RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 KLHL17Q6TDP4 642 aa12□□□□□ -0.49
EXOSC3-207ENST00000490516 P2RY8Q86VZ1 359 aa12□□□□□ -0.49
EXOSC3-207ENST00000490516 FAM110BQ8TC76 370 aa12□□□□□ -0.49
EXOSC3-207ENST00000490516 SLC9A6Q92581 669 aa12□□□□□ -0.49
EXOSC3-207ENST00000490516 KLHL29Q96CT2 875 aa12□□□□□ -0.49
EXOSC3-207ENST00000490516 CNRIP1Q96F85 164 aaPredicted RBP12□□□□□ -0.49
EXOSC3-207ENST00000490516 RNF145Q96MT1 663 aa12□□□□□ -0.49
EXOSC3-207ENST00000490516 JMJD8Q96S16 334 aa12□□□□□ -0.49
EXOSC3-207ENST00000490516 ESM1Q9NQ30 184 aa12□□□□□ -0.49
EXOSC3-207ENST00000490516 OPTCQ9UBM4 332 aa12□□□□□ -0.49
EXOSC3-207ENST00000490516 ABCG2Q9UNQ0 655 aa12□□□□□ -0.49
EXOSC3-207ENST00000490516 PCDHGA11Q9Y5H2 935 aa12□□□□□ -0.49
EXOSC3-207ENST00000490516 K7EPI3 171 aa11.99□□□□□ -0.49
EXOSC3-207ENST00000490516 RAD51DO75771 328 aa11.99□□□□□ -0.49
EXOSC3-207ENST00000490516 PRKD3O94806 890 aa11.99□□□□□ -0.49
EXOSC3-207ENST00000490516 WISP3O95389 354 aaPredicted RBP11.99□□□□□ -0.49
EXOSC3-207ENST00000490516 CD1DP15813 335 aa11.99□□□□□ -0.49
EXOSC3-207ENST00000490516 COX5AP20674 150 aa11.99□□□□□ -0.49
EXOSC3-207ENST00000490516 EPHA1P21709 976 aa11.99□□□□□ -0.49
EXOSC3-207ENST00000490516 PSMA4P25789 261 aaKnown RBP11.99□□□□□ -0.49
EXOSC3-207ENST00000490516 PIK3CGP48736 1102 aa11.99□□□□□ -0.49
EXOSC3-207ENST00000490516 PHC1P78364 1004 aa11.99□□□□□ -0.49
EXOSC3-207ENST00000490516 FOXL1Q12952 345 aa11.99□□□□□ -0.49
EXOSC3-207ENST00000490516 CSTF3Q12996 717 aaKnown RBP11.99□□□□□ -0.49
EXOSC3-207ENST00000490516 TRIP10Q15642 601 aa11.99□□□□□ -0.49
EXOSC3-207ENST00000490516 CPSF6Q16630 551 aaKnown RBP eCLIP11.99□□□□□ -0.49
EXOSC3-207ENST00000490516 ZNF628Q5EBL2 1059 aa11.99□□□□□ -0.49
EXOSC3-207ENST00000490516 SH2D4BQ5SQS7 431 aa11.99□□□□□ -0.49
EXOSC3-207ENST00000490516 HP1BP3Q5SSJ5 553 aaPredicted RBP11.99□□□□□ -0.49
EXOSC3-207ENST00000490516 PDSS1Q5T2R2 415 aa11.99□□□□□ -0.49
EXOSC3-207ENST00000490516 SHQ1Q6PI26 577 aaKnown RBP11.99□□□□□ -0.49
EXOSC3-207ENST00000490516 FCRLAQ7L513 359 aa11.99□□□□□ -0.49
EXOSC3-207ENST00000490516 SSX8Q7RTT4 187 aa11.99□□□□□ -0.49
EXOSC3-207ENST00000490516 GLCCI1Q86VQ1 547 aa11.99□□□□□ -0.49
EXOSC3-207ENST00000490516 GTPBP8Q8N3Z3 284 aaPredicted RBP11.99□□□□□ -0.49
EXOSC3-207ENST00000490516 ZNF433Q8N7K0 673 aaPredicted RBP11.99□□□□□ -0.49
EXOSC3-207ENST00000490516 FBF1Q8TES7 1133 aa11.99□□□□□ -0.49
EXOSC3-207ENST00000490516 CFAP36Q96G28 342 aa11.99□□□□□ -0.49
EXOSC3-207ENST00000490516 ZNF681Q96N22 645 aa11.99□□□□□ -0.49
EXOSC3-207ENST00000490516 FAM120CQ9NX05 1096 aaKnown RBP11.99□□□□□ -0.49
EXOSC3-207ENST00000490516 USP22Q9UPT9 525 aa11.99□□□□□ -0.49
EXOSC3-207ENST00000490516 WBP11Q9Y2W2 641 aaKnown RBP11.99□□□□□ -0.49
EXOSC3-207ENST00000490516 SPEF1Q9Y4P9 236 aa11.99□□□□□ -0.49
EXOSC3-207ENST00000490516 SLC25A15Q9Y619 301 aa11.99□□□□□ -0.49
EXOSC3-207ENST00000490516 IGLV3-32A0A0A0MS00 114 aa11.98□□□□□ -0.49
EXOSC3-207ENST00000490516 C1orf226A1L170 272 aa11.98□□□□□ -0.49
EXOSC3-207ENST00000490516 C9JVG2 144 aa11.98□□□□□ -0.49
EXOSC3-207ENST00000490516 H0YIV9 168 aa11.98□□□□□ -0.49
EXOSC3-207ENST00000490516 IL33O95760 270 aa11.98□□□□□ -0.49
EXOSC3-207ENST00000490516 ANGPTL1O95841 491 aa11.98□□□□□ -0.49
EXOSC3-207ENST00000490516 GIFP27352 417 aa11.98□□□□□ -0.49
EXOSC3-207ENST00000490516 SFTPDP35247 375 aa11.98□□□□□ -0.49
EXOSC3-207ENST00000490516 C17orf67Q0P5P2 114 aa11.98□□□□□ -0.49
EXOSC3-207ENST00000490516 MORF4L2Q15014 288 aa11.98□□□□□ -0.49
EXOSC3-207ENST00000490516 CCNYL2Q5T2Q4 361 aa11.98□□□□□ -0.49
EXOSC3-207ENST00000490516 APOOLQ6UXV4 268 aa11.98□□□□□ -0.49
EXOSC3-207ENST00000490516 SLC46A3Q7Z3Q1 461 aa11.98□□□□□ -0.49
EXOSC3-207ENST00000490516 CCDC116Q8IYX3 515 aa11.98□□□□□ -0.49
EXOSC3-207ENST00000490516 TEX9Q8N6V9 391 aa11.98□□□□□ -0.49
EXOSC3-207ENST00000490516 ZDHHC22Q8N966 263 aa11.98□□□□□ -0.49
EXOSC3-207ENST00000490516 NUP43Q8NFH3 380 aa11.98□□□□□ -0.49
EXOSC3-207ENST00000490516 WDR20Q8TBZ3 569 aa11.98□□□□□ -0.49
EXOSC3-207ENST00000490516 MAIP1Q8WWC4 291 aa11.98□□□□□ -0.49
EXOSC3-207ENST00000490516 ZNF775Q96BV0 537 aaPredicted RBP11.98□□□□□ -0.49
EXOSC3-207ENST00000490516 KLHL15Q96M94 604 aa11.98□□□□□ -0.49
EXOSC3-207ENST00000490516 PKP2Q99959 881 aa11.98□□□□□ -0.49
EXOSC3-207ENST00000490516 DESI2Q9BSY9 194 aa11.98□□□□□ -0.49
EXOSC3-207ENST00000490516 MRPL1Q9BYD6 325 aaKnown RBP11.98□□□□□ -0.49
EXOSC3-207ENST00000490516 TSPY26PQ9H489 355 aa11.98□□□□□ -0.49
EXOSC3-207ENST00000490516 CXorf36Q9H7Y0 433 aa11.98□□□□□ -0.49
EXOSC3-207ENST00000490516 CAB39LQ9H9S4 337 aa11.98□□□□□ -0.49
EXOSC3-207ENST00000490516 POPDC3Q9HBV1 291 aa11.98□□□□□ -0.49
EXOSC3-207ENST00000490516 ING1Q9UK53 422 aaPredicted RBP11.98□□□□□ -0.49
EXOSC3-207ENST00000490516 TRAF6Q9Y4K3 522 aa11.98□□□□□ -0.49
EXOSC3-207ENST00000490516 IGHV3-15A0A0B4J1V0 119 aa11.97□□□□□ -0.49
EXOSC3-207ENST00000490516 GOLGA6L10A0A0M3HER8 536 aa11.97□□□□□ -0.49
EXOSC3-207ENST00000490516 ATP6V1G2-DDX39BF2Z307 99 aa11.97□□□□□ -0.49
EXOSC3-207ENST00000490516 PHGDHO43175 533 aaKnown RBP11.97□□□□□ -0.49
EXOSC3-207ENST00000490516 BCAS2O75934 225 aaPredicted RBP11.97□□□□□ -0.49
EXOSC3-207ENST00000490516 SNUPNO95149 360 aaKnown RBP11.97□□□□□ -0.49
EXOSC3-207ENST00000490516 HKR1P10072 659 aa11.97□□□□□ -0.49
EXOSC3-207ENST00000490516 ME2P23368 584 aa11.97□□□□□ -0.49
EXOSC3-207ENST00000490516 RFX3P48380 749 aa11.97□□□□□ -0.49
EXOSC3-207ENST00000490516 CLK3P49761 638 aaKnown RBP11.97□□□□□ -0.49
EXOSC3-207ENST00000490516 MAPK12P53778 367 aa11.97□□□□□ -0.49
EXOSC3-207ENST00000490516 SNRPD2P62316 118 aaKnown RBP11.97□□□□□ -0.49
EXOSC3-207ENST00000490516 PSPHP78330 225 aa11.97□□□□□ -0.49
EXOSC3-207ENST00000490516 PSG6Q00889 435 aa11.97□□□□□ -0.49
EXOSC3-207ENST00000490516 MLC1Q15049 377 aa11.97□□□□□ -0.49
EXOSC3-207ENST00000490516 ERCC6LQ2NKX8 1250 aa11.97□□□□□ -0.49
EXOSC3-207ENST00000490516 CPTPQ5TA50 214 aa11.97□□□□□ -0.49
EXOSC3-207ENST00000490516 LIPJQ5W064 366 aa11.97□□□□□ -0.49
EXOSC3-207ENST00000490516 PPIL6Q8IXY8 311 aa11.97□□□□□ -0.49
EXOSC3-207ENST00000490516 LILRA2Q8N149 483 aa11.97□□□□□ -0.49
EXOSC3-207ENST00000490516 TRIM58Q8NG06 486 aa11.97□□□□□ -0.49
EXOSC3-207ENST00000490516 OR9A2Q8NGT5 310 aa11.97□□□□□ -0.49
EXOSC3-207ENST00000490516 POC1BQ8TC44 478 aa11.97□□□□□ -0.49
EXOSC3-207ENST00000490516 ZNF675Q8TD23 568 aa11.97□□□□□ -0.49
EXOSC3-207ENST00000490516 CPNE4Q96A23 557 aaPredicted RBP11.97□□□□□ -0.49
EXOSC3-207ENST00000490516 KLHDC3Q9BQ90 382 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms