RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 RPL4P36578 427 aaKnown RBP3.71□□□□□ -1.82
VPS13A-211ENST00000484581 BDKRB1P46663 353 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 MFAP2P55001 183 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 PLOD1Q02809 727 aaPredicted RBP3.71□□□□□ -1.82
VPS13A-211ENST00000484581 ZNF146Q15072 292 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 PCK2Q16822 640 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 TMEM44Q2T9K0 475 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 MS4A18Q3C1V0 323 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 MOGAT2Q3SYC2 334 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 HSP90AB3PQ58FF7 597 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 CTSL3PQ5NE16 218 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 ARMC12Q5T9G4 340 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 KCNIP4Q6PIL6 250 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 TTC5Q8N0Z6 440 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 DHRSXQ8N5I4 330 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 C15orf54Q8N8G6 183 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 ZNF491Q8N8L2 437 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 AQP11Q8NBQ7 271 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 OR10A7Q8NGE5 316 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 OR9K2Q8NGE7 335 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 FLVCR1-AS1Q8TAF5 88 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 CNIH3Q8TBE1 160 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 RAB3IL1Q8TBN0 382 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 TBCKQ8TEA7 893 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 PGLYRP2Q96PD5 576 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 HSD17B14Q9BPX1 270 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 PARD6BQ9BYG5 372 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 OCR1Q9BZK8 76 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 LRRN3Q9H3W5 708 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 MCCC2Q9HCC0 563 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 SDF2L1Q9HCN8 221 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 RAB20Q9NX57 234 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 MLXQ9UH92 298 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 LCMT1Q9UIC8 334 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 SPATA2Q9UM82 520 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 RASD1Q9Y272 281 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 NOTCH4Q99466 2003 aa3.71□□□□□ -1.82
VPS13A-211ENST00000484581 TTC21BQ7Z4L5 1316 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 NTN3O00634 580 aaPredicted RBP3.7□□□□□ -1.82
VPS13A-211ENST00000484581 NBR2O15453 112 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 TIMM8AO60220 97 aaPredicted RBP3.7□□□□□ -1.82
VPS13A-211ENST00000484581 SNAP91O60641 907 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 SRPX2O60687 465 aaPredicted RBP3.7□□□□□ -1.82
VPS13A-211ENST00000484581 F10P00742 488 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 IGLV1-44P01699 117 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 SNRPCP09234 159 aaKnown RBP3.7□□□□□ -1.82
VPS13A-211ENST00000484581 ZSCAN5DPP0CG00 497 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 HSMCR30P0CW71 290 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 HSD17B1P14061 328 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 MMP11P24347 488 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 ATP5A1P25705 553 aaKnown RBP3.7□□□□□ -1.82
VPS13A-211ENST00000484581 CCR1P32246 355 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 MAGEA8P43361 318 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 P2RY1P47900 373 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 RIDAP52758 137 aaKnown RBP3.7□□□□□ -1.82
VPS13A-211ENST00000484581 HILS1P60008 231 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 RIPPLY1Q0D2K3 151 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 BST1Q10588 318 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 CALCOCO2Q13137 446 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 SRSF5Q13243 272 aaKnown RBP3.7□□□□□ -1.82
VPS13A-211ENST00000484581 PLD1Q13393 1074 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 FASTKD3Q14CZ7 662 aaKnown RBP3.7□□□□□ -1.82
VPS13A-211ENST00000484581 ZIC1Q15915 447 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 CCL14Q16627 93 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 SLC5A12Q1EHB4 618 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 ZFP69Q49AA0 526 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 PRAMEF5Q5TYX0 476 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 PRAMEF6Q5VXH4 476 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 CCBE1Q6UXH8 406 aaPredicted RBP3.7□□□□□ -1.82
VPS13A-211ENST00000484581 STAC2Q6ZMT1 411 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 CYS1Q717R9 158 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 IFNEQ86WN2 208 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 ECHDC2Q86YB7 292 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 TRPV1Q8NER1 839 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 BRSK1Q8TDC3 778 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 SSC4DQ8WTU2 575 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 TAF15Q92804 592 aaKnown RBP eCLIP3.7□□□□□ -1.82
VPS13A-211ENST00000484581 MOCOSQ96EN8 888 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 CCNL2Q96S94 520 aaPredicted RBP3.7□□□□□ -1.82
VPS13A-211ENST00000484581 ROPN1BQ9BZX4 212 aaPredicted RBP3.7□□□□□ -1.82
VPS13A-211ENST00000484581 RNF41Q9H4P4 317 aaPredicted RBP3.7□□□□□ -1.82
VPS13A-211ENST00000484581 ZDHHC18Q9NUE0 388 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 ZNF446Q9NWS9 450 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 SPATA7Q9P0W8 599 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 THAP10Q9P2Z0 257 aaPredicted RBP3.7□□□□□ -1.82
VPS13A-211ENST00000484581 CACNG5Q9UF02 275 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 ZNF221Q9UK13 617 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 GAB2Q9UQC2 676 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 IFT52Q9Y366 437 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 ALG6Q9Y672 507 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 PNPLA6Q8IY17 1366 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 FRMPD4Q14CM0 1322 aa3.7□□□□□ -1.82
VPS13A-211ENST00000484581 METP08581 1390 aa3.69□□□□□ -1.82
VPS13A-211ENST00000484581 OR6C65A6NJZ3 312 aa3.69□□□□□ -1.82
VPS13A-211ENST00000484581 G3V4G9 280 aa3.69□□□□□ -1.82
VPS13A-211ENST00000484581 TRIM3O75382 744 aaPredicted RBP3.69□□□□□ -1.82
VPS13A-211ENST00000484581 WBP4O75554 376 aaKnown RBP3.69□□□□□ -1.82
VPS13A-211ENST00000484581 LRATO95237 230 aa3.69□□□□□ -1.82
VPS13A-211ENST00000484581 IGHV3-9P01782 118 aa3.69□□□□□ -1.82
VPS13A-211ENST00000484581 IGHG3P01860 377 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms