RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 HMGN2P05204 90 aaKnown RBP16.22■□□□□ 0.19
HMGN1-219ENST00000491183 RPL3P39023 403 aaKnown RBP16.22■□□□□ 0.19
HMGN1-219ENST00000491183 PRIM2P49643 509 aa16.22■□□□□ 0.19
HMGN1-219ENST00000491183 CCNJQ5T5M9 372 aa16.22■□□□□ 0.19
HMGN1-219ENST00000491183 CPTPQ5TA50 214 aa16.22■□□□□ 0.19
HMGN1-219ENST00000491183 P4HA3Q7Z4N8 544 aa16.22■□□□□ 0.19
HMGN1-219ENST00000491183 GATSQ8NAP1 163 aa16.22■□□□□ 0.19
HMGN1-219ENST00000491183 PSMA8Q8TAA3 256 aa16.22■□□□□ 0.19
HMGN1-219ENST00000491183 OR5P2Q8WZ92 322 aa16.22■□□□□ 0.19
HMGN1-219ENST00000491183 TUBGCP3Q96CW5 907 aa16.22■□□□□ 0.19
HMGN1-219ENST00000491183 STARD4Q96DR4 205 aa16.22■□□□□ 0.19
HMGN1-219ENST00000491183 ZNF845Q96IR2 970 aaPredicted RBP16.22■□□□□ 0.19
HMGN1-219ENST00000491183 NPAS1Q99742 590 aa16.22■□□□□ 0.19
HMGN1-219ENST00000491183 KLHDC3Q9BQ90 382 aa16.22■□□□□ 0.19
HMGN1-219ENST00000491183 C20orf27Q9GZN8 174 aa16.22■□□□□ 0.19
HMGN1-219ENST00000491183 CXorf36Q9H7Y0 433 aa16.22■□□□□ 0.19
HMGN1-219ENST00000491183 MED13LQ71F56 2210 aa16.22■□□□□ 0.19
HMGN1-219ENST00000491183 AKAP6Q13023 2319 aa16.21■□□□□ 0.19
HMGN1-219ENST00000491183 RGS16O15492 202 aaPredicted RBP16.21■□□□□ 0.19
HMGN1-219ENST00000491183 C6orf47O95873 294 aa16.21■□□□□ 0.19
HMGN1-219ENST00000491183 CRHP06850 196 aa16.21■□□□□ 0.19
HMGN1-219ENST00000491183 G6PDP11413 515 aa16.21■□□□□ 0.19
HMGN1-219ENST00000491183 DDX5P17844 614 aaKnown RBP16.21■□□□□ 0.19
HMGN1-219ENST00000491183 CCT3P49368 545 aaKnown RBP16.21■□□□□ 0.19
HMGN1-219ENST00000491183 ART1P52961 327 aa16.21■□□□□ 0.19
HMGN1-219ENST00000491183 EEFSECP57772 596 aaKnown RBP16.21■□□□□ 0.19
HMGN1-219ENST00000491183 EEF1A1P68104 462 aaKnown RBP16.21■□□□□ 0.19
HMGN1-219ENST00000491183 LASP1Q14847 261 aaKnown RBP16.21■□□□□ 0.19
HMGN1-219ENST00000491183 EEF1A1P5Q5VTE0 462 aa16.21■□□□□ 0.19
HMGN1-219ENST00000491183 VWA1Q6PCB0 445 aa16.21■□□□□ 0.19
HMGN1-219ENST00000491183 COX18Q8N8Q8 333 aa16.21■□□□□ 0.19
HMGN1-219ENST00000491183 JADE3Q92613 823 aa16.21■□□□□ 0.19
HMGN1-219ENST00000491183 CDS1Q92903 461 aa16.21■□□□□ 0.19
HMGN1-219ENST00000491183 ZBTB9Q96C00 473 aa16.21■□□□□ 0.19
HMGN1-219ENST00000491183 BTBD2Q9BX70 525 aa16.21■□□□□ 0.19
HMGN1-219ENST00000491183 PINK1Q9BXM7 581 aa16.21■□□□□ 0.19
HMGN1-219ENST00000491183 PIGUQ9H490 435 aa16.21■□□□□ 0.19
HMGN1-219ENST00000491183 UBQLN4Q9NRR5 601 aa16.21■□□□□ 0.19
HMGN1-219ENST00000491183 PACSIN3Q9UKS6 424 aa16.21■□□□□ 0.19
HMGN1-219ENST00000491183 VDAC3Q9Y277 283 aa16.21■□□□□ 0.19
HMGN1-219ENST00000491183 SNX8Q9Y5X2 465 aa16.21■□□□□ 0.19
HMGN1-219ENST00000491183 AP4B1Q9Y6B7 739 aa16.21■□□□□ 0.19
HMGN1-219ENST00000491183 KCNE3Q9Y6H6 103 aa16.21■□□□□ 0.19
HMGN1-219ENST00000491183 HSPA4LO95757 839 aa16.2■□□□□ 0.18
HMGN1-219ENST00000491183 DHRS4L1P0CG22 281 aa16.2■□□□□ 0.18
HMGN1-219ENST00000491183 PRPS1L1P21108 318 aa16.2■□□□□ 0.18
HMGN1-219ENST00000491183 LCN1P31025 176 aa16.2■□□□□ 0.18
HMGN1-219ENST00000491183 KIR2DL2P43627 348 aaPredicted RBP16.2■□□□□ 0.18
HMGN1-219ENST00000491183 CPA2P48052 419 aa16.2■□□□□ 0.18
HMGN1-219ENST00000491183 POU6F2P78424 691 aaPredicted RBP16.2■□□□□ 0.18
HMGN1-219ENST00000491183 EMX2Q04743 252 aa16.2■□□□□ 0.18
HMGN1-219ENST00000491183 MPP2Q14168 576 aa16.2■□□□□ 0.18
HMGN1-219ENST00000491183 CD226Q15762 336 aa16.2■□□□□ 0.18
HMGN1-219ENST00000491183 CHI3L2Q15782 390 aa16.2■□□□□ 0.18
HMGN1-219ENST00000491183 TNFAIP8L3Q5GJ75 292 aa16.2■□□□□ 0.18
HMGN1-219ENST00000491183 OR2A2Q6IF42 318 aa16.2■□□□□ 0.18
HMGN1-219ENST00000491183 CDC73Q6P1J9 531 aa16.2■□□□□ 0.18
HMGN1-219ENST00000491183 BTLAQ7Z6A9 289 aa16.2■□□□□ 0.18
HMGN1-219ENST00000491183 GGNQ86UU5 652 aa16.2■□□□□ 0.18
HMGN1-219ENST00000491183 METTL25Q8N6Q8 603 aa16.2■□□□□ 0.18
HMGN1-219ENST00000491183 ZNF781Q8N8C0 355 aa16.2■□□□□ 0.18
HMGN1-219ENST00000491183 FNDC9Q8TBE3 224 aa16.2■□□□□ 0.18
HMGN1-219ENST00000491183 SMPDL3BQ92485 455 aa16.2■□□□□ 0.18
HMGN1-219ENST00000491183 STACQ99469 402 aa16.2■□□□□ 0.18
HMGN1-219ENST00000491183 RNF122Q9H9V4 155 aa16.2■□□□□ 0.18
HMGN1-219ENST00000491183 SSU72Q9NP77 194 aaKnown RBP16.2■□□□□ 0.18
HMGN1-219ENST00000491183 DUSP22Q9NRW4 184 aa16.2■□□□□ 0.18
HMGN1-219ENST00000491183 CCM2LQ9NUG4 571 aaPredicted RBP16.2■□□□□ 0.18
HMGN1-219ENST00000491183 ATAD3AQ9NVI7 634 aa16.2■□□□□ 0.18
HMGN1-219ENST00000491183 GPATCH2Q9NW75 528 aa16.2■□□□□ 0.18
HMGN1-219ENST00000491183 GIN1Q9NXP7 522 aa16.2■□□□□ 0.18
HMGN1-219ENST00000491183 ST6GALNAC2Q9UJ37 374 aa16.2■□□□□ 0.18
HMGN1-219ENST00000491183 RAB21Q9UL25 225 aa16.2■□□□□ 0.18
HMGN1-219ENST00000491183 HRNRQ86YZ3 2850 aaPredicted RBP16.19■□□□□ 0.18
HMGN1-219ENST00000491183 MSTNO14793 375 aa16.19■□□□□ 0.18
HMGN1-219ENST00000491183 BIRC5O15392 142 aa16.19■□□□□ 0.18
HMGN1-219ENST00000491183 SERPINE1P05121 402 aa16.19■□□□□ 0.18
HMGN1-219ENST00000491183 PSMA4P25789 261 aaKnown RBP16.19■□□□□ 0.18
HMGN1-219ENST00000491183 CLDN8P56748 225 aa16.19■□□□□ 0.18
HMGN1-219ENST00000491183 C21orf58P58505 322 aa16.19■□□□□ 0.18
HMGN1-219ENST00000491183 ABCE1P61221 599 aaKnown RBP16.19■□□□□ 0.18
HMGN1-219ENST00000491183 PON3Q15166 354 aa16.19■□□□□ 0.18
HMGN1-219ENST00000491183 LSM12Q3MHD2 195 aaKnown RBP16.19■□□□□ 0.18
HMGN1-219ENST00000491183 NATD1Q8N6N6 113 aa16.19■□□□□ 0.18
HMGN1-219ENST00000491183 CNEP1R1Q8N9A8 125 aa16.19■□□□□ 0.18
HMGN1-219ENST00000491183 PPP1R14CQ8TAE6 165 aa16.19■□□□□ 0.18
HMGN1-219ENST00000491183 NINJ1Q92982 152 aa16.19■□□□□ 0.18
HMGN1-219ENST00000491183 PRPF18Q99633 342 aaKnown RBP16.19■□□□□ 0.18
HMGN1-219ENST00000491183 ACTRT3Q9BYD9 372 aa16.19■□□□□ 0.18
HMGN1-219ENST00000491183 BHLHE41Q9C0J9 482 aaPredicted RBP16.19■□□□□ 0.18
HMGN1-219ENST00000491183 EIF3LQ9Y262 564 aaKnown RBP16.19■□□□□ 0.18
HMGN1-219ENST00000491183 ZNF175Q9Y473 711 aa16.19■□□□□ 0.18
HMGN1-219ENST00000491183 PRRC2AP48634 2157 aaKnown RBP16.19■□□□□ 0.18
HMGN1-219ENST00000491183 A0A087WZY1 265 aa16.18■□□□□ 0.18
HMGN1-219ENST00000491183 A0A1W2PQD3 144 aa16.18■□□□□ 0.18
HMGN1-219ENST00000491183 SCDO00767 359 aa16.18■□□□□ 0.18
HMGN1-219ENST00000491183 SMNDC1O75940 238 aaKnown RBP eCLIP16.18■□□□□ 0.184e-7■■■■□ 21.6
HMGN1-219ENST00000491183 CGAP01215 116 aa16.18■□□□□ 0.18
HMGN1-219ENST00000491183 HBA1P69905 142 aa16.18■□□□□ 0.18
HMGN1-219ENST00000491183 SIRPAP78324 504 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms