RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 CYP7B1O75881 506 aa8.71□□□□□ -1.01
SF3B1-211ENST00000487698 IL33O95760 270 aa8.71□□□□□ -1.01
SF3B1-211ENST00000487698 HEXBP07686 556 aa8.71□□□□□ -1.01
SF3B1-211ENST00000487698 POU2F1P14859 743 aa8.71□□□□□ -1.01
SF3B1-211ENST00000487698 ELK4P28324 431 aa8.71□□□□□ -1.01
SF3B1-211ENST00000487698 DCAF7P61962 342 aa8.71□□□□□ -1.01
SF3B1-211ENST00000487698 RPP38P78345 283 aaKnown RBP8.71□□□□□ -1.01
SF3B1-211ENST00000487698 ST3GAL3Q11203 375 aa8.71□□□□□ -1.01
SF3B1-211ENST00000487698 TRAM2Q15035 370 aa8.71□□□□□ -1.01
SF3B1-211ENST00000487698 DECR1Q16698 335 aa8.71□□□□□ -1.01
SF3B1-211ENST00000487698 FAAH2Q6GMR7 532 aa8.71□□□□□ -1.01
SF3B1-211ENST00000487698 CD300LDQ6UXZ3 194 aa8.71□□□□□ -1.01
SF3B1-211ENST00000487698 ZNF517Q6ZMY9 492 aaPredicted RBP8.71□□□□□ -1.01
SF3B1-211ENST00000487698 PLEKHM3Q6ZWE6 761 aa8.71□□□□□ -1.01
SF3B1-211ENST00000487698 SLCO6A1Q86UG4 719 aa8.71□□□□□ -1.01
SF3B1-211ENST00000487698 RANBP3LQ86VV4 465 aaPredicted RBP8.71□□□□□ -1.01
SF3B1-211ENST00000487698 CMIPQ8IY22 773 aa8.71□□□□□ -1.01
SF3B1-211ENST00000487698 C17orf47Q8NEP4 570 aa8.71□□□□□ -1.01
SF3B1-211ENST00000487698 NFAM1Q8NET5 270 aaPredicted RBP8.71□□□□□ -1.01
SF3B1-211ENST00000487698 TSPAN14Q8NG11 270 aa8.71□□□□□ -1.01
SF3B1-211ENST00000487698 HDAC2Q92769 488 aaKnown RBP8.71□□□□□ -1.01
SF3B1-211ENST00000487698 SLC35B4Q969S0 331 aa8.71□□□□□ -1.01
SF3B1-211ENST00000487698 GTPBP3Q969Y2 492 aaKnown RBP8.71□□□□□ -1.01
SF3B1-211ENST00000487698 SEMA4CQ9C0C4 833 aa8.71□□□□□ -1.01
SF3B1-211ENST00000487698 WWTR1Q9GZV5 400 aa8.71□□□□□ -1.01
SF3B1-211ENST00000487698 ING2Q9H160 280 aa8.71□□□□□ -1.01
SF3B1-211ENST00000487698 ARMC7Q9H6L4 198 aa8.71□□□□□ -1.01
SF3B1-211ENST00000487698 AKIRIN1Q9H9L7 192 aaPredicted RBP8.71□□□□□ -1.01
SF3B1-211ENST00000487698 DNAJB12Q9NXW2 375 aaKnown RBP8.71□□□□□ -1.01
SF3B1-211ENST00000487698 COPS7AQ9UBW8 275 aa8.71□□□□□ -1.01
SF3B1-211ENST00000487698 REV1Q9UBZ9 1251 aa8.71□□□□□ -1.01
SF3B1-211ENST00000487698 TESQ9UGI8 421 aaKnown RBP8.71□□□□□ -1.01
SF3B1-211ENST00000487698 ENOPH1Q9UHY7 261 aa8.71□□□□□ -1.01
SF3B1-211ENST00000487698 PCDHGA6Q9Y5G7 932 aa8.71□□□□□ -1.01
SF3B1-211ENST00000487698 GMPPBQ9Y5P6 360 aa8.71□□□□□ -1.01
SF3B1-211ENST00000487698 A0A087WUU8 490 aa8.71□□□□□ -1.02
SF3B1-211ENST00000487698 SAGE2PA6NJ88 616 aa8.71□□□□□ -1.02
SF3B1-211ENST00000487698 TO15178 435 aa8.71□□□□□ -1.02
SF3B1-211ENST00000487698 PRKNO60260 465 aaPredicted RBP8.71□□□□□ -1.02
SF3B1-211ENST00000487698 LYPD3O95274 346 aa8.71□□□□□ -1.02
SF3B1-211ENST00000487698 TFAP2AP05549 437 aa8.71□□□□□ -1.02
SF3B1-211ENST00000487698 GKN3PP0CG01 181 aa8.71□□□□□ -1.02
SF3B1-211ENST00000487698 GGT2P36268 569 aa8.71□□□□□ -1.02
SF3B1-211ENST00000487698 RNF144AP50876 292 aaPredicted RBP8.71□□□□□ -1.02
SF3B1-211ENST00000487698 UGT2B15P54855 530 aa8.71□□□□□ -1.02
SF3B1-211ENST00000487698 TPD52P55327 224 aaPredicted RBP8.71□□□□□ -1.02
SF3B1-211ENST00000487698 NUP107P57740 925 aa8.71□□□□□ -1.02
SF3B1-211ENST00000487698 ESRRGP62508 458 aa8.71□□□□□ -1.02
SF3B1-211ENST00000487698 LSM11P83369 360 aaKnown RBP eCLIP8.71□□□□□ -1.02
SF3B1-211ENST00000487698 SPEM2Q0P670 501 aa8.71□□□□□ -1.02
SF3B1-211ENST00000487698 FOXD4Q12950 439 aaPredicted RBP8.71□□□□□ -1.02
SF3B1-211ENST00000487698 ILKQ13418 452 aa8.71□□□□□ -1.02
SF3B1-211ENST00000487698 MEP1AQ16819 746 aa8.71□□□□□ -1.02
SF3B1-211ENST00000487698 ZSWIM7Q19AV6 140 aa8.71□□□□□ -1.02
SF3B1-211ENST00000487698 CDCP2Q5VXM1 449 aa8.71□□□□□ -1.02
SF3B1-211ENST00000487698 C1orf94Q6P1W5 598 aa8.71□□□□□ -1.02
SF3B1-211ENST00000487698 TMEM205Q6UW68 189 aa8.71□□□□□ -1.02
SF3B1-211ENST00000487698 FAM198BQ6UWH4 519 aa8.71□□□□□ -1.02
SF3B1-211ENST00000487698 Q6ZPB1 254 aaPredicted RBP8.71□□□□□ -1.02
SF3B1-211ENST00000487698 GDF7Q7Z4P5 450 aa8.71□□□□□ -1.02
SF3B1-211ENST00000487698 APCDD1LQ8NCL9 501 aa8.71□□□□□ -1.02
SF3B1-211ENST00000487698 TOR1AIP2Q8NFQ8 470 aa8.71□□□□□ -1.02
SF3B1-211ENST00000487698 OR4C3Q8NH37 302 aa8.71□□□□□ -1.02
SF3B1-211ENST00000487698 CNOT9Q92600 299 aaKnown RBP8.71□□□□□ -1.02
SF3B1-211ENST00000487698 SLC38A4Q969I6 547 aa8.71□□□□□ -1.02
SF3B1-211ENST00000487698 SLC41A3Q96GZ6 507 aa8.71□□□□□ -1.02
SF3B1-211ENST00000487698 APOL4Q9BPW4 351 aa8.71□□□□□ -1.02
SF3B1-211ENST00000487698 WDR77Q9BQA1 342 aaPredicted RBP8.71□□□□□ -1.02
SF3B1-211ENST00000487698 ZNF223Q9UK11 482 aaPredicted RBP8.71□□□□□ -1.02
SF3B1-211ENST00000487698 IGHV3-20A0A0C4DH32 117 aa8.7□□□□□ -1.02
SF3B1-211ENST00000487698 C2orf92A0A1B0GVN3 265 aa8.7□□□□□ -1.02
SF3B1-211ENST00000487698 TNFRSF10AO00220 468 aa8.7□□□□□ -1.02
SF3B1-211ENST00000487698 ADAM11O75078 769 aa8.7□□□□□ -1.02
SF3B1-211ENST00000487698 RFPL3O75679 317 aa8.7□□□□□ -1.02
SF3B1-211ENST00000487698 CLPTM1O96005 669 aa8.7□□□□□ -1.02
SF3B1-211ENST00000487698 TP53P04637 393 aaPredicted RBP8.7□□□□□ -1.02
SF3B1-211ENST00000487698 AGXTP21549 392 aa8.7□□□□□ -1.02
SF3B1-211ENST00000487698 MMP11P24347 488 aa8.7□□□□□ -1.02
SF3B1-211ENST00000487698 CRHBPP24387 322 aa8.7□□□□□ -1.02
SF3B1-211ENST00000487698 SLC5A2P31639 672 aa8.7□□□□□ -1.02
SF3B1-211ENST00000487698 IFNA8P32881 189 aa8.7□□□□□ -1.02
SF3B1-211ENST00000487698 GTF2A1P52655 376 aaPredicted RBP8.7□□□□□ -1.02
SF3B1-211ENST00000487698 EMP2P54851 167 aa8.7□□□□□ -1.02
SF3B1-211ENST00000487698 INSM1Q01101 510 aaPredicted RBP8.7□□□□□ -1.02
SF3B1-211ENST00000487698 MAD2L1BPQ15013 274 aaPredicted RBP8.7□□□□□ -1.02
SF3B1-211ENST00000487698 KLHL26Q53HC5 615 aa8.7□□□□□ -1.02
SF3B1-211ENST00000487698 RBM48Q5RL73 367 aaKnown RBP8.7□□□□□ -1.02
SF3B1-211ENST00000487698 C6orf141Q5SZD1 244 aa8.7□□□□□ -1.02
SF3B1-211ENST00000487698 FNDC7Q5VTL7 733 aa8.7□□□□□ -1.02
SF3B1-211ENST00000487698 ZER1Q7Z7L7 766 aa8.7□□□□□ -1.02
SF3B1-211ENST00000487698 NKAIN4Q8IVV8 208 aa8.7□□□□□ -1.02
SF3B1-211ENST00000487698 FAM71CQ8NEG0 241 aa8.7□□□□□ -1.02
SF3B1-211ENST00000487698 B3GNT7Q8NFL0 401 aa8.7□□□□□ -1.02
SF3B1-211ENST00000487698 ACOT11Q8WXI4 607 aaPredicted RBP8.7□□□□□ -1.02
SF3B1-211ENST00000487698 ZNF566Q969W8 418 aa8.7□□□□□ -1.02
SF3B1-211ENST00000487698 EFHD2Q96C19 240 aaPredicted RBP8.7□□□□□ -1.02
SF3B1-211ENST00000487698 GAL3ST4Q96RP7 486 aa8.7□□□□□ -1.02
SF3B1-211ENST00000487698 CMKLR1Q99788 373 aa8.7□□□□□ -1.02
SF3B1-211ENST00000487698 PRSS27Q9BQR3 290 aa8.7□□□□□ -1.02
SF3B1-211ENST00000487698 UCK2Q9BZX2 261 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms