RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 CARNS1A5YM72 827 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 SYT5O00445 386 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 PLPP2O43688 288 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 PPM1BO75688 479 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 HRGP04196 525 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 ACSM4P0C7M7 580 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 ICAM2P13598 275 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 GABRR2P28476 465 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 EPHA4P54764 986 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 RAB33AQ14088 237 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 NIPAL3Q6P499 406 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 SZRD1Q7Z422 152 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 LUZP2Q86TE4 346 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 OR5AR1Q8NGP9 310 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 C16orf58Q96GQ5 468 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 LINC00052Q96N35 136 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 AIFM2Q9BRQ8 373 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 MENTQ9BUN1 341 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 ZNF436Q9C0F3 470 aaPredicted RBP14.32□□□□□ -0.12
SDF4-207ENST00000494748 MED20Q9H944 212 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 SAGE1Q9NXZ1 904 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 A0A0B4J203 849 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 A0A0G2JPF8 293 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 A0A1W2PS29 197 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 HNRNPCL2B2RXH8 293 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 HNRNPCL3B7ZW38 293 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 PAPLNO95428 1278 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 MT-ND4P03905 459 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 H2AFB2P0C5Z0 115 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 HNRNPCL4P0DMR1 293 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 AHRP35869 848 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 EPHB3P54753 998 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 RNASE12Q5GAN4 147 aaKnown RBP14.32□□□□□ -0.12
SDF4-207ENST00000494748 PLEKHM3Q6ZWE6 761 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 TOMM5Q8N4H5 51 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 OR5W2Q8NH69 310 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 SPATA5L1Q9BVQ7 753 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 OR2AG1Q9H205 316 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 WASH6PQ9NQA3 447 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 MRPL17Q9NRX2 175 aaKnown RBP14.32□□□□□ -0.12
SDF4-207ENST00000494748 CCL26Q9Y258 94 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 SNRNP200O75643 2136 aaKnown RBP14.32□□□□□ -0.12
SDF4-207ENST00000494748 MFSD2BA6NFX1 497 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 ELNP15502 786 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 IFNGR2P38484 337 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 DECR1Q16698 335 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 TMEM255AQ5JRV8 349 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 ZNF793Q6ZN11 406 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 C16orf62Q7Z3J2 963 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 C11orf96Q7Z7L8 435 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 PIGXQ8TBF5 258 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 TMEM255BQ8WV15 326 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 AUTS2Q8WXX7 1259 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 SORCS1Q8WY21 1168 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 RBCK1Q9BYM8 510 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 ENKD1Q9H0I2 346 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 OR52A5Q9H2C5 316 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 ANKRD19PQ9H560 264 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 COPZ2Q9P299 210 aa14.32□□□□□ -0.12
SDF4-207ENST00000494748 MANSC4A6NHS7 340 aaPredicted RBP14.31□□□□□ -0.12
SDF4-207ENST00000494748 SOD2P04179 222 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 HMGN2P05204 90 aaKnown RBP14.31□□□□□ -0.12
SDF4-207ENST00000494748 PSMB5P28074 263 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 GBX2P52951 348 aaPredicted RBP14.31□□□□□ -0.12
SDF4-207ENST00000494748 DHODHQ02127 395 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 ZNF750Q32MQ0 723 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 Q6ZTK2 550 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 CXXC5Q7LFL8 322 aaKnown RBP14.31□□□□□ -0.12
SDF4-207ENST00000494748 ADCK2Q7Z695 626 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 TPRA1Q86W33 373 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 NRMQ8IXM6 262 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 ACBD7Q8N6N7 88 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 ZNF527Q8NB42 609 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 COQ10AQ96MF6 247 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 FAIM2Q9BWQ8 316 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 CLEC4MQ9H2X3 399 aaPredicted RBP14.31□□□□□ -0.12
SDF4-207ENST00000494748 TAC3Q9UHF0 121 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 C4orf51C9J302 202 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 UBL3O95164 117 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 ALPPL2P10696 532 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 ATF4P18848 351 aaPredicted RBP14.31□□□□□ -0.12
SDF4-207ENST00000494748 ZP3P21754 424 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 REEP5Q00765 189 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 LASP1Q14847 261 aaKnown RBP14.31□□□□□ -0.12
SDF4-207ENST00000494748 ESPNLQ6ZVH7 1005 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 CDH24Q86UP0 819 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 NUDT13Q86X67 352 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 OR11G2Q8NGC1 345 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 ABHD4Q8TB40 342 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 ACOT11Q8WXI4 607 aaPredicted RBP14.31□□□□□ -0.12
SDF4-207ENST00000494748 SAMD8Q96LT4 415 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 C12orf66Q96MD2 445 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 CAMK1GQ96NX5 476 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 TBX5Q99593 518 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 DPH7Q9BTV6 452 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 PPA2Q9H2U2 334 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 KIF25Q9UIL4 384 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 NDUFS4O43181 175 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 IL9P15248 144 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 SIM1P81133 766 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms