RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 ACBD3Q9H3P7 528 aa13.66□□□□□ -0.22
USP39-217ENST00000491659 PIGUQ9H490 435 aa13.66□□□□□ -0.22
USP39-217ENST00000491659 MEAF6Q9HAF1 191 aa13.66□□□□□ -0.22
USP39-217ENST00000491659 TMBIM4Q9HC24 238 aa13.66□□□□□ -0.22
USP39-217ENST00000491659 UBQLN4Q9NRR5 601 aa13.66□□□□□ -0.22
USP39-217ENST00000491659 PNPOQ9NVS9 261 aa13.66□□□□□ -0.22
USP39-217ENST00000491659 CLCF1Q9UBD9 225 aa13.66□□□□□ -0.22
USP39-217ENST00000491659 KCNN3Q9UGI6 736 aa13.66□□□□□ -0.22
USP39-217ENST00000491659 ENO4A6NNW6 628 aa13.65□□□□□ -0.22
USP39-217ENST00000491659 H3BML4 177 aa13.65□□□□□ -0.22
USP39-217ENST00000491659 GMFGO60234 142 aa13.65□□□□□ -0.22
USP39-217ENST00000491659 IL18BPO95998 194 aa13.65□□□□□ -0.22
USP39-217ENST00000491659 TMIGD3P0DMS9 266 aaPredicted RBP13.65□□□□□ -0.22
USP39-217ENST00000491659 CLNS1AP54105 237 aaKnown RBP13.65□□□□□ -0.22
USP39-217ENST00000491659 EEFSECP57772 596 aaKnown RBP13.65□□□□□ -0.22
USP39-217ENST00000491659 HBA1P69905 142 aa13.65□□□□□ -0.22
USP39-217ENST00000491659 DPY19L1Q2PZI1 675 aa13.65□□□□□ -0.22
USP39-217ENST00000491659 GLYR1Q49A26 553 aaPredicted RBP13.65□□□□□ -0.22
USP39-217ENST00000491659 DCST2Q5T1A1 773 aa13.65□□□□□ -0.22
USP39-217ENST00000491659 ATG16L1Q676U5 607 aa13.65□□□□□ -0.22
USP39-217ENST00000491659 OR4F3Q6IEY1 312 aa13.65□□□□□ -0.22
USP39-217ENST00000491659 APOOLQ6UXV4 268 aa13.65□□□□□ -0.22
USP39-217ENST00000491659 P4HA3Q7Z4N8 544 aa13.65□□□□□ -0.22
USP39-217ENST00000491659 ADGRE4PQ86SQ3 457 aa13.65□□□□□ -0.22
USP39-217ENST00000491659 UBQLNLQ8IYU4 475 aa13.65□□□□□ -0.22
USP39-217ENST00000491659 GATSQ8NAP1 163 aa13.65□□□□□ -0.22
USP39-217ENST00000491659 OR8J2Q8NGG1 315 aa13.65□□□□□ -0.22
USP39-217ENST00000491659 OR4C3Q8NH37 302 aa13.65□□□□□ -0.22
USP39-217ENST00000491659 RAB3IL1Q8TBN0 382 aa13.65□□□□□ -0.22
USP39-217ENST00000491659 WNT2BQ93097 391 aa13.65□□□□□ -0.22
USP39-217ENST00000491659 TLCD1Q96CP7 247 aa13.65□□□□□ -0.22
USP39-217ENST00000491659 UCN2Q96RP3 112 aa13.65□□□□□ -0.22
USP39-217ENST00000491659 MCCC2Q9HCC0 563 aa13.65□□□□□ -0.22
USP39-217ENST00000491659 THAP1Q9NVV9 213 aa13.65□□□□□ -0.22
USP39-217ENST00000491659 GPATCH2Q9NW75 528 aa13.65□□□□□ -0.22
USP39-217ENST00000491659 FOXD3Q9UJU5 478 aaPredicted RBP13.65□□□□□ -0.22
USP39-217ENST00000491659 PCDHGB4Q9UN71 923 aa13.65□□□□□ -0.22
USP39-217ENST00000491659 PCNX3Q9H6A9 2034 aa13.64□□□□□ -0.23
USP39-217ENST00000491659 LRBAP50851 2863 aa13.64□□□□□ -0.23
USP39-217ENST00000491659 RNF103-CHMP3A0A140T963 221 aa13.64□□□□□ -0.23
USP39-217ENST00000491659 A0A1W2PQD3 144 aa13.64□□□□□ -0.23
USP39-217ENST00000491659 OR2M5A3KFT3 312 aa13.64□□□□□ -0.23
USP39-217ENST00000491659 TRPC5OSA6NMA1 111 aa13.64□□□□□ -0.23
USP39-217ENST00000491659 EEF1E1-BLOC1S5C9J1V9 151 aa13.64□□□□□ -0.23
USP39-217ENST00000491659 RNASET2O00584 256 aaKnown RBP13.64□□□□□ -0.23
USP39-217ENST00000491659 SEC14L5O43304 696 aa13.64□□□□□ -0.23
USP39-217ENST00000491659 EEF1E1O43324 174 aaKnown RBP13.64□□□□□ -0.23
USP39-217ENST00000491659 ANXA8L1Q5VT79 327 aa13.64□□□□□ -0.23
USP39-217ENST00000491659 OGFOD2Q6N063 350 aa13.64□□□□□ -0.23
USP39-217ENST00000491659 ARSKQ6UWY0 536 aa13.64□□□□□ -0.23
USP39-217ENST00000491659 ZAR1Q86SH2 424 aa13.64□□□□□ -0.23
USP39-217ENST00000491659 CLECL1Q8IZS7 167 aa13.64□□□□□ -0.23
USP39-217ENST00000491659 ZNF527Q8NB42 609 aa13.64□□□□□ -0.23
USP39-217ENST00000491659 VPS37AQ8NEZ2 397 aa13.64□□□□□ -0.23
USP39-217ENST00000491659 OR4A15Q8NGL6 344 aa13.64□□□□□ -0.23
USP39-217ENST00000491659 OR5M1Q8NGP8 315 aa13.64□□□□□ -0.23
USP39-217ENST00000491659 RNASE6Q93091 150 aaKnown RBP13.64□□□□□ -0.23
USP39-217ENST00000491659 SLC35G5Q96KT7 338 aa13.64□□□□□ -0.23
USP39-217ENST00000491659 OR7D2Q96RA2 312 aa13.64□□□□□ -0.23
USP39-217ENST00000491659 SH3GL2Q99962 352 aa13.64□□□□□ -0.23
USP39-217ENST00000491659 SFXN3Q9BWM7 321 aa13.64□□□□□ -0.23
USP39-217ENST00000491659 HOXD1Q9GZZ0 328 aa13.64□□□□□ -0.23
USP39-217ENST00000491659 FBXO34Q9NWN3 711 aa13.64□□□□□ -0.23
USP39-217ENST00000491659 STOML1Q9UBI4 398 aa13.64□□□□□ -0.23
USP39-217ENST00000491659 MARCOQ9UEW3 520 aaPredicted RBP13.64□□□□□ -0.23
USP39-217ENST00000491659 VDAC3Q9Y277 283 aa13.64□□□□□ -0.23
USP39-217ENST00000491659 L3MBTL1Q9Y468 752 aa13.64□□□□□ -0.23
USP39-217ENST00000491659 NUP214P35658 2090 aaPredicted RBP13.63□□□□□ -0.23
USP39-217ENST00000491659 FBN2P35556 2912 aa13.63□□□□□ -0.23
USP39-217ENST00000491659 A0A087WZY1 265 aa13.63□□□□□ -0.23
USP39-217ENST00000491659 SLCO1B7G3V0H7 640 aa13.63□□□□□ -0.23
USP39-217ENST00000491659 SYT5O00445 386 aa13.63□□□□□ -0.23
USP39-217ENST00000491659 SDHDO14521 159 aa13.63□□□□□ -0.23
USP39-217ENST00000491659 HDAC3O15379 428 aa13.63□□□□□ -0.23
USP39-217ENST00000491659 HCRTR2O43614 444 aa13.63□□□□□ -0.23
USP39-217ENST00000491659 SNNO75324 88 aaPredicted RBP13.63□□□□□ -0.23
USP39-217ENST00000491659 RCBTB2O95199 551 aa13.63□□□□□ -0.23
USP39-217ENST00000491659 ZNF17P17021 662 aa13.63□□□□□ -0.23
USP39-217ENST00000491659 CAPN3P20807 821 aa13.63□□□□□ -0.23
USP39-217ENST00000491659 ZNF41P51814 821 aaPredicted RBP13.63□□□□□ -0.23
USP39-217ENST00000491659 RPS3AP61247 264 aaKnown RBP13.63□□□□□ -0.23
USP39-217ENST00000491659 CASP8Q14790 479 aa13.63□□□□□ -0.23
USP39-217ENST00000491659 FBXL19-AS1Q494R0 122 aa13.63□□□□□ -0.23
USP39-217ENST00000491659 POMZP3Q6PJE2 187 aa13.63□□□□□ -0.23
USP39-217ENST00000491659 TMEM200AQ86VY9 491 aa13.63□□□□□ -0.23
USP39-217ENST00000491659 SMPDL3BQ92485 455 aa13.63□□□□□ -0.23
USP39-217ENST00000491659 TESCQ96BS2 214 aa13.63□□□□□ -0.23
USP39-217ENST00000491659 SH3YL1Q96HL8 342 aaPredicted RBP13.63□□□□□ -0.23
USP39-217ENST00000491659 MANSC1Q9H8J5 431 aa13.63□□□□□ -0.23
USP39-217ENST00000491659 ZNF337Q9Y3M9 751 aa13.63□□□□□ -0.23
USP39-217ENST00000491659 AP4B1Q9Y6B7 739 aa13.63□□□□□ -0.23
USP39-217ENST00000491659 MED12LQ86YW9 2145 aa13.63□□□□□ -0.23
USP39-217ENST00000491659 ADGRG4Q8IZF6 3080 aa13.62□□□□□ -0.23
USP39-217ENST00000491659 SLC22A20A6NK97 555 aa13.62□□□□□ -0.23
USP39-217ENST00000491659 DUXAA6NLW8 204 aa13.62□□□□□ -0.23
USP39-217ENST00000491659 E9PBE3 544 aa13.62□□□□□ -0.23
USP39-217ENST00000491659 H3BNH8 94 aa13.62□□□□□ -0.23
USP39-217ENST00000491659 ANKRD28O15084 1053 aa13.62□□□□□ -0.23
USP39-217ENST00000491659 AK1P00568 194 aa13.62□□□□□ -0.23
USP39-217ENST00000491659 KITP10721 976 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms