RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 GASTP01350 101 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 EIF4EP06730 217 aaKnown RBP4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 SRPRAP08240 638 aaKnown RBP4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 STAG3L1P0CL83 205 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 CXCL8P10145 99 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 ZNF44P15621 663 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 RPA2P15927 270 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 ABOP16442 354 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 RCC1P18754 421 aaPredicted RBP4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 ANXA7P20073 488 aaKnown RBP4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 PPIBP23284 216 aaKnown RBP4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 ITGA3P26006 1051 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 MPGP29372 298 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 SDHAP31040 664 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 CASP6P55212 293 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 DLX5P56178 289 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 RPS14P62263 151 aaKnown RBP4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 UBE2IP63279 158 aaKnown RBP4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 PITX1P78337 314 aaPredicted RBP4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 ACVR1Q04771 509 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 TCP10Q12799 353 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 GAS6Q14393 721 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 PPA1Q15181 289 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 TARBP2Q15633 366 aaKnown RBP4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 ELFN2Q5R3F8 820 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 IDNKQ5T6J7 187 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 LCE3BQ5TA77 95 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 PRAMEF18Q5VWM3 479 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 AFMIDQ63HM1 303 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 OR5M10Q6IEU7 315 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 TCEAL6Q6IPX3 200 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 BAIAP2L2Q6UXY1 529 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 CEACAM20Q6UY09 585 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 GLDNQ6ZMI3 551 aaPredicted RBP4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 TMPRSS11FQ6ZWK6 438 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 GOLGA7Q7Z5G4 137 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 DCUN1D3Q8IWE4 304 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 C7orf31Q8N865 590 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 SAMD12Q8N8I0 201 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 PNPLA1Q8N8W4 532 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 RELL2Q8NC24 303 aaPredicted RBP4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 OR10H5Q8NGA6 315 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 OR9Q2Q8NGE9 314 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 SPPL2AQ8TCT8 520 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 ACER1Q8TDN7 264 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 ASB13Q8WXK3 278 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 NELL1Q92832 810 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 PHYHIPLQ96FC7 376 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 SCLYQ96I15 445 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 ZDHHC15Q96MV8 337 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 FAIM2Q9BWQ8 316 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 SEC11CQ9BY50 192 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 WNT10AQ9GZT5 417 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 COA1Q9GZY4 146 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 TOLLIPQ9H0E2 274 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 C20orf85Q9H1P6 137 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 SLC25A51Q9H1U9 297 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 ATXN3LQ9H3M9 355 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 FZD8Q9H461 694 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 XKR8Q9H6D3 395 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 ZNF302Q9NR11 478 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 SMCO4Q9NRQ5 59 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 DUSP22Q9NRW4 184 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 PIGVQ9NUD9 493 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 RBM22Q9NW64 420 aaKnown RBP eCLIP4.46□□□□□ -1.691e-6■■■■■ 28.1
SNRNP40-206ENST00000489853 NUDT4Q9NZJ9 180 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 COX16Q9P0S2 106 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 DHCR7Q9UBM7 475 aaKnown RBP4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 ZNF70Q9UC06 446 aaPredicted RBP4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 LAMP5Q9UJQ1 280 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 CCNL1Q9UK58 526 aaPredicted RBP4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 CORO2BQ9UQ03 480 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 TNFSF13BQ9Y275 285 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 DLGAP4Q9Y2H0 992 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 EXOSC1Q9Y3B2 195 aaKnown RBP4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 DOCK5Q9H7D0 1870 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 LOC100289279A0A1B0GTE1 492 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 ABHD14A-ACY1A0A1B0GW23 586 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 OR14I1A6ND48 311 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 LRIT2A6NDA9 550 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 NPEPPSL1A6NEC2 478 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 TMEM200CA6NKL6 621 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 ALG1L2C9J202 215 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 LRRN3E7EW58 273 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 NPIPB9F8W1W9 429 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 AP4M1O00189 453 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 GABRPO00591 440 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 CTDSPLO15194 276 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 CREBL2O60519 120 aaPredicted RBP4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 UBXN7O94888 489 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 SPDEFO95238 335 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 MOCS2O96007 188 aaPredicted RBP4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 ADAP00813 363 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 IGF2P01344 180 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 MT-ND4P03905 459 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 ANKRD34CP0C6C1 535 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 SLC2A1P11166 492 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 ABCD3P28288 659 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 PCGF2P35227 344 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 RAB5CP51148 216 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms