RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 CNPY3Q9BT09 278 aa3.32□□□□□ -1.88
CCDC39-206ENST00000489868 NMNAT2Q9BZQ4 307 aa3.32□□□□□ -1.88
CCDC39-206ENST00000489868 COMMD4Q9H0A8 199 aa3.32□□□□□ -1.88
CCDC39-206ENST00000489868 CAB39LQ9H9S4 337 aa3.32□□□□□ -1.88
CCDC39-206ENST00000489868 SPASTQ9UBP0 616 aa3.32□□□□□ -1.88
CCDC39-206ENST00000489868 RIMS3Q9UJD0 308 aa3.32□□□□□ -1.88
CCDC39-206ENST00000489868 SAMD4AQ9UPU9 718 aaKnown RBP3.32□□□□□ -1.88
CCDC39-206ENST00000489868 SPAG9O60271 1321 aaKnown RBP3.32□□□□□ -1.88
CCDC39-206ENST00000489868 CDC42BPBQ9Y5S2 1711 aa3.31□□□□□ -1.88
CCDC39-206ENST00000489868 COL4A4P53420 1690 aaPredicted RBP3.31□□□□□ -1.88
CCDC39-206ENST00000489868 LRRC30A6NM36 301 aa3.31□□□□□ -1.88
CCDC39-206ENST00000489868 CCER2I3L3R5 266 aa3.31□□□□□ -1.88
CCDC39-206ENST00000489868 LGALS8O00214 317 aa3.31□□□□□ -1.88
CCDC39-206ENST00000489868 MMP23AO75900 390 aa3.31□□□□□ -1.88
CCDC39-206ENST00000489868 ANXA4P09525 319 aaPredicted RBP3.31□□□□□ -1.88
CCDC39-206ENST00000489868 OR8U8P0C7N1 319 aa3.31□□□□□ -1.88
CCDC39-206ENST00000489868 ZNF17P17021 662 aa3.31□□□□□ -1.88
CCDC39-206ENST00000489868 CCNE1P24864 410 aa3.31□□□□□ -1.88
CCDC39-206ENST00000489868 SLC26A5P58743 744 aa3.31□□□□□ -1.88
CCDC39-206ENST00000489868 ST3GAL3Q11203 375 aa3.31□□□□□ -1.88
CCDC39-206ENST00000489868 EXOSC2Q13868 293 aaKnown RBP3.31□□□□□ -1.88
CCDC39-206ENST00000489868 ZNF658BQ4V348 819 aaPredicted RBP3.31□□□□□ -1.88
CCDC39-206ENST00000489868 METTL11BQ5VVY1 283 aa3.31□□□□□ -1.88
CCDC39-206ENST00000489868 TMEM184AQ6ZMB5 413 aa3.31□□□□□ -1.88
CCDC39-206ENST00000489868 LPCAT2Q7L5N7 544 aa3.31□□□□□ -1.88
CCDC39-206ENST00000489868 PPP1R27Q86WC6 154 aa3.31□□□□□ -1.88
CCDC39-206ENST00000489868 ZBTB44Q8NCP5 570 aa3.31□□□□□ -1.88
CCDC39-206ENST00000489868 OR56B1Q8NGI3 324 aa3.31□□□□□ -1.88
CCDC39-206ENST00000489868 UPRTQ96BW1 309 aa3.31□□□□□ -1.88
CCDC39-206ENST00000489868 ELMO2Q96JJ3 720 aa3.31□□□□□ -1.88
CCDC39-206ENST00000489868 ATG10Q9H0Y0 220 aa3.31□□□□□ -1.88
CCDC39-206ENST00000489868 GLIPR2Q9H4G4 154 aa3.31□□□□□ -1.88
CCDC39-206ENST00000489868 RPAP3Q9H6T3 665 aaPredicted RBP3.31□□□□□ -1.88
CCDC39-206ENST00000489868 GMPPBQ9Y5P6 360 aa3.31□□□□□ -1.88
CCDC39-206ENST00000489868 PARD3Q8TEW0 1356 aa3.3□□□□□ -1.88
CCDC39-206ENST00000489868 UBE4BO95155 1302 aa3.3□□□□□ -1.88
CCDC39-206ENST00000489868 TRIM64A6NGJ6 449 aa3.3□□□□□ -1.88
CCDC39-206ENST00000489868 TRIM64BA6NI03 449 aa3.3□□□□□ -1.88
CCDC39-206ENST00000489868 WASHC1A8K0Z3 465 aa3.3□□□□□ -1.88
CCDC39-206ENST00000489868 WASH3PC4AMC7 463 aa3.3□□□□□ -1.88
CCDC39-206ENST00000489868 C19orf81C9J6K1 198 aa3.3□□□□□ -1.88
CCDC39-206ENST00000489868 EFNA2O43921 213 aa3.3□□□□□ -1.88
CCDC39-206ENST00000489868 TRIM3O75382 744 aaPredicted RBP3.3□□□□□ -1.88
CCDC39-206ENST00000489868 CHRNA1P02708 482 aa3.3□□□□□ -1.88
CCDC39-206ENST00000489868 ZNF32P17041 273 aa3.3□□□□□ -1.88
CCDC39-206ENST00000489868 AANATQ16613 207 aa3.3□□□□□ -1.88
CCDC39-206ENST00000489868 LRRC36Q1X8D7 754 aa3.3□□□□□ -1.88
CCDC39-206ENST00000489868 ZNF630Q2M218 657 aaPredicted RBP3.3□□□□□ -1.88
CCDC39-206ENST00000489868 PLBD1Q6P4A8 553 aa3.3□□□□□ -1.88
CCDC39-206ENST00000489868 WASH2PQ6VEQ5 465 aa3.3□□□□□ -1.88
CCDC39-206ENST00000489868 ZNF589Q86UQ0 364 aaPredicted RBP3.3□□□□□ -1.88
CCDC39-206ENST00000489868 VPS36Q86VN1 386 aa3.3□□□□□ -1.88
CCDC39-206ENST00000489868 ZNF433Q8N7K0 673 aaPredicted RBP3.3□□□□□ -1.88
CCDC39-206ENST00000489868 M1APQ8TC57 530 aa3.3□□□□□ -1.88
CCDC39-206ENST00000489868 NICN1Q9BSH3 213 aa3.3□□□□□ -1.88
CCDC39-206ENST00000489868 LCE3DQ9BYE3 92 aa3.3□□□□□ -1.88
CCDC39-206ENST00000489868 POLR3FQ9H1D9 316 aaPredicted RBP3.3□□□□□ -1.88
CCDC39-206ENST00000489868 COG4Q9H9E3 785 aa3.3□□□□□ -1.88
CCDC39-206ENST00000489868 ROPN1Q9HAT0 212 aaPredicted RBP3.3□□□□□ -1.88
CCDC39-206ENST00000489868 RBM28Q9NW13 759 aaKnown RBP3.3□□□□□ -1.88
CCDC39-206ENST00000489868 PAK1IP1Q9NWT1 392 aaPredicted RBP3.3□□□□□ -1.88
CCDC39-206ENST00000489868 MARCH5Q9NX47 278 aa3.3□□□□□ -1.88
CCDC39-206ENST00000489868 EIF3LQ9Y262 564 aaKnown RBP3.3□□□□□ -1.88
CCDC39-206ENST00000489868 NOTCH2Q04721 2471 aa3.29□□□□□ -1.88
CCDC39-206ENST00000489868 ABCC4O15439 1325 aa3.29□□□□□ -1.88
CCDC39-206ENST00000489868 TBL1XO60907 577 aa3.29□□□□□ -1.88
CCDC39-206ENST00000489868 MT-ATP6P00846 226 aa3.29□□□□□ -1.88
CCDC39-206ENST00000489868 TGFAP01135 160 aa3.29□□□□□ -1.88
CCDC39-206ENST00000489868 MT-ND3P03897 115 aa3.29□□□□□ -1.88
CCDC39-206ENST00000489868 HPNP05981 417 aa3.29□□□□□ -1.88
CCDC39-206ENST00000489868 ANXA3P12429 323 aa3.29□□□□□ -1.88
CCDC39-206ENST00000489868 FUT1P19526 365 aa3.29□□□□□ -1.88
CCDC39-206ENST00000489868 STARD6P59095 220 aa3.29□□□□□ -1.88
CCDC39-206ENST00000489868 MECOMQ03112 1051 aa3.29□□□□□ -1.88
CCDC39-206ENST00000489868 DAZ2Q13117 558 aaKnown RBP3.29□□□□□ -1.88
CCDC39-206ENST00000489868 GAMTQ14353 236 aa3.29□□□□□ -1.88
CCDC39-206ENST00000489868 DCST2Q5T1A1 773 aa3.29□□□□□ -1.88
CCDC39-206ENST00000489868 Q6P435 159 aa3.29□□□□□ -1.88
CCDC39-206ENST00000489868 EFCAB13Q8IY85 973 aa3.29□□□□□ -1.88
CCDC39-206ENST00000489868 MKXQ8IYA7 352 aa3.29□□□□□ -1.88
CCDC39-206ENST00000489868 CCDC71LQ8N9Z2 235 aa3.29□□□□□ -1.88
CCDC39-206ENST00000489868 TRUB1Q8WWH5 349 aaKnown RBP3.29□□□□□ -1.88
CCDC39-206ENST00000489868 FGGYQ96C11 551 aa3.29□□□□□ -1.88
CCDC39-206ENST00000489868 TXN2Q99757 166 aa3.29□□□□□ -1.88
CCDC39-206ENST00000489868 FANCFQ9NPI8 374 aa3.29□□□□□ -1.88
CCDC39-206ENST00000489868 DAZ3Q9NR90 486 aaKnown RBP3.29□□□□□ -1.88
CCDC39-206ENST00000489868 YAE1D1Q9NRH1 226 aa3.29□□□□□ -1.88
CCDC39-206ENST00000489868 XPO7Q9UIA9 1087 aaKnown RBP3.29□□□□□ -1.88
CCDC39-206ENST00000489868 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.29□□□□□ -1.88
CCDC39-206ENST00000489868 IGHV1OR15-1A0A075B7D0 117 aa3.28□□□□□ -1.88
CCDC39-206ENST00000489868 ZNF705EA8MWA4 302 aaPredicted RBP3.28□□□□□ -1.88
CCDC39-206ENST00000489868 IGHV3-48P01763 117 aa3.28□□□□□ -1.88
CCDC39-206ENST00000489868 ASNSP08243 561 aa3.28□□□□□ -1.88
CCDC39-206ENST00000489868 BCKDHAP12694 445 aa3.28□□□□□ -1.88
CCDC39-206ENST00000489868 ETS1P14921 441 aa3.28□□□□□ -1.88
CCDC39-206ENST00000489868 CYLC1P35663 651 aaPredicted RBP3.28□□□□□ -1.88
CCDC39-206ENST00000489868 DHPSP49366 369 aaPredicted RBP3.28□□□□□ -1.88
CCDC39-206ENST00000489868 WASHC5Q12768 1159 aa3.28□□□□□ -1.88
CCDC39-206ENST00000489868 ORC2Q13416 577 aaPredicted RBP3.28□□□□□ -1.88
CCDC39-206ENST00000489868 LANCL3Q6ZV70 420 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms