RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 POMZP3Q6PJE2 187 aa14.44□□□□□ -0.1
CTDSP1-209ENST00000488627 NAXEQ8NCW5 288 aa14.44□□□□□ -0.1
CTDSP1-209ENST00000488627 CHDHQ8NE62 594 aaPredicted RBP14.44□□□□□ -0.1
CTDSP1-209ENST00000488627 VPS37AQ8NEZ2 397 aa14.44□□□□□ -0.1
CTDSP1-209ENST00000488627 TNIP2Q8NFZ5 429 aa14.44□□□□□ -0.1
CTDSP1-209ENST00000488627 LRRC8CQ8TDW0 803 aa14.44□□□□□ -0.1
CTDSP1-209ENST00000488627 CHMP6Q96FZ7 201 aa14.44□□□□□ -0.1
CTDSP1-209ENST00000488627 MARK4Q96L34 752 aa14.44□□□□□ -0.1
CTDSP1-209ENST00000488627 SFXN2Q96NB2 322 aa14.44□□□□□ -0.1
CTDSP1-209ENST00000488627 SDF2Q99470 211 aa14.44□□□□□ -0.1
CTDSP1-209ENST00000488627 TREX2Q9BQ50 279 aaPredicted RBP14.44□□□□□ -0.1
CTDSP1-209ENST00000488627 KLHDC3Q9BQ90 382 aa14.44□□□□□ -0.1
CTDSP1-209ENST00000488627 TUBA1CQ9BQE3 449 aa14.44□□□□□ -0.1
CTDSP1-209ENST00000488627 ENKD1Q9H0I2 346 aa14.44□□□□□ -0.1
CTDSP1-209ENST00000488627 CALHM2Q9HA72 323 aa14.44□□□□□ -0.1
CTDSP1-209ENST00000488627 SDR39U1Q9NRG7 319 aaPredicted RBP14.44□□□□□ -0.1
CTDSP1-209ENST00000488627 PCDHGB4Q9UN71 923 aa14.44□□□□□ -0.1
CTDSP1-209ENST00000488627 FREM3P0C091 2139 aa14.44□□□□□ -0.1
CTDSP1-209ENST00000488627 NAV2Q8IVL1 2488 aa14.43□□□□□ -0.1
CTDSP1-209ENST00000488627 NUP214P35658 2090 aaPredicted RBP14.43□□□□□ -0.1
CTDSP1-209ENST00000488627 CELSR2Q9HCU4 2923 aa14.43□□□□□ -0.1
CTDSP1-209ENST00000488627 MAST4O15021 2626 aa14.43□□□□□ -0.1
CTDSP1-209ENST00000488627 A0A1W2PQD3 144 aa14.43□□□□□ -0.1
CTDSP1-209ENST00000488627 NKX2-6A6NCS4 301 aa14.43□□□□□ -0.1
CTDSP1-209ENST00000488627 NDUFB5O43674 189 aa14.43□□□□□ -0.1
CTDSP1-209ENST00000488627 PGRP06401 933 aa14.43□□□□□ -0.1
CTDSP1-209ENST00000488627 IDO1P14902 403 aa14.43□□□□□ -0.1
CTDSP1-209ENST00000488627 IGFBP2P18065 325 aa14.43□□□□□ -0.1
CTDSP1-209ENST00000488627 HK1P19367 917 aa14.43□□□□□ -0.1
CTDSP1-209ENST00000488627 UQCRC2P22695 453 aa14.43□□□□□ -0.1
CTDSP1-209ENST00000488627 TCEA1P23193 301 aaKnown RBP14.43□□□□□ -0.1
CTDSP1-209ENST00000488627 CLDN15P56746 228 aa14.43□□□□□ -0.1
CTDSP1-209ENST00000488627 PPP2R2AP63151 447 aa14.43□□□□□ -0.1
CTDSP1-209ENST00000488627 GANABQ14697 944 aaKnown RBP14.43□□□□□ -0.1
CTDSP1-209ENST00000488627 BCL2A1Q16548 175 aa14.43□□□□□ -0.1
CTDSP1-209ENST00000488627 GLYR1Q49A26 553 aaPredicted RBP14.43□□□□□ -0.1
CTDSP1-209ENST00000488627 KLHL26Q53HC5 615 aa14.43□□□□□ -0.1
CTDSP1-209ENST00000488627 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.43□□□□□ -0.1
CTDSP1-209ENST00000488627 AP1ARQ63HQ0 302 aa14.43□□□□□ -0.1
CTDSP1-209ENST00000488627 AAGABQ6PD74 315 aa14.43□□□□□ -0.1
CTDSP1-209ENST00000488627 ENPP6Q6UWR7 440 aa14.43□□□□□ -0.1
CTDSP1-209ENST00000488627 ARSKQ6UWY0 536 aa14.43□□□□□ -0.1
CTDSP1-209ENST00000488627 LACC1Q8IV20 430 aa14.43□□□□□ -0.1
CTDSP1-209ENST00000488627 GATSQ8NAP1 163 aa14.43□□□□□ -0.1
CTDSP1-209ENST00000488627 MARVELD3Q96A59 401 aa14.43□□□□□ -0.1
CTDSP1-209ENST00000488627 DTNBP1Q96EV8 351 aa14.43□□□□□ -0.1
CTDSP1-209ENST00000488627 UCN2Q96RP3 112 aa14.43□□□□□ -0.1
CTDSP1-209ENST00000488627 INPP5KQ9BT40 448 aa14.43□□□□□ -0.1
CTDSP1-209ENST00000488627 PTGES2Q9H7Z7 377 aa14.43□□□□□ -0.1
CTDSP1-209ENST00000488627 NPDC1Q9NQX5 325 aaPredicted RBP14.43□□□□□ -0.1
CTDSP1-209ENST00000488627 NPIPA5A0A0B4J1W7 369 aa14.42□□□□□ -0.1
CTDSP1-209ENST00000488627 OR2M5A3KFT3 312 aa14.42□□□□□ -0.1
CTDSP1-209ENST00000488627 MBD3L4A6NDZ8 208 aaPredicted RBP14.42□□□□□ -0.1
CTDSP1-209ENST00000488627 MBD3L3A6NE82 208 aaPredicted RBP14.42□□□□□ -0.1
CTDSP1-209ENST00000488627 MBD3L5A6NJ08 208 aaPredicted RBP14.42□□□□□ -0.1
CTDSP1-209ENST00000488627 DUXAA6NLW8 204 aa14.42□□□□□ -0.1
CTDSP1-209ENST00000488627 FAM90A27PA6NNH2 459 aa14.42□□□□□ -0.1
CTDSP1-209ENST00000488627 FAM47E-STBD1D6RA91 191 aa14.42□□□□□ -0.1
CTDSP1-209ENST00000488627 NPIPA7E9PJI5 369 aa14.42□□□□□ -0.1
CTDSP1-209ENST00000488627 UBDO15205 165 aa14.42□□□□□ -0.1
CTDSP1-209ENST00000488627 DIAPH2O60879 1101 aa14.42□□□□□ -0.1
CTDSP1-209ENST00000488627 TGDSO95455 350 aa14.42□□□□□ -0.1
CTDSP1-209ENST00000488627 NPIPA8P0DM63 369 aa14.42□□□□□ -0.1
CTDSP1-209ENST00000488627 GCKP35557 465 aa14.42□□□□□ -0.1
CTDSP1-209ENST00000488627 CDKN2CP42773 168 aa14.42□□□□□ -0.1
CTDSP1-209ENST00000488627 IDH3AP50213 366 aa14.42□□□□□ -0.1
CTDSP1-209ENST00000488627 CASP9P55211 416 aa14.42□□□□□ -0.1
CTDSP1-209ENST00000488627 SRYQ05066 204 aa14.42□□□□□ -0.1
CTDSP1-209ENST00000488627 SF3B4Q15427 424 aaKnown RBP eCLIP14.42□□□□□ -0.19e-8■■□□□ 12.6
CTDSP1-209ENST00000488627 GSTA3Q16772 222 aa14.42□□□□□ -0.1
CTDSP1-209ENST00000488627 HEPHL1Q6MZM0 1159 aa14.42□□□□□ -0.1
CTDSP1-209ENST00000488627 GOLGA6L1Q8N7Z2 621 aa14.42□□□□□ -0.1
CTDSP1-209ENST00000488627 GLB1L3Q8NCI6 653 aaPredicted RBP14.42□□□□□ -0.1
CTDSP1-209ENST00000488627 OR5M1Q8NGP8 315 aa14.42□□□□□ -0.1
CTDSP1-209ENST00000488627 MBD3L2Q8NHZ7 208 aaPredicted RBP14.42□□□□□ -0.1
CTDSP1-209ENST00000488627 CKAP2Q8WWK9 683 aa14.42□□□□□ -0.1
CTDSP1-209ENST00000488627 NEURL3Q96EH8 262 aa14.42□□□□□ -0.1
CTDSP1-209ENST00000488627 OR52E6Q96RD3 313 aa14.42□□□□□ -0.1
CTDSP1-209ENST00000488627 TRIB1Q96RU8 372 aa14.42□□□□□ -0.1
CTDSP1-209ENST00000488627 SPOCK3Q9BQ16 436 aa14.42□□□□□ -0.1
CTDSP1-209ENST00000488627 HOXD1Q9GZZ0 328 aa14.42□□□□□ -0.1
CTDSP1-209ENST00000488627 OR51I1Q9H343 314 aa14.42□□□□□ -0.1
CTDSP1-209ENST00000488627 KCNJ16Q9NPI9 418 aa14.42□□□□□ -0.1
CTDSP1-209ENST00000488627 INTS9Q9NV88 658 aaKnown RBP14.42□□□□□ -0.1
CTDSP1-209ENST00000488627 ZNF446Q9NWS9 450 aa14.42□□□□□ -0.1
CTDSP1-209ENST00000488627 ZIM2Q9NZV7 527 aa14.42□□□□□ -0.1
CTDSP1-209ENST00000488627 ZNF337Q9Y3M9 751 aa14.42□□□□□ -0.1
CTDSP1-209ENST00000488627 CRYBG3Q68DQ2 2970 aa14.42□□□□□ -0.1
CTDSP1-209ENST00000488627 HSPB2A8KAH6 182 aa14.41□□□□□ -0.1
CTDSP1-209ENST00000488627 SCDO00767 359 aa14.41□□□□□ -0.1
CTDSP1-209ENST00000488627 OIP5O43482 229 aa14.41□□□□□ -0.1
CTDSP1-209ENST00000488627 FCMRO60667 390 aa14.41□□□□□ -0.1
CTDSP1-209ENST00000488627 SLC22A3O75751 556 aa14.41□□□□□ -0.1
CTDSP1-209ENST00000488627 ATP6V1C1P21283 382 aa14.41□□□□□ -0.1
CTDSP1-209ENST00000488627 MSX1P28360 303 aa14.41□□□□□ -0.1
CTDSP1-209ENST00000488627 ZNF136P52737 540 aa14.41□□□□□ -0.1
CTDSP1-209ENST00000488627 SUCLG1P53597 346 aaKnown RBP14.41□□□□□ -0.1
CTDSP1-209ENST00000488627 ATP12AP54707 1039 aa14.41□□□□□ -0.1
CTDSP1-209ENST00000488627 HSPB2Q16082 182 aa14.41□□□□□ -0.1
CTDSP1-209ENST00000488627 ARHGAP11BQ3KRB8 267 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms