RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 CALML5Q9NZT1 146 aa11.72□□□□□ -0.53
HDAC6-229ENST00000486665 SLC7A8Q9UHI5 535 aa11.72□□□□□ -0.53
HDAC6-229ENST00000486665 ANGPT4Q9Y264 503 aa11.72□□□□□ -0.53
HDAC6-229ENST00000486665 SPTBN1Q01082 2364 aaKnown RBP11.72□□□□□ -0.53
HDAC6-229ENST00000486665 ICE1Q9Y2F5 2266 aa11.72□□□□□ -0.53
HDAC6-229ENST00000486665 UNC79Q9P2D8 2635 aa11.72□□□□□ -0.53
HDAC6-229ENST00000486665 TMEM229AB2RXF0 380 aa11.71□□□□□ -0.53
HDAC6-229ENST00000486665 ADAM10O14672 748 aa11.71□□□□□ -0.53
HDAC6-229ENST00000486665 ACOT8O14734 319 aa11.71□□□□□ -0.53
HDAC6-229ENST00000486665 FADS1O60427 444 aa11.71□□□□□ -0.53
HDAC6-229ENST00000486665 NEURL1O76050 574 aa11.71□□□□□ -0.53
HDAC6-229ENST00000486665 OXSR1O95747 527 aaPredicted RBP11.71□□□□□ -0.53
HDAC6-229ENST00000486665 PDGFAP04085 211 aa11.71□□□□□ -0.53
HDAC6-229ENST00000486665 TBXA2RP21731 343 aa11.71□□□□□ -0.53
HDAC6-229ENST00000486665 LCN1P31025 176 aa11.71□□□□□ -0.53
HDAC6-229ENST00000486665 DCTP40126 519 aa11.71□□□□□ -0.53
HDAC6-229ENST00000486665 CYB561P49447 251 aa11.71□□□□□ -0.53
HDAC6-229ENST00000486665 ATP12AP54707 1039 aa11.71□□□□□ -0.53
HDAC6-229ENST00000486665 MLLT10P55197 1068 aa11.71□□□□□ -0.53
HDAC6-229ENST00000486665 HPCAP84074 193 aa11.71□□□□□ -0.53
HDAC6-229ENST00000486665 OC90Q02509 493 aaPredicted RBP11.71□□□□□ -0.53
HDAC6-229ENST00000486665 TRIM25Q14258 630 aaKnown RBP11.71□□□□□ -0.53
HDAC6-229ENST00000486665 ZNF141Q15928 474 aa11.71□□□□□ -0.53
HDAC6-229ENST00000486665 KLHL26Q53HC5 615 aa11.71□□□□□ -0.53
HDAC6-229ENST00000486665 BICRALQ6AI39 1079 aa11.71□□□□□ -0.53
HDAC6-229ENST00000486665 SPINK14Q6IE38 97 aa11.71□□□□□ -0.53
HDAC6-229ENST00000486665 VRK2Q86Y07 508 aa11.71□□□□□ -0.53
HDAC6-229ENST00000486665 SLC30A8Q8IWU4 369 aa11.71□□□□□ -0.53
HDAC6-229ENST00000486665 GPALPP1Q8IXQ4 340 aa11.71□□□□□ -0.53
HDAC6-229ENST00000486665 FAM13CQ8NE31 585 aa11.71□□□□□ -0.53
HDAC6-229ENST00000486665 CATSPER1Q8NEC5 780 aa11.71□□□□□ -0.53
HDAC6-229ENST00000486665 TNIP2Q8NFZ5 429 aa11.71□□□□□ -0.53
HDAC6-229ENST00000486665 SPPL2AQ8TCT8 520 aa11.71□□□□□ -0.53
HDAC6-229ENST00000486665 GRHL3Q8TE85 626 aa11.71□□□□□ -0.53
HDAC6-229ENST00000486665 RNF138Q8WVD3 245 aa11.71□□□□□ -0.53
HDAC6-229ENST00000486665 HAS2Q92819 552 aa11.71□□□□□ -0.53
HDAC6-229ENST00000486665 TAMM41Q96BW9 452 aa11.71□□□□□ -0.53
HDAC6-229ENST00000486665 CCDC124Q96CT7 223 aaKnown RBP11.71□□□□□ -0.53
HDAC6-229ENST00000486665 PSMG3-AS1Q96PY0 264 aa11.71□□□□□ -0.53
HDAC6-229ENST00000486665 UTP23Q9BRU9 249 aaKnown RBP11.71□□□□□ -0.53
HDAC6-229ENST00000486665 MMADHCQ9H3L0 296 aaPredicted RBP11.71□□□□□ -0.53
HDAC6-229ENST00000486665 UBQLN4Q9NRR5 601 aa11.71□□□□□ -0.53
HDAC6-229ENST00000486665 LRFN1Q9P244 771 aa11.71□□□□□ -0.53
HDAC6-229ENST00000486665 ABI3Q9P2A4 366 aa11.71□□□□□ -0.53
HDAC6-229ENST00000486665 SUCOQ9UBS9 1254 aaKnown RBP11.71□□□□□ -0.53
HDAC6-229ENST00000486665 CNOT11Q9UKZ1 510 aaKnown RBP11.71□□□□□ -0.53
HDAC6-229ENST00000486665 ZNF451Q9Y4E5 1061 aa11.71□□□□□ -0.53
HDAC6-229ENST00000486665 PCDHGA10Q9Y5H3 936 aa11.71□□□□□ -0.53
HDAC6-229ENST00000486665 GPC6Q9Y625 555 aaPredicted RBP11.71□□□□□ -0.53
HDAC6-229ENST00000486665 CHCHD2Q9Y6H1 151 aaPredicted RBP11.71□□□□□ -0.53
HDAC6-229ENST00000486665 PRRC2CQ9Y520 2896 aaKnown RBP11.71□□□□□ -0.54
HDAC6-229ENST00000486665 C2orf72A6NCS6 295 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 AGAP5A6NIR3 686 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 CLDN24A6NM45 220 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 C17orf51A8MQB3 221 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 ARPC2O15144 300 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 HS6ST1O60243 411 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 TPST1O60507 370 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 MFN2O95140 757 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 OPN1SWP03999 348 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 CCL3P10147 92 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 ETS2P15036 469 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 NQO1P15559 274 aaKnown RBP11.7□□□□□ -0.54
HDAC6-229ENST00000486665 ATP6V1B2P21281 511 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 RPS4Y1P22090 263 aaKnown RBP11.7□□□□□ -0.54
HDAC6-229ENST00000486665 PTGDSP41222 190 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 UQCRFS1P47985 274 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 TMED10P49755 219 aaKnown RBP11.7□□□□□ -0.54
HDAC6-229ENST00000486665 GAS1P54826 345 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 DMTNQ08495 405 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 BNIP2Q12982 314 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 OR1C1Q15619 314 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 PDZK1Q5T2W1 519 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 INTS11Q5TA45 600 aaKnown RBP11.7□□□□□ -0.54
HDAC6-229ENST00000486665 CYP2R1Q6VVX0 501 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 RTL4Q6ZR62 310 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 PATL1Q86TB9 770 aaKnown RBP11.7□□□□□ -0.54
HDAC6-229ENST00000486665 MARCH3Q86UD3 253 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 SPPL2CQ8IUH8 684 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 DND1Q8IYX4 353 aaKnown RBP11.7□□□□□ -0.54
HDAC6-229ENST00000486665 CYP4Z2PQ8N1L4 340 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 POGLUT1Q8NBL1 392 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 OR10Q1Q8NGQ4 319 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 OR52P1PQ8NH57 321 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 PAQR8Q8TEZ7 354 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 PMM1Q92871 262 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 NTNG2Q96CW9 530 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 TMCO6Q96DC7 493 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 SGCZQ96LD1 299 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 HES7Q9BYE0 225 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 HOXD1Q9GZZ0 328 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 GORASP2Q9H8Y8 452 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 PROK2Q9HC23 129 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 RYDENQ9NUL5 291 aaKnown RBP11.7□□□□□ -0.54
HDAC6-229ENST00000486665 POMPQ9Y244 141 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 CHST2Q9Y4C5 530 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 PCDHGA9Q9Y5G4 932 aaKnown RBP11.7□□□□□ -0.54
HDAC6-229ENST00000486665 CSAG2Q9Y5P2 127 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 SNX13Q9Y5W8 968 aa11.7□□□□□ -0.54
HDAC6-229ENST00000486665 OR5H15A6NDH6 313 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms