RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-206ENST00000492233 THOC3Q96J01 351 aaKnown RBP3.54□□□□□ -1.84
ATPAF1-206ENST00000492233 EGLN2Q96KS0 407 aa3.54□□□□□ -1.84
ATPAF1-206ENST00000492233 TSSK3Q96PN8 268 aa3.54□□□□□ -1.84
ATPAF1-206ENST00000492233 OR2A14Q96R47 310 aa3.54□□□□□ -1.84
ATPAF1-206ENST00000492233 CITED1Q99966 193 aa3.54□□□□□ -1.84
ATPAF1-206ENST00000492233 SPATA5L1Q9BVQ7 753 aa3.54□□□□□ -1.84
ATPAF1-206ENST00000492233 RIOK2Q9BVS4 552 aaKnown RBP3.54□□□□□ -1.84
ATPAF1-206ENST00000492233 ATG10Q9H0Y0 220 aa3.54□□□□□ -1.84
ATPAF1-206ENST00000492233 ING2Q9H160 280 aa3.54□□□□□ -1.84
ATPAF1-206ENST00000492233 ZDHHC6Q9H6R6 413 aa3.54□□□□□ -1.84
ATPAF1-206ENST00000492233 SRD5A3Q9H8P0 318 aa3.54□□□□□ -1.84
ATPAF1-206ENST00000492233 FN3KRPQ9HA64 309 aa3.54□□□□□ -1.84
ATPAF1-206ENST00000492233 NEK6Q9HC98 313 aa3.54□□□□□ -1.84
ATPAF1-206ENST00000492233 GCM1Q9NP62 436 aa3.54□□□□□ -1.84
ATPAF1-206ENST00000492233 IL1RAPQ9NPH3 570 aa3.54□□□□□ -1.84
ATPAF1-206ENST00000492233 SPHK2Q9NRA0 654 aa3.54□□□□□ -1.84
ATPAF1-206ENST00000492233 ERVK13-1Q9NX77 482 aa3.54□□□□□ -1.84
ATPAF1-206ENST00000492233 STOX2Q9P2F5 926 aaPredicted RBP3.54□□□□□ -1.84
ATPAF1-206ENST00000492233 MYOTQ9UBF9 498 aa3.54□□□□□ -1.84
ATPAF1-206ENST00000492233 VPS29Q9UBQ0 182 aa3.54□□□□□ -1.84
ATPAF1-206ENST00000492233 HSPB7Q9UBY9 170 aa3.54□□□□□ -1.84
ATPAF1-206ENST00000492233 UTS2RQ9UKP6 389 aa3.54□□□□□ -1.84
ATPAF1-206ENST00000492233 SLC22A14Q9Y267 594 aa3.54□□□□□ -1.84
ATPAF1-206ENST00000492233 TSC22D4Q9Y3Q8 395 aa3.54□□□□□ -1.84
ATPAF1-206ENST00000492233 CMAHPQ9Y471 501 aa3.54□□□□□ -1.84
ATPAF1-206ENST00000492233 IRAK3Q9Y616 596 aa3.54□□□□□ -1.84
ATPAF1-206ENST00000492233 MICAL3Q7RTP6 2002 aa3.54□□□□□ -1.84
ATPAF1-206ENST00000492233 PLXNA4Q9HCM2 1894 aa3.54□□□□□ -1.84
ATPAF1-206ENST00000492233 HTTP42858 3142 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 SCN8AQ9UQD0 1980 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 A0A0B4J293 547 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 A0A1W2PR48 441 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 C1orf226A1L170 272 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 SH3PXD2BA1X283 911 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 PIPSLA2A3N6 862 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 SLC35F4A4IF30 521 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 OR52A4PA6NMU1 304 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 C4orf47A7E2U8 309 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 FADS2P1A8MWK0 482 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 MAGEB17A8MXT2 336 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 E7EQ34 232 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 NEDD8-MDP1E9PL57 170 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 SLC1A7O00341 560 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 FOXE1O00358 373 aaPredicted RBP3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 RNASET2O00584 256 aaKnown RBP3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 FPGTO14772 594 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 BCKDKO14874 412 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 YY2O15391 372 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 CCL16O15467 120 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 ARHGEF9O43307 516 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 ZNF208O43345 1280 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 B4GAT1O43505 415 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 LANCL1O43813 399 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 NOBOXO60393 691 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 ATG13O75143 517 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 CLN5O75503 358 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 JRKO75564 520 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 LEFTY1O75610 366 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 SLC25A12O75746 678 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 GABARAPO95166 117 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 LRATO95237 230 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 TIMP1P01033 207 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 FABP3P05413 133 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 CTSLP07711 333 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 CISD3P0C7P0 127 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 ZNF888P0CJ79 500 aaPredicted RBP3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 LYL1P12980 280 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 CYP4B1P13584 511 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 F3P13726 295 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 APEHP13798 732 aaKnown RBP3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 ENGP17813 658 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 POLR2EP19388 210 aaKnown RBP3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 EFNA1P20827 205 aaPredicted RBP3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 PCMT1P22061 227 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 IDSP22304 550 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 PRKACGP22612 351 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 EEF1B2P24534 225 aaKnown RBP3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 IGFBP5P24593 272 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 ITGB8P26012 769 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 IMPA1P29218 277 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 NTSR1P30989 418 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 HOXA6P31267 233 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 HOXA9P31269 272 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 TIA1P31483 386 aaKnown RBP eCLIP3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 KDELR2P33947 212 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 MMP12P39900 470 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 VIPR2P41587 438 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 PXNP49023 591 aaPredicted RBP3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 CEBPDP49716 269 aaPredicted RBP3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 DAPP51397 102 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 ARHGDIAP52565 204 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 CTSCP53634 463 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 ITGA1P56199 1179 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 PCBP4P57723 403 aaKnown RBP3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 TSPAN5P62079 268 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 RAE1P78406 368 aaKnown RBP3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 MVKQ03426 396 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 ACSM2AQ08AH3 577 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 RASGEF1BQ0VAM2 473 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 CDK5R2Q13319 367 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms