RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 FGF17O60258 216 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 KIAA0513O60268 411 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 PCDHGA12O60330 932 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 RDH16O75452 317 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 PRKRAO75569 313 aaKnown RBP9.31□□□□□ -0.92
PRPF3-206ENST00000493553 GASTP01350 101 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 ENDOUP21128 410 aaKnown RBP9.31□□□□□ -0.92
PRPF3-206ENST00000493553 SLC5A2P31639 672 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 HOXD12P35452 270 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 POLR2IP36954 125 aaKnown RBP9.31□□□□□ -0.92
PRPF3-206ENST00000493553 STAT5AP42229 794 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 STT3AP46977 705 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 SERPINB10P48595 397 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 SMSP52788 366 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 FUT5Q11128 374 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 ZNF155Q12901 538 aaPredicted RBP9.31□□□□□ -0.92
PRPF3-206ENST00000493553 TARDBPQ13148 414 aaKnown RBP eCLIP9.31□□□□□ -0.92
PRPF3-206ENST00000493553 SLC13A2Q13183 592 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 SQSTM1Q13501 440 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 PTGES3Q15185 160 aaKnown RBP9.31□□□□□ -0.92
PRPF3-206ENST00000493553 LTB4RQ15722 352 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 TBCEQ15813 527 aaPredicted RBP9.31□□□□□ -0.92
PRPF3-206ENST00000493553 ZNF750Q32MQ0 723 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 TIMM50Q3ZCQ8 353 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 DCST2Q5T1A1 773 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 GPR107Q5VW38 600 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 GTF2IRD2BQ6EKJ0 949 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 XAF1Q6GPH4 301 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 PGBD2Q6P3X8 592 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 WDR74Q6RFH5 385 aaPredicted RBP9.31□□□□□ -0.92
PRPF3-206ENST00000493553 KLHL17Q6TDP4 642 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 ISLR2Q6UXK2 745 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 FRRS1Q6ZNA5 592 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 PLEKHM3Q6ZWE6 761 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 PRSS42Q7Z5A4 293 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 GTF2IRD2Q86UP8 949 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 ANKRD13BQ86YJ7 626 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 ZNF440Q8IYI8 595 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 GPR135Q8IZ08 494 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 CDK20Q8IZL9 346 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 STX19Q8N4C7 294 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 CLDN22Q8N7P3 220 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 SLC16A11Q8NCK7 471 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 OR9Q2Q8NGE9 314 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 OR9A4Q8NGU2 314 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 CNIH3Q8TBE1 160 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 SLC7A13Q8TCU3 470 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 GPR151Q8TDV0 419 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 ACOT11Q8WXI4 607 aaPredicted RBP9.31□□□□□ -0.92
PRPF3-206ENST00000493553 CDS1Q92903 461 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 RIT1Q92963 219 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 UCN3Q969E3 161 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 UBE2FQ969M7 185 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 ANKRD9Q96BM1 317 aaPredicted RBP9.31□□□□□ -0.92
PRPF3-206ENST00000493553 C12orf43Q96C57 262 aaKnown RBP9.31□□□□□ -0.92
PRPF3-206ENST00000493553 MPP4Q96JB8 637 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 ART5Q96L15 291 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 HS6ST2Q96MM7 605 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 DGAT2Q96PD7 388 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 SLC38A2Q96QD8 506 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 CCNL2Q96S94 520 aaPredicted RBP9.31□□□□□ -0.92
PRPF3-206ENST00000493553 CSF3RQ99062 836 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 MAP3K3Q99759 626 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 ZNF559Q9BR84 538 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 YIPF4Q9BSR8 244 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 LMF2Q9BU23 707 aaKnown RBP9.31□□□□□ -0.92
PRPF3-206ENST00000493553 TRIM2Q9C040 744 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 HOXD1Q9GZZ0 328 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 KLHL25Q9H0H3 589 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 Q9N2J8 555 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 ADAP2Q9NPF8 381 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 PRTFDC1Q9NRG1 225 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 MED17Q9NVC6 651 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 LRIT1Q9P2V4 623 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 FTSJ1Q9UET6 329 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 TESQ9UGI8 421 aaKnown RBP9.31□□□□□ -0.92
PRPF3-206ENST00000493553 SERTAD3Q9UJW9 196 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 MRTO4Q9UKD2 239 aaKnown RBP9.31□□□□□ -0.92
PRPF3-206ENST00000493553 RNF6Q9Y252 685 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 ZNF443Q9Y2A4 671 aaPredicted RBP9.31□□□□□ -0.92
PRPF3-206ENST00000493553 RPL36Q9Y3U8 105 aaKnown RBP9.31□□□□□ -0.92
PRPF3-206ENST00000493553 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.31□□□□□ -0.92
PRPF3-206ENST00000493553 MDC1Q14676 2089 aaKnown RBP9.31□□□□□ -0.92
PRPF3-206ENST00000493553 RANBP2P49792 3224 aaKnown RBP9.31□□□□□ -0.92
PRPF3-206ENST00000493553 GON4LQ3T8J9 2241 aa9.31□□□□□ -0.92
PRPF3-206ENST00000493553 TRAPPC13A5PLN9 417 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 ZNF860A6NHJ4 632 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 TMEM150CB9EJG8 249 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 H3BN98 237 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 J3KTA2 159 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 K7ESF4 209 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 SGK494L7N484 410 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 XPNPEP2O43895 674 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 BRINP1O60477 761 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 WBP4O75554 376 aaKnown RBP9.3□□□□□ -0.92
PRPF3-206ENST00000493553 RECKO95980 971 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 HMGN1P05114 100 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 ACP2P11117 423 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 RPS4Y1P22090 263 aaKnown RBP9.3□□□□□ -0.92
PRPF3-206ENST00000493553 CHMP24386 653 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms