RNA–Protein interactions for RNA: ENST00000487647.5

FGFR1-222, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,608 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-222ENST00000487647 LOXL2Q9Y4K0 774 aa13.6□□□□□ -0.23
FGFR1-222ENST00000487647 GMPPBQ9Y5P6 360 aa13.6□□□□□ -0.23
FGFR1-222ENST00000487647 ASCC3Q8N3C0 2202 aaKnown RBP13.6□□□□□ -0.23
FGFR1-222ENST00000487647 NUP210LQ5VU65 1888 aa13.59□□□□□ -0.23
FGFR1-222ENST00000487647 CENPVL1A0A0U1RR11 272 aa13.59□□□□□ -0.23
FGFR1-222ENST00000487647 TRIM64A6NGJ6 449 aa13.59□□□□□ -0.23
FGFR1-222ENST00000487647 AGRPO00253 132 aa13.59□□□□□ -0.23
FGFR1-222ENST00000487647 ENDOUP21128 410 aaKnown RBP13.59□□□□□ -0.23
FGFR1-222ENST00000487647 GSTM3P21266 225 aa13.59□□□□□ -0.23
FGFR1-222ENST00000487647 CLK3P49761 638 aaKnown RBP13.59□□□□□ -0.23
FGFR1-222ENST00000487647 UGT2B15P54855 530 aa13.59□□□□□ -0.23
FGFR1-222ENST00000487647 ISL1P61371 349 aa13.59□□□□□ -0.23
FGFR1-222ENST00000487647 RPP38P78345 283 aaKnown RBP13.59□□□□□ -0.23
FGFR1-222ENST00000487647 INSM1Q01101 510 aaPredicted RBP13.59□□□□□ -0.23
FGFR1-222ENST00000487647 TOP3AQ13472 1001 aaPredicted RBP13.59□□□□□ -0.23
FGFR1-222ENST00000487647 SEC23BQ15437 767 aa13.59□□□□□ -0.23
FGFR1-222ENST00000487647 ISXQ2M1V0 245 aa13.59□□□□□ -0.23
FGFR1-222ENST00000487647 PDZK1Q5T2W1 519 aa13.59□□□□□ -0.23
FGFR1-222ENST00000487647 C1orf94Q6P1W5 598 aa13.59□□□□□ -0.23
FGFR1-222ENST00000487647 LANCL3Q6ZV70 420 aa13.59□□□□□ -0.23
FGFR1-222ENST00000487647 C9orf40Q8IXQ3 194 aa13.59□□□□□ -0.23
FGFR1-222ENST00000487647 ZNF440Q8IYI8 595 aa13.59□□□□□ -0.23
FGFR1-222ENST00000487647 ZNF786Q8N393 782 aa13.59□□□□□ -0.23
FGFR1-222ENST00000487647 OR8K3Q8NH51 312 aa13.59□□□□□ -0.23
FGFR1-222ENST00000487647 ADAMTS16Q8TE57 1224 aa13.59□□□□□ -0.23
FGFR1-222ENST00000487647 FBLIM1Q8WUP2 373 aa13.59□□□□□ -0.23
FGFR1-222ENST00000487647 LPAR4Q99677 370 aa13.59□□□□□ -0.23
FGFR1-222ENST00000487647 NIPSNAP1Q9BPW8 284 aa13.59□□□□□ -0.23
FGFR1-222ENST00000487647 DDA1Q9BW61 102 aa13.59□□□□□ -0.23
FGFR1-222ENST00000487647 MRPS26Q9BYN8 205 aaKnown RBP13.59□□□□□ -0.23
FGFR1-222ENST00000487647 UCK2Q9BZX2 261 aa13.59□□□□□ -0.23
FGFR1-222ENST00000487647 WWTR1Q9GZV5 400 aa13.59□□□□□ -0.23
FGFR1-222ENST00000487647 NXF5Q9H1B4 397 aaKnown RBP13.59□□□□□ -0.23
FGFR1-222ENST00000487647 TUBA8Q9NY65 449 aaPredicted RBP13.59□□□□□ -0.23
FGFR1-222ENST00000487647 CACNA1HO95180 2353 aa13.59□□□□□ -0.23
FGFR1-222ENST00000487647 NPIPA5A0A0B4J1W7 369 aa13.58□□□□□ -0.24
FGFR1-222ENST00000487647 TRAPPC13A5PLN9 417 aa13.58□□□□□ -0.24
FGFR1-222ENST00000487647 SERINC4A6NH21 518 aa13.58□□□□□ -0.24
FGFR1-222ENST00000487647 CLDN24A6NM45 220 aa13.58□□□□□ -0.24
FGFR1-222ENST00000487647 CPSF4LA6NMK7 179 aaKnown RBP13.58□□□□□ -0.24
FGFR1-222ENST00000487647 C4orf47A7E2U8 309 aa13.58□□□□□ -0.24
FGFR1-222ENST00000487647 NPIPA7E9PJI5 369 aa13.58□□□□□ -0.24
FGFR1-222ENST00000487647 FRS3O43559 492 aa13.58□□□□□ -0.24
FGFR1-222ENST00000487647 SEC24DO94855 1032 aaPredicted RBP13.58□□□□□ -0.24
FGFR1-222ENST00000487647 NPIPA8P0DM63 369 aa13.58□□□□□ -0.24
FGFR1-222ENST00000487647 ZNF28P17035 718 aa13.58□□□□□ -0.24
FGFR1-222ENST00000487647 POLR2IP36954 125 aaKnown RBP13.58□□□□□ -0.24
FGFR1-222ENST00000487647 NUP107P57740 925 aa13.58□□□□□ -0.24
FGFR1-222ENST00000487647 TUBA4AP68366 448 aa13.58□□□□□ -0.24
FGFR1-222ENST00000487647 KLHL26Q53HC5 615 aa13.58□□□□□ -0.24
FGFR1-222ENST00000487647 RBM48Q5RL73 367 aaKnown RBP13.58□□□□□ -0.24
FGFR1-222ENST00000487647 PGBD2Q6P3X8 592 aa13.58□□□□□ -0.24
FGFR1-222ENST00000487647 ZNF613Q6PF04 617 aa13.58□□□□□ -0.24
FGFR1-222ENST00000487647 SHISA6Q6ZSJ9 500 aa13.58□□□□□ -0.24
FGFR1-222ENST00000487647 RRM2BQ7LG56 351 aa13.58□□□□□ -0.24
FGFR1-222ENST00000487647 CPEB2Q7Z5Q1 589 aaKnown RBP13.58□□□□□ -0.24
FGFR1-222ENST00000487647 ZNF441Q8N8Z8 693 aa13.58□□□□□ -0.24
FGFR1-222ENST00000487647 NFAM1Q8NET5 270 aaPredicted RBP13.58□□□□□ -0.24
FGFR1-222ENST00000487647 OR4K5Q8NGD3 323 aa13.58□□□□□ -0.24
FGFR1-222ENST00000487647 NUBPLQ8TB37 319 aa13.58□□□□□ -0.24
FGFR1-222ENST00000487647 ACOT11Q8WXI4 607 aaPredicted RBP13.58□□□□□ -0.24
FGFR1-222ENST00000487647 HDAC2Q92769 488 aaKnown RBP13.58□□□□□ -0.24
FGFR1-222ENST00000487647 MR1Q95460 341 aa13.58□□□□□ -0.24
FGFR1-222ENST00000487647 VMP1Q96GC9 406 aa13.58□□□□□ -0.24
FGFR1-222ENST00000487647 SLC41A3Q96GZ6 507 aa13.58□□□□□ -0.24
FGFR1-222ENST00000487647 TAAR9Q96RI9 348 aa13.58□□□□□ -0.24
FGFR1-222ENST00000487647 GAL3ST4Q96RP7 486 aa13.58□□□□□ -0.24
FGFR1-222ENST00000487647 TRIM2Q9C040 744 aa13.58□□□□□ -0.24
FGFR1-222ENST00000487647 TMEM27Q9HBJ8 222 aa13.58□□□□□ -0.24
FGFR1-222ENST00000487647 KRCC1Q9NPI7 259 aaPredicted RBP13.58□□□□□ -0.24
FGFR1-222ENST00000487647 NCDNQ9UBB6 729 aa13.58□□□□□ -0.24
FGFR1-222ENST00000487647 BLOC1S6Q9UL45 172 aa13.58□□□□□ -0.24
FGFR1-222ENST00000487647 CCDC88CQ9P219 2028 aa13.58□□□□□ -0.24
FGFR1-222ENST00000487647 ZNF318Q5VUA4 2279 aa13.58□□□□□ -0.24
FGFR1-222ENST00000487647 CNOT3O75175 753 aaKnown RBP13.57□□□□□ -0.24
FGFR1-222ENST00000487647 NGFRP08138 427 aa13.57□□□□□ -0.24
FGFR1-222ENST00000487647 OSMP13725 252 aa13.57□□□□□ -0.24
FGFR1-222ENST00000487647 KRT20P35900 424 aa13.57□□□□□ -0.24
FGFR1-222ENST00000487647 CXCR4P61073 352 aa13.57□□□□□ -0.24
FGFR1-222ENST00000487647 ALDH6A1Q02252 535 aaKnown RBP13.57□□□□□ -0.24
FGFR1-222ENST00000487647 TARDBPQ13148 414 aaKnown RBP eCLIP13.57□□□□□ -0.24
FGFR1-222ENST00000487647 NNATQ16517 81 aa13.57□□□□□ -0.24
FGFR1-222ENST00000487647 FAAH2Q6GMR7 532 aa13.57□□□□□ -0.24
FGFR1-222ENST00000487647 LCN10Q6JVE6 187 aa13.57□□□□□ -0.24
FGFR1-222ENST00000487647 HSDL2Q6YN16 418 aa13.57□□□□□ -0.24
FGFR1-222ENST00000487647 RAB11FIP2Q7L804 512 aa13.57□□□□□ -0.24
FGFR1-222ENST00000487647 GDF7Q7Z4P5 450 aa13.57□□□□□ -0.24
FGFR1-222ENST00000487647 GLRX5Q86SX6 157 aa13.57□□□□□ -0.24
FGFR1-222ENST00000487647 RNF113BQ8IZP6 322 aaKnown RBP13.57□□□□□ -0.24
FGFR1-222ENST00000487647 SLC34A3Q8N130 599 aa13.57□□□□□ -0.24
FGFR1-222ENST00000487647 DEPDC4Q8N2C3 294 aa13.57□□□□□ -0.24
FGFR1-222ENST00000487647 TSPAN14Q8NG11 270 aa13.57□□□□□ -0.24
FGFR1-222ENST00000487647 OR5L2Q8NGL0 311 aa13.57□□□□□ -0.24
FGFR1-222ENST00000487647 DNAJB12Q9NXW2 375 aaKnown RBP13.57□□□□□ -0.24
FGFR1-222ENST00000487647 LOC102723996A0A087X1L8 192 aa13.57□□□□□ -0.24
FGFR1-222ENST00000487647 A6NHS1 94 aa13.57□□□□□ -0.24
FGFR1-222ENST00000487647 CLPTM1O96005 669 aa13.57□□□□□ -0.24
FGFR1-222ENST00000487647 CYP4B1P13584 511 aa13.57□□□□□ -0.24
FGFR1-222ENST00000487647 HPGDP15428 266 aa13.57□□□□□ -0.24
FGFR1-222ENST00000487647 TBXA2RP21731 343 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms