RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 ENKD1Q9H0I2 346 aa20.5■□□□□ 0.87
SNIP1-203ENST00000493916 RPH3AQ9Y2J0 694 aaPredicted RBP20.5■□□□□ 0.87
SNIP1-203ENST00000493916 ARHGAP21Q5T5U3 1957 aa20.5■□□□□ 0.87
SNIP1-203ENST00000493916 MBD3L4A6NDZ8 208 aaPredicted RBP20.49■□□□□ 0.87
SNIP1-203ENST00000493916 MBD3L3A6NE82 208 aaPredicted RBP20.49■□□□□ 0.87
SNIP1-203ENST00000493916 MBD3L5A6NJ08 208 aaPredicted RBP20.49■□□□□ 0.87
SNIP1-203ENST00000493916 HMGB1P1B2RPK0 211 aaPredicted RBP20.49■□□□□ 0.87
SNIP1-203ENST00000493916 H0Y3Z8 333 aa20.49■□□□□ 0.87
SNIP1-203ENST00000493916 LINC01387J3KSC0 135 aa20.49■□□□□ 0.87
SNIP1-203ENST00000493916 SCDO00767 359 aa20.49■□□□□ 0.87
SNIP1-203ENST00000493916 ZNF195O14628 629 aa20.49■□□□□ 0.87
SNIP1-203ENST00000493916 NDUFB5O43674 189 aa20.49■□□□□ 0.87
SNIP1-203ENST00000493916 HPGDP15428 266 aa20.49■□□□□ 0.87
SNIP1-203ENST00000493916 ZNF708P17019 499 aa20.49■□□□□ 0.87
SNIP1-203ENST00000493916 IGFBP2P18065 325 aa20.49■□□□□ 0.87
SNIP1-203ENST00000493916 ATP6V1C1P21283 382 aa20.49■□□□□ 0.87
SNIP1-203ENST00000493916 MSX1P28360 303 aa20.49■□□□□ 0.87
SNIP1-203ENST00000493916 S100A3P33764 101 aa20.49■□□□□ 0.87
SNIP1-203ENST00000493916 CLDN18P56856 261 aa20.49■□□□□ 0.87
SNIP1-203ENST00000493916 UFM1P61960 85 aa20.49■□□□□ 0.87
SNIP1-203ENST00000493916 SLC9B1Q4ZJI4 515 aa20.49■□□□□ 0.87
SNIP1-203ENST00000493916 C6orf120Q7Z4R8 191 aa20.49■□□□□ 0.87
SNIP1-203ENST00000493916 ADGRE4PQ86SQ3 457 aa20.49■□□□□ 0.87
SNIP1-203ENST00000493916 ANKRD46Q86W74 232 aa20.49■□□□□ 0.87
SNIP1-203ENST00000493916 LIX1LQ8IVB5 337 aa20.49■□□□□ 0.87
SNIP1-203ENST00000493916 GOLGA6L1Q8N7Z2 621 aa20.49■□□□□ 0.87
SNIP1-203ENST00000493916 NAXEQ8NCW5 288 aa20.49■□□□□ 0.87
SNIP1-203ENST00000493916 TNIP2Q8NFZ5 429 aa20.49■□□□□ 0.87
SNIP1-203ENST00000493916 GOT1L1Q8NHS2 421 aaPredicted RBP20.49■□□□□ 0.87
SNIP1-203ENST00000493916 MBD3L2Q8NHZ7 208 aaPredicted RBP20.49■□□□□ 0.87
SNIP1-203ENST00000493916 MIPOL1Q8TD10 442 aa20.49■□□□□ 0.87
SNIP1-203ENST00000493916 SLC35G5Q96KT7 338 aa20.49■□□□□ 0.87
SNIP1-203ENST00000493916 CCDC115Q96NT0 180 aa20.49■□□□□ 0.87
SNIP1-203ENST00000493916 UCN2Q96RP3 112 aa20.49■□□□□ 0.87
SNIP1-203ENST00000493916 TUBA1CQ9BQE3 449 aa20.49■□□□□ 0.87
SNIP1-203ENST00000493916 HOXD1Q9GZZ0 328 aa20.49■□□□□ 0.87
SNIP1-203ENST00000493916 SERHL2Q9H4I8 314 aa20.49■□□□□ 0.87
SNIP1-203ENST00000493916 NPDC1Q9NQX5 325 aaPredicted RBP20.49■□□□□ 0.87
SNIP1-203ENST00000493916 BTNL2Q9UIR0 455 aa20.49■□□□□ 0.87
SNIP1-203ENST00000493916 KCNE3Q9Y6H6 103 aa20.49■□□□□ 0.87
SNIP1-203ENST00000493916 DCHS2Q6V1P9 2916 aa20.48■□□□□ 0.87
SNIP1-203ENST00000493916 DUXAA6NLW8 204 aa20.48■□□□□ 0.87
SNIP1-203ENST00000493916 IL2RAP01589 272 aa20.48■□□□□ 0.87
SNIP1-203ENST00000493916 IDO1P14902 403 aa20.48■□□□□ 0.87
SNIP1-203ENST00000493916 UQCRC2P22695 453 aa20.48■□□□□ 0.87
SNIP1-203ENST00000493916 TCEA1P23193 301 aaKnown RBP20.48■□□□□ 0.87
SNIP1-203ENST00000493916 IL12AP29459 219 aa20.48■□□□□ 0.87
SNIP1-203ENST00000493916 STARP49675 285 aa20.48■□□□□ 0.87
SNIP1-203ENST00000493916 NME5P56597 212 aa20.48■□□□□ 0.87
SNIP1-203ENST00000493916 RPS26P62854 115 aaKnown RBP20.48■□□□□ 0.87
SNIP1-203ENST00000493916 PDCD4Q53EL6 469 aaKnown RBP20.48■□□□□ 0.87
SNIP1-203ENST00000493916 RAET1LQ5VY80 246 aa20.48■□□□□ 0.87
SNIP1-203ENST00000493916 MCEMP1Q8IX19 187 aa20.48■□□□□ 0.87
SNIP1-203ENST00000493916 GLB1L3Q8NCI6 653 aaPredicted RBP20.48■□□□□ 0.87
SNIP1-203ENST00000493916 OR5D16Q8NGK9 328 aa20.48■□□□□ 0.87
SNIP1-203ENST00000493916 LRRC8CQ8TDW0 803 aa20.48■□□□□ 0.87
SNIP1-203ENST00000493916 PIGQQ9BRB3 760 aa20.48■□□□□ 0.87
SNIP1-203ENST00000493916 FBN2P35556 2912 aa20.48■□□□□ 0.87
SNIP1-203ENST00000493916 AK1P00568 194 aa20.47■□□□□ 0.87
SNIP1-203ENST00000493916 PRF1P14222 555 aa20.47■□□□□ 0.87
SNIP1-203ENST00000493916 MATN1P21941 496 aa20.47■□□□□ 0.87
SNIP1-203ENST00000493916 SRYQ05066 204 aa20.47■□□□□ 0.87
SNIP1-203ENST00000493916 TMEM44Q2T9K0 475 aa20.47■□□□□ 0.87
SNIP1-203ENST00000493916 NXNQ6DKJ4 435 aa20.47■□□□□ 0.87
SNIP1-203ENST00000493916 CLEC4FQ8N1N0 589 aa20.47■□□□□ 0.87
SNIP1-203ENST00000493916 ZNF527Q8NB42 609 aa20.47■□□□□ 0.87
SNIP1-203ENST00000493916 CHDHQ8NE62 594 aaPredicted RBP20.47■□□□□ 0.87
SNIP1-203ENST00000493916 ZBTB18Q99592 522 aa20.47■□□□□ 0.87
SNIP1-203ENST00000493916 TRIM8Q9BZR9 551 aa20.47■□□□□ 0.87
SNIP1-203ENST00000493916 USH1CQ9Y6N9 552 aa20.47■□□□□ 0.87
SNIP1-203ENST00000493916 APCP25054 2843 aa20.46■□□□□ 0.87
SNIP1-203ENST00000493916 LRBAP50851 2863 aa20.46■□□□□ 0.87
SNIP1-203ENST00000493916 A0A087WZY1 265 aa20.46■□□□□ 0.87
SNIP1-203ENST00000493916 OR2M5A3KFT3 312 aa20.46■□□□□ 0.87
SNIP1-203ENST00000493916 NPIPB9F8W1W9 429 aa20.46■□□□□ 0.87
SNIP1-203ENST00000493916 PGRP06401 933 aa20.46■□□□□ 0.87
SNIP1-203ENST00000493916 SNRPB2P08579 225 aaKnown RBP20.46■□□□□ 0.87
SNIP1-203ENST00000493916 PEPDP12955 493 aa20.46■□□□□ 0.87
SNIP1-203ENST00000493916 ZNF17P17021 662 aa20.46■□□□□ 0.87
SNIP1-203ENST00000493916 POU3F2P20265 443 aaPredicted RBP20.46■□□□□ 0.87
SNIP1-203ENST00000493916 LRRC74AQ0VAA2 488 aa20.46■□□□□ 0.87
SNIP1-203ENST00000493916 CD226Q15762 336 aa20.46■□□□□ 0.87
SNIP1-203ENST00000493916 GSTA3Q16772 222 aa20.46■□□□□ 0.87
SNIP1-203ENST00000493916 FLYWCH1Q4VC44 716 aa20.46■□□□□ 0.87
SNIP1-203ENST00000493916 KLHL26Q53HC5 615 aa20.46■□□□□ 0.87
SNIP1-203ENST00000493916 SAXO2Q658L1 398 aa20.46■□□□□ 0.87
SNIP1-203ENST00000493916 MTERF4Q7Z6M4 381 aaKnown RBP20.46■□□□□ 0.87
SNIP1-203ENST00000493916 GATSQ8NAP1 163 aa20.46■□□□□ 0.87
SNIP1-203ENST00000493916 NEURL3Q96EH8 262 aa20.46■□□□□ 0.87
SNIP1-203ENST00000493916 CLCF1Q9UBD9 225 aa20.46■□□□□ 0.87
SNIP1-203ENST00000493916 ZNF629Q9UEG4 869 aaPredicted RBP20.46■□□□□ 0.87
SNIP1-203ENST00000493916 CLCA1A8K7I4 914 aa20.45■□□□□ 0.86
SNIP1-203ENST00000493916 DVL2O14641 736 aa20.45■□□□□ 0.86
SNIP1-203ENST00000493916 HCRTR2O43614 444 aa20.45■□□□□ 0.86
SNIP1-203ENST00000493916 CPSF4O95639 269 aaKnown RBP20.45■□□□□ 0.86
SNIP1-203ENST00000493916 ZNF136P52737 540 aa20.45■□□□□ 0.86
SNIP1-203ENST00000493916 DGKQP52824 942 aa20.45■□□□□ 0.86
SNIP1-203ENST00000493916 ATP12AP54707 1039 aa20.45■□□□□ 0.86
SNIP1-203ENST00000493916 POMZP3Q6PJE2 187 aa20.45■□□□□ 0.86
SNIP1-203ENST00000493916 EPGNQ6UW88 154 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms