENND2D	Q9H6A0	471 aa	Predicted RBP	12.43	□□□□□ -0.42
APTX-231	ENST00000494973	ZNF552	Q9H707	407 aa	Predicted RBP	12.43	□□□□□ -0.42
APTX-231	ENST00000494973	CPNE5	Q9HCH3	593 aa		12.43	□□□□□ -0.42
APTX-231	ENST00000494973	FBXO34	Q9NWN3	711 aa		12.43	□□□□□ -0.42
APTX-231	ENST00000494973	TES	Q9UGI8	421 aa	Known RBP	12.43	□□□□□ -0.42
APTX-231	ENST00000494973	KLF13	Q9Y2Y9	288 aa	Predicted RBP	12.43	□□□□□ -0.42
APTX-231	ENST00000494973	TCRBV5S2	A0A599	114 aa		12.42	□□□□□ -0.42
APTX-231	ENST00000494973	GTPBP1	O00178	669 aa	Known RBP	12.42	□□□□□ -0.42
APTX-231	ENST00000494973	MASP2	O00187	686 aa		12.42	□□□□□ -0.42
APTX-231	ENST00000494973	ZNF264	O43296	627 aa		12.42	□□□□□ -0.42
APTX-231	ENST00000494973	FADS1	O60427	444 aa		12.42	□□□□□ -0.42
APTX-231	ENST00000494973	GCM2	O75603	506 aa	Predicted RBP	12.42	□□□□□ -0.42
APTX-231	ENST00000494973	OPN1SW	P03999	348 aa		12.42	□□□□□ -0.42
APTX-231	ENST00000494973	IFNW1	P05000	195 aa		12.42	□□□□□ -0.42
APTX-231	ENST00000494973	FES	P07332	822 aa		12.42	□□□□□ -0.42
APTX-231	ENST00000494973	RAP2A	P10114	183 aa		12.42	□□□□□ -0.42
APTX-231	ENST00000494973	CD247	P20963	164 aa		12.42	□□□□□ -0.42
APTX-231	ENST00000494973	ELAVL4	P26378	380 aa	Known RBP	12.42	□□□□□ -0.42
APTX-231	ENST00000494973	MSX1	P28360	303 aa		12.42	□□□□□ -0.42
APTX-231	ENST00000494973	EEF1A1	P68104	462 aa	Known RBP	12.42	□□□□□ -0.42
APTX-231	ENST00000494973	CXADR	P78310	365 aa		12.42	□□□□□ -0.42
APTX-231	ENST00000494973	DMTN	Q08495	405 aa		12.42	□□□□□ -0.42
APTX-231	ENST00000494973	TUBA3C	Q13748	450 aa		12.42	□□□□□ -0.42
APTX-231	ENST00000494973	MRPL2	Q5T653	305 aa	Known RBP	12.42	□□□□□ -0.42
APTX-231	ENST00000494973	AAGAB	Q6PD74	315 aa		12.42	□□□□□ -0.42
APTX-231	ENST00000494973	TUBA3E	Q6PEY2	450 aa		12.42	□□□□□ -0.42
APTX-231	ENST00000494973	ZNF836	Q6ZNA1	936 aa		12.42	□□□□□ -0.42
APTX-231	ENST00000494973	LINC00696	Q6ZRV3	163 aa		12.42	□□□□□ -0.42
APTX-231	ENST00000494973	ZAR1	Q86SH2	424 aa		12.42	□□□□□ -0.42
APTX-231	ENST00000494973	GALNT10	Q86SR1	603 aa		12.42	□□□□□ -0.42
APTX-231	ENST00000494973	CYP4Z1	Q86W10	505 aa		12.42	□□□□□ -0.42
APTX-231	ENST00000494973	SMYD1	Q8NB12	490 aa		12.42	□□□□□ -0.42
APTX-231	ENST00000494973	TMEM178A	Q8NBL3	297 aa		12.42	□□□□□ -0.42
APTX-231	ENST00000494973	FDCSP	Q8NFU4	85 aa		12.42	□□□□□ -0.42
APTX-231	ENST00000494973	OR4C3	Q8NH37	302 aa		12.42	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms