RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 TNFAIP8L3Q5GJ75 292 aa12.65□□□□□ -0.38
VTI1A-206ENST00000489142 P4HA3Q7Z4N8 544 aa12.65□□□□□ -0.38
VTI1A-206ENST00000489142 RIMKLAQ8IXN7 391 aa12.65□□□□□ -0.38
VTI1A-206ENST00000489142 CLECL1Q8IZS7 167 aa12.65□□□□□ -0.38
VTI1A-206ENST00000489142 LINC01560Q8TB33 94 aa12.65□□□□□ -0.38
VTI1A-206ENST00000489142 FAM110BQ8TC76 370 aa12.65□□□□□ -0.38
VTI1A-206ENST00000489142 OR5P2Q8WZ92 322 aa12.65□□□□□ -0.38
VTI1A-206ENST00000489142 FIG4Q92562 907 aa12.65□□□□□ -0.38
VTI1A-206ENST00000489142 WNT2BQ93097 391 aa12.65□□□□□ -0.38
VTI1A-206ENST00000489142 ZNF845Q96IR2 970 aaPredicted RBP12.65□□□□□ -0.38
VTI1A-206ENST00000489142 DUSP26Q9BV47 211 aa12.65□□□□□ -0.38
VTI1A-206ENST00000489142 PINK1Q9BXM7 581 aa12.65□□□□□ -0.38
VTI1A-206ENST00000489142 AKTIPQ9H8T0 292 aa12.65□□□□□ -0.38
VTI1A-206ENST00000489142 SSU72Q9NP77 194 aaKnown RBP12.65□□□□□ -0.38
VTI1A-206ENST00000489142 ATAD3AQ9NVI7 634 aa12.65□□□□□ -0.38
VTI1A-206ENST00000489142 PNPOQ9NVS9 261 aa12.65□□□□□ -0.38
VTI1A-206ENST00000489142 NOP53Q9NZM5 478 aaKnown RBP12.65□□□□□ -0.38
VTI1A-206ENST00000489142 TEP1Q99973 2627 aaKnown RBP12.65□□□□□ -0.38
VTI1A-206ENST00000489142 IGLV3-32A0A0A0MS00 114 aa12.64□□□□□ -0.39
VTI1A-206ENST00000489142 SLC22A20A6NK97 555 aa12.64□□□□□ -0.39
VTI1A-206ENST00000489142 ALG1L2C9J202 215 aa12.64□□□□□ -0.39
VTI1A-206ENST00000489142 HCRTR2O43614 444 aa12.64□□□□□ -0.39
VTI1A-206ENST00000489142 PEPDP12955 493 aa12.64□□□□□ -0.39
VTI1A-206ENST00000489142 DDX5P17844 614 aaKnown RBP12.64□□□□□ -0.39
VTI1A-206ENST00000489142 PRPS1L1P21108 318 aa12.64□□□□□ -0.39
VTI1A-206ENST00000489142 TBXA2RP21731 343 aa12.64□□□□□ -0.39
VTI1A-206ENST00000489142 CPA2P48052 419 aa12.64□□□□□ -0.39
VTI1A-206ENST00000489142 CASP9P55211 416 aa12.64□□□□□ -0.39
VTI1A-206ENST00000489142 EMX2Q04743 252 aa12.64□□□□□ -0.39
VTI1A-206ENST00000489142 C17orf67Q0P5P2 114 aa12.64□□□□□ -0.39
VTI1A-206ENST00000489142 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.64□□□□□ -0.39
VTI1A-206ENST00000489142 EXOSC6Q5RKV6 272 aaKnown RBP12.64□□□□□ -0.39
VTI1A-206ENST00000489142 OR4F3Q6IEY1 312 aa12.64□□□□□ -0.39
VTI1A-206ENST00000489142 PPP4R4Q6NUP7 873 aa12.64□□□□□ -0.39
VTI1A-206ENST00000489142 CHMP1BQ7LBR1 199 aa12.64□□□□□ -0.39
VTI1A-206ENST00000489142 MEIOBQ8N635 442 aa12.64□□□□□ -0.39
VTI1A-206ENST00000489142 CNEP1R1Q8N9A8 125 aa12.64□□□□□ -0.39
VTI1A-206ENST00000489142 OR5D16Q8NGK9 328 aa12.64□□□□□ -0.39
VTI1A-206ENST00000489142 MGARPQ8TDB4 240 aa12.64□□□□□ -0.39
VTI1A-206ENST00000489142 COQ8BQ96D53 544 aa12.64□□□□□ -0.39
VTI1A-206ENST00000489142 LRRC46Q96FV0 321 aa12.64□□□□□ -0.39
VTI1A-206ENST00000489142 UCN2Q96RP3 112 aa12.64□□□□□ -0.39
VTI1A-206ENST00000489142 PIGQQ9BRB3 760 aa12.64□□□□□ -0.39
VTI1A-206ENST00000489142 SFXN3Q9BWM7 321 aa12.64□□□□□ -0.39
VTI1A-206ENST00000489142 RBM24Q9BX46 236 aaKnown RBP12.64□□□□□ -0.39
VTI1A-206ENST00000489142 BTBD2Q9BX70 525 aa12.64□□□□□ -0.39
VTI1A-206ENST00000489142 POLDIP3Q9BY77 421 aaKnown RBP12.64□□□□□ -0.39
VTI1A-206ENST00000489142 NUF2Q9BZD4 464 aa12.64□□□□□ -0.39
VTI1A-206ENST00000489142 LIME1Q9H400 295 aa12.64□□□□□ -0.39
VTI1A-206ENST00000489142 GPATCH2Q9NW75 528 aa12.64□□□□□ -0.39
VTI1A-206ENST00000489142 DNAJB12Q9NXW2 375 aaKnown RBP12.64□□□□□ -0.39
VTI1A-206ENST00000489142 GALNT8Q9NY28 637 aa12.64□□□□□ -0.39
VTI1A-206ENST00000489142 JKAMPQ9P055 326 aa12.64□□□□□ -0.39
VTI1A-206ENST00000489142 RAP2CQ9Y3L5 183 aa12.64□□□□□ -0.39
VTI1A-206ENST00000489142 SPG11Q96JI7 2443 aa12.64□□□□□ -0.39
VTI1A-206ENST00000489142 AKAP6Q13023 2319 aa12.63□□□□□ -0.39
VTI1A-206ENST00000489142 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.63□□□□□ -0.39
VTI1A-206ENST00000489142 A0A1W2PNV4 684 aa12.63□□□□□ -0.39
VTI1A-206ENST00000489142 TUBAL3A6NHL2 446 aa12.63□□□□□ -0.39
VTI1A-206ENST00000489142 SCDO00767 359 aa12.63□□□□□ -0.39
VTI1A-206ENST00000489142 OIP5O43482 229 aa12.63□□□□□ -0.39
VTI1A-206ENST00000489142 CTAG2O75638 210 aa12.63□□□□□ -0.39
VTI1A-206ENST00000489142 TNFSF13O75888 250 aa12.63□□□□□ -0.39
VTI1A-206ENST00000489142 SMNDC1O75940 238 aaKnown RBP eCLIP12.63□□□□□ -0.39
VTI1A-206ENST00000489142 IL18BPO95998 194 aa12.63□□□□□ -0.39
VTI1A-206ENST00000489142 MYZAPP0CAP1 466 aa12.63□□□□□ -0.39
VTI1A-206ENST00000489142 HPGDP15428 266 aa12.63□□□□□ -0.39
VTI1A-206ENST00000489142 CPOXP36551 454 aa12.63□□□□□ -0.39
VTI1A-206ENST00000489142 RPL14P50914 215 aaKnown RBP12.63□□□□□ -0.39
VTI1A-206ENST00000489142 NME5P56597 212 aa12.63□□□□□ -0.39
VTI1A-206ENST00000489142 CLDN8P56748 225 aa12.63□□□□□ -0.39
VTI1A-206ENST00000489142 HBA1P69905 142 aa12.63□□□□□ -0.39
VTI1A-206ENST00000489142 SIRPAP78324 504 aa12.63□□□□□ -0.39
VTI1A-206ENST00000489142 BST1Q10588 318 aa12.63□□□□□ -0.39
VTI1A-206ENST00000489142 STX3Q13277 289 aa12.63□□□□□ -0.39
VTI1A-206ENST00000489142 PON3Q15166 354 aa12.63□□□□□ -0.39
VTI1A-206ENST00000489142 BCL2A1Q16548 175 aa12.63□□□□□ -0.39
VTI1A-206ENST00000489142 NDUFAF6Q330K2 333 aa12.63□□□□□ -0.39
VTI1A-206ENST00000489142 LSM12Q3MHD2 195 aaKnown RBP12.63□□□□□ -0.39
VTI1A-206ENST00000489142 DCST2Q5T1A1 773 aa12.63□□□□□ -0.39
VTI1A-206ENST00000489142 CDC73Q6P1J9 531 aa12.63□□□□□ -0.39
VTI1A-206ENST00000489142 VWA1Q6PCB0 445 aa12.63□□□□□ -0.39
VTI1A-206ENST00000489142 ZCCHC12Q6PEW1 402 aa12.63□□□□□ -0.39
VTI1A-206ENST00000489142 OLIG3Q7RTU3 272 aa12.63□□□□□ -0.39
VTI1A-206ENST00000489142 ANKRD46Q86W74 232 aa12.63□□□□□ -0.39
VTI1A-206ENST00000489142 HOMEZQ8IX15 550 aa12.63□□□□□ -0.39
VTI1A-206ENST00000489142 OR56A1Q8NGH5 318 aa12.63□□□□□ -0.39
VTI1A-206ENST00000489142 FNDC9Q8TBE3 224 aa12.63□□□□□ -0.39
VTI1A-206ENST00000489142 PRPF18Q99633 342 aaKnown RBP12.63□□□□□ -0.39
VTI1A-206ENST00000489142 ACTRT3Q9BYD9 372 aa12.63□□□□□ -0.39
VTI1A-206ENST00000489142 BHLHE41Q9C0J9 482 aaPredicted RBP12.63□□□□□ -0.39
VTI1A-206ENST00000489142 PIGUQ9H490 435 aa12.63□□□□□ -0.39
VTI1A-206ENST00000489142 TMEM185BQ9H7F4 350 aa12.63□□□□□ -0.39
VTI1A-206ENST00000489142 SLC24A3Q9HC58 644 aa12.63□□□□□ -0.39
VTI1A-206ENST00000489142 UBQLN4Q9NRR5 601 aa12.63□□□□□ -0.39
VTI1A-206ENST00000489142 A6NNC1 897 aa12.62□□□□□ -0.39
VTI1A-206ENST00000489142 NGFRP08138 427 aa12.62□□□□□ -0.39
VTI1A-206ENST00000489142 WDR4P57081 412 aaKnown RBP12.62□□□□□ -0.39
VTI1A-206ENST00000489142 MAD2L1Q13257 205 aaPredicted RBP12.62□□□□□ -0.39
VTI1A-206ENST00000489142 TMEM44Q2T9K0 475 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms