RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 BTLAQ7Z6A9 289 aa17.4■□□□□ 0.38
CD55-209ENST00000488171 GGNQ86UU5 652 aa17.4■□□□□ 0.38
CD55-209ENST00000488171 METTL25Q8N6Q8 603 aa17.4■□□□□ 0.38
CD55-209ENST00000488171 CNEP1R1Q8N9A8 125 aa17.4■□□□□ 0.38
CD55-209ENST00000488171 GATSQ8NAP1 163 aa17.4■□□□□ 0.38
CD55-209ENST00000488171 FNDC9Q8TBE3 224 aa17.4■□□□□ 0.38
CD55-209ENST00000488171 NUDT8Q8WV74 236 aa17.4■□□□□ 0.38
CD55-209ENST00000488171 SMPDL3BQ92485 455 aa17.4■□□□□ 0.38
CD55-209ENST00000488171 CAVIN3Q969G5 261 aa17.4■□□□□ 0.38
CD55-209ENST00000488171 NPAS1Q99742 590 aa17.4■□□□□ 0.38
CD55-209ENST00000488171 C1orf50Q9BV19 199 aa17.4■□□□□ 0.38
CD55-209ENST00000488171 PLEKHF2Q9H8W4 249 aa17.4■□□□□ 0.38
CD55-209ENST00000488171 RNF122Q9H9V4 155 aa17.4■□□□□ 0.38
CD55-209ENST00000488171 VDAC3Q9Y277 283 aa17.4■□□□□ 0.38
CD55-209ENST00000488171 ZNF175Q9Y473 711 aa17.4■□□□□ 0.38
CD55-209ENST00000488171 A0A1W2PRB8 838 aa17.39■□□□□ 0.37
CD55-209ENST00000488171 NDUFB5O43674 189 aa17.39■□□□□ 0.37
CD55-209ENST00000488171 SMNDC1O75940 238 aaKnown RBP eCLIP17.39■□□□□ 0.37
CD55-209ENST00000488171 HRGP04196 525 aa17.39■□□□□ 0.37
CD55-209ENST00000488171 HMGN2P05204 90 aaKnown RBP17.39■□□□□ 0.37
CD55-209ENST00000488171 CPOXP36551 454 aa17.39■□□□□ 0.37
CD55-209ENST00000488171 ETV4P43268 484 aa17.39■□□□□ 0.37
CD55-209ENST00000488171 PRIM2P49643 509 aa17.39■□□□□ 0.37
CD55-209ENST00000488171 OCRLQ01968 901 aa17.39■□□□□ 0.37
CD55-209ENST00000488171 FAM27E3Q08E93 113 aa17.39■□□□□ 0.37
CD55-209ENST00000488171 PON3Q15166 354 aa17.39■□□□□ 0.37
CD55-209ENST00000488171 GUSBP1Q15486 140 aa17.39■□□□□ 0.37
CD55-209ENST00000488171 ATP6AP1LQ52LC2 224 aa17.39■□□□□ 0.37
CD55-209ENST00000488171 CCNJQ5T5M9 372 aa17.39■□□□□ 0.37
CD55-209ENST00000488171 WDR93Q6P2C0 686 aa17.39■□□□□ 0.37
CD55-209ENST00000488171 COX18Q8N8Q8 333 aa17.39■□□□□ 0.37
CD55-209ENST00000488171 TMEM109Q9BVC6 243 aa17.39■□□□□ 0.37
CD55-209ENST00000488171 ZCCHC3Q9NUD5 404 aaKnown RBP17.39■□□□□ 0.37
CD55-209ENST00000488171 TESMINQ9Y4I5 508 aa17.39■□□□□ 0.37
CD55-209ENST00000488171 A0A1W2PPR1 153 aa17.38■□□□□ 0.37
CD55-209ENST00000488171 SKAP2O75563 359 aaPredicted RBP17.38■□□□□ 0.37
CD55-209ENST00000488171 CGAP01215 116 aa17.38■□□□□ 0.37
CD55-209ENST00000488171 ZNF17P17021 662 aa17.38■□□□□ 0.37
CD55-209ENST00000488171 DDX5P17844 614 aaKnown RBP17.38■□□□□ 0.37
CD55-209ENST00000488171 LCN1P31025 176 aa17.38■□□□□ 0.37
CD55-209ENST00000488171 RPL3P39023 403 aaKnown RBP17.38■□□□□ 0.37
CD55-209ENST00000488171 PCYT1AP49585 367 aa17.38■□□□□ 0.37
CD55-209ENST00000488171 LASP1Q14847 261 aaKnown RBP17.38■□□□□ 0.37
CD55-209ENST00000488171 IL23RQ5VWK5 629 aa17.38■□□□□ 0.37
CD55-209ENST00000488171 ZNF474Q6S9Z5 364 aaPredicted RBP17.38■□□□□ 0.37
CD55-209ENST00000488171 PSMA8Q8TAA3 256 aa17.38■□□□□ 0.37
CD55-209ENST00000488171 JADE3Q92613 823 aa17.38■□□□□ 0.37
CD55-209ENST00000488171 MBD6Q96DN6 1003 aa17.38■□□□□ 0.37
CD55-209ENST00000488171 PGM2Q96G03 612 aa17.38■□□□□ 0.37
CD55-209ENST00000488171 STACQ99469 402 aa17.38■□□□□ 0.37
CD55-209ENST00000488171 KLHDC3Q9BQ90 382 aa17.38■□□□□ 0.37
CD55-209ENST00000488171 TMUB1Q9BVT8 246 aa17.38■□□□□ 0.37
CD55-209ENST00000488171 BTBD2Q9BX70 525 aa17.38■□□□□ 0.37
CD55-209ENST00000488171 OPN3Q9H1Y3 402 aaPredicted RBP17.38■□□□□ 0.37
CD55-209ENST00000488171 UBQLN4Q9NRR5 601 aa17.38■□□□□ 0.37
CD55-209ENST00000488171 DUSP22Q9NRW4 184 aa17.38■□□□□ 0.37
CD55-209ENST00000488171 EDARQ9UNE0 448 aa17.38■□□□□ 0.37
CD55-209ENST00000488171 AKAP6Q13023 2319 aa17.38■□□□□ 0.37
CD55-209ENST00000488171 PRRC2AP48634 2157 aaKnown RBP17.37■□□□□ 0.37
CD55-209ENST00000488171 A0A087WZY1 265 aa17.37■□□□□ 0.37
CD55-209ENST00000488171 AQP8O94778 261 aa17.37■□□□□ 0.37
CD55-209ENST00000488171 ATE1O95260 518 aa17.37■□□□□ 0.37
CD55-209ENST00000488171 PSMA4P25789 261 aaKnown RBP17.37■□□□□ 0.37
CD55-209ENST00000488171 SERPINB4P48594 390 aa17.37■□□□□ 0.37
CD55-209ENST00000488171 RPS3AP61247 264 aaKnown RBP17.37■□□□□ 0.37
CD55-209ENST00000488171 SIRPAP78324 504 aa17.37■□□□□ 0.37
CD55-209ENST00000488171 POU6F2P78424 691 aaPredicted RBP17.37■□□□□ 0.37
CD55-209ENST00000488171 POU4F3Q15319 338 aa17.37■□□□□ 0.37
CD55-209ENST00000488171 CPTPQ5TA50 214 aa17.37■□□□□ 0.37
CD55-209ENST00000488171 RIMKLAQ8IXN7 391 aa17.37■□□□□ 0.37
CD55-209ENST00000488171 GTPBP8Q8N3Z3 284 aaPredicted RBP17.37■□□□□ 0.37
CD55-209ENST00000488171 KRTCAP2Q8N6L1 136 aa17.37■□□□□ 0.37
CD55-209ENST00000488171 FNDC5Q8NAU1 212 aa17.37■□□□□ 0.37
CD55-209ENST00000488171 OR5P2Q8WZ92 322 aa17.37■□□□□ 0.37
CD55-209ENST00000488171 CDS1Q92903 461 aa17.37■□□□□ 0.37
CD55-209ENST00000488171 COQ8BQ96D53 544 aa17.37■□□□□ 0.37
CD55-209ENST00000488171 ALPK1Q96QP1 1244 aa17.37■□□□□ 0.37
CD55-209ENST00000488171 PIGUQ9H490 435 aa17.37■□□□□ 0.37
CD55-209ENST00000488171 CXorf36Q9H7Y0 433 aa17.37■□□□□ 0.37
CD55-209ENST00000488171 HHATLQ9HCP6 504 aa17.37■□□□□ 0.37
CD55-209ENST00000488171 GIN1Q9NXP7 522 aa17.37■□□□□ 0.37
CD55-209ENST00000488171 NDRG3Q9UGV2 375 aa17.37■□□□□ 0.37
CD55-209ENST00000488171 SNX8Q9Y5X2 465 aa17.37■□□□□ 0.37
CD55-209ENST00000488171 A0A1W2PQD3 144 aa17.36■□□□□ 0.37
CD55-209ENST00000488171 C7orf72A4D263 438 aa17.36■□□□□ 0.37
CD55-209ENST00000488171 LYPLA1O75608 230 aaPredicted RBP17.36■□□□□ 0.37
CD55-209ENST00000488171 RAF1P04049 648 aa17.36■□□□□ 0.37
CD55-209ENST00000488171 CD79BP40259 229 aa17.36■□□□□ 0.37
CD55-209ENST00000488171 CCT3P49368 545 aaKnown RBP17.36■□□□□ 0.37
CD55-209ENST00000488171 CD226Q15762 336 aa17.36■□□□□ 0.37
CD55-209ENST00000488171 CTU2Q2VPK5 515 aaKnown RBP17.36■□□□□ 0.37
CD55-209ENST00000488171 PLPPR5Q32ZL2 321 aa17.36■□□□□ 0.37
CD55-209ENST00000488171 CDC73Q6P1J9 531 aa17.36■□□□□ 0.37
CD55-209ENST00000488171 CAMKMTQ7Z624 323 aa17.36■□□□□ 0.37
CD55-209ENST00000488171 TGIF2LYQ8IUE0 185 aa17.36■□□□□ 0.37
CD55-209ENST00000488171 PIP4P2Q8N4L2 257 aa17.36■□□□□ 0.37
CD55-209ENST00000488171 MREGQ8N565 214 aa17.36■□□□□ 0.37
CD55-209ENST00000488171 CHDHQ8NE62 594 aaPredicted RBP17.36■□□□□ 0.37
CD55-209ENST00000488171 ACTRT2Q8TDY3 377 aa17.36■□□□□ 0.37
CD55-209ENST00000488171 SH3YL1Q96HL8 342 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms