RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 NPTX1Q15818 432 aa15.91■□□□□ 0.14
MRPL28-210ENST00000483764 TMEM205Q6UW68 189 aa15.91■□□□□ 0.14
MRPL28-210ENST00000483764 WDR53Q7Z5U6 358 aaPredicted RBP15.91■□□□□ 0.14
MRPL28-210ENST00000483764 ZNF605Q86T29 641 aa15.91■□□□□ 0.14
MRPL28-210ENST00000483764 ZNF615Q8N8J6 731 aa15.91■□□□□ 0.14
MRPL28-210ENST00000483764 OR10Q1Q8NGQ4 319 aa15.91■□□□□ 0.14
MRPL28-210ENST00000483764 OR2Y1Q8NGV0 311 aa15.91■□□□□ 0.14
MRPL28-210ENST00000483764 SLC38A5Q8WUX1 472 aa15.91■□□□□ 0.14
MRPL28-210ENST00000483764 SLC9A6Q92581 669 aa15.91■□□□□ 0.14
MRPL28-210ENST00000483764 PROX1Q92786 737 aa15.91■□□□□ 0.14
MRPL28-210ENST00000483764 SLC35A4Q96G79 324 aa15.91■□□□□ 0.14
MRPL28-210ENST00000483764 OR8D2Q9GZM6 311 aa15.91■□□□□ 0.14
MRPL28-210ENST00000483764 OR10A5Q9H207 317 aa15.91■□□□□ 0.14
MRPL28-210ENST00000483764 P2RX2Q9UBL9 471 aa15.91■□□□□ 0.14
MRPL28-210ENST00000483764 CEP250Q9BV73 2442 aa15.9■□□□□ 0.14
MRPL28-210ENST00000483764 SH3D21A4FU49 640 aa15.9■□□□□ 0.14
MRPL28-210ENST00000483764 PTGES3LE9PB15 166 aa15.9■□□□□ 0.14
MRPL28-210ENST00000483764 BRINP1O60477 761 aa15.9■□□□□ 0.14
MRPL28-210ENST00000483764 DDAH2O95865 285 aa15.9■□□□□ 0.14
MRPL28-210ENST00000483764 AGR2O95994 175 aa15.9■□□□□ 0.14
MRPL28-210ENST00000483764 RAB40ALP0C0E4 278 aa15.9■□□□□ 0.14
MRPL28-210ENST00000483764 ACVR2AP27037 513 aa15.9■□□□□ 0.14
MRPL28-210ENST00000483764 EMX1Q04741 257 aaPredicted RBP15.9■□□□□ 0.14
MRPL28-210ENST00000483764 PPP1R8Q12972 351 aaKnown RBP15.9■□□□□ 0.14
MRPL28-210ENST00000483764 COLEC12Q5KU26 742 aa15.9■□□□□ 0.14
MRPL28-210ENST00000483764 EXOSC6Q5RKV6 272 aaKnown RBP15.9■□□□□ 0.14
MRPL28-210ENST00000483764 FAM69BQ5VUD6 431 aa15.9■□□□□ 0.14
MRPL28-210ENST00000483764 SLC44A2Q8IWA5 706 aaPredicted RBP15.9■□□□□ 0.14
MRPL28-210ENST00000483764 NLGN4XQ8N0W4 816 aa15.9■□□□□ 0.14
MRPL28-210ENST00000483764 MORN4Q8NDC4 146 aa15.9■□□□□ 0.14
MRPL28-210ENST00000483764 ZNF540Q8NDQ6 660 aa15.9■□□□□ 0.14
MRPL28-210ENST00000483764 NLGN4YQ8NFZ3 816 aaPredicted RBP15.9■□□□□ 0.14
MRPL28-210ENST00000483764 C9orf43Q8TAL5 461 aaPredicted RBP15.9■□□□□ 0.14
MRPL28-210ENST00000483764 SLC2A12Q8TD20 617 aa15.9■□□□□ 0.14
MRPL28-210ENST00000483764 PHF10Q8WUB8 498 aaKnown RBP15.9■□□□□ 0.14
MRPL28-210ENST00000483764 CT55Q8WUE5 264 aa15.9■□□□□ 0.14
MRPL28-210ENST00000483764 FAR1Q8WVX9 515 aa15.9■□□□□ 0.14
MRPL28-210ENST00000483764 ART5Q96L15 291 aa15.9■□□□□ 0.14
MRPL28-210ENST00000483764 FEVQ99581 238 aa15.9■□□□□ 0.14
MRPL28-210ENST00000483764 FUNDC2Q9BWH2 189 aa15.9■□□□□ 0.14
MRPL28-210ENST00000483764 CCDC90BQ9GZT6 254 aa15.9■□□□□ 0.14
MRPL28-210ENST00000483764 C19orf25Q9UFG5 118 aaPredicted RBP15.9■□□□□ 0.14
MRPL28-210ENST00000483764 HEMK1Q9Y5R4 338 aaPredicted RBP15.9■□□□□ 0.14
MRPL28-210ENST00000483764 KCNE3Q9Y6H6 103 aa15.9■□□□□ 0.14
MRPL28-210ENST00000483764 IGHV3-20A0A0C4DH32 117 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 DCDC2BA2VCK2 349 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 PRAMEF27A3QJZ7 478 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 CLPXO76031 633 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 GADD45GO95257 159 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 ADAP00813 363 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 CLPSP04118 112 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 IGKV3-11P04433 115 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 UMODP07911 640 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 ALOX5P09917 674 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 NR2F1P10589 423 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 ACP2P11117 423 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 AQP1P29972 269 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 KRT20P35900 424 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 MAP3K8P41279 467 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 FOLR3P41439 243 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 ZNF155Q12901 538 aaPredicted RBP15.89■□□□□ 0.13
MRPL28-210ENST00000483764 SYPL1Q16563 259 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 DUSP5Q16690 384 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 ATAD3BQ5T9A4 648 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 UBE2UQ5VVX9 321 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 CPEB2Q7Z5Q1 589 aaKnown RBP15.89■□□□□ 0.13
MRPL28-210ENST00000483764 C16orf52Q8NHV5 167 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 BBS10Q8TAM1 723 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 CNIH3Q8TBE1 160 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 ZNF721Q8TF20 911 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 HOXB13Q92826 284 aaPredicted RBP15.89■□□□□ 0.13
MRPL28-210ENST00000483764 SIGLEC11Q96RL6 698 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 BARD1Q99728 777 aaKnown RBP15.89■□□□□ 0.13
MRPL28-210ENST00000483764 PIGUQ9H490 435 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 LIN28AQ9H9Z2 209 aaKnown RBP15.89■□□□□ 0.13
MRPL28-210ENST00000483764 FOLH1BQ9HBA9 442 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 DUSP22Q9NRW4 184 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 PRODH2Q9UF12 536 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 TMCC3Q9ULS5 477 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 LIPT1Q9Y234 373 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 B3GNT3Q9Y2A9 372 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 TESMINQ9Y4I5 508 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 PCDHGA10Q9Y5H3 936 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 CNOT1A5YKK6 2376 aaKnown RBP15.89■□□□□ 0.13
MRPL28-210ENST00000483764 A0A1W2PPW3 197 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 SH3PXD2BA1X283 911 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 STMND1H3BQB6 276 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 SLC28A2O43868 658 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 RAD1O60671 282 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 SOX30O94993 753 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 DIRAS1O95057 198 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 BCHEP06276 602 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 CDH12P55289 794 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 SLC37A1P57057 533 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 CDC42P60953 191 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 RPS15P62841 145 aaKnown RBP15.89■□□□□ 0.13
MRPL28-210ENST00000483764 ZNHIT3Q15649 155 aaPredicted RBP15.89■□□□□ 0.13
MRPL28-210ENST00000483764 MAPK11Q15759 364 aa15.89■□□□□ 0.13
MRPL28-210ENST00000483764 TBCEQ15813 527 aaPredicted RBP15.89■□□□□ 0.13
MRPL28-210ENST00000483764 ANKRD34AQ69YU3 496 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms