RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 SDF2Q99470 211 aa16.34■□□□□ 0.21
HDAC6-225ENST00000483506 SIKE1Q9BRV8 207 aa16.34■□□□□ 0.21
HDAC6-225ENST00000483506 SLC35A5Q9BS91 424 aa16.34■□□□□ 0.21
HDAC6-225ENST00000483506 TTYH2Q9BSA4 534 aa16.34■□□□□ 0.21
HDAC6-225ENST00000483506 DSN1Q9H410 356 aa16.34■□□□□ 0.21
HDAC6-225ENST00000483506 MED4Q9NPJ6 270 aa16.34■□□□□ 0.21
HDAC6-225ENST00000483506 TMEM45AQ9NWC5 275 aa16.34■□□□□ 0.21
HDAC6-225ENST00000483506 DKKL1Q9UK85 242 aa16.34■□□□□ 0.21
HDAC6-225ENST00000483506 PCNX3Q9H6A9 2034 aa16.34■□□□□ 0.21
HDAC6-225ENST00000483506 CCDC154A6NI56 674 aa16.33■□□□□ 0.2
HDAC6-225ENST00000483506 ATP8B1O43520 1251 aa16.33■□□□□ 0.2
HDAC6-225ENST00000483506 NDUFB5O43674 189 aa16.33■□□□□ 0.2
HDAC6-225ENST00000483506 GLI4P10075 376 aa16.33■□□□□ 0.2
HDAC6-225ENST00000483506 CPN1P15169 458 aa16.33■□□□□ 0.2
HDAC6-225ENST00000483506 ATP6V1C1P21283 382 aa16.33■□□□□ 0.2
HDAC6-225ENST00000483506 CHMP24386 653 aa16.33■□□□□ 0.2
HDAC6-225ENST00000483506 CDKN2CP42773 168 aa16.33■□□□□ 0.2
HDAC6-225ENST00000483506 ATP4BP51164 291 aa16.33■□□□□ 0.2
HDAC6-225ENST00000483506 POLR2JP52435 117 aaKnown RBP16.33■□□□□ 0.2
HDAC6-225ENST00000483506 NUP107P57740 925 aa16.33■□□□□ 0.2
HDAC6-225ENST00000483506 B3GALT5-AS1P59052 145 aa16.33■□□□□ 0.2
HDAC6-225ENST00000483506 STX5Q13190 355 aa16.33■□□□□ 0.2
HDAC6-225ENST00000483506 ARHGAP11BQ3KRB8 267 aa16.33■□□□□ 0.2
HDAC6-225ENST00000483506 KLHL26Q53HC5 615 aa16.33■□□□□ 0.2
HDAC6-225ENST00000483506 ARFGAP2Q8N6H7 521 aa16.33■□□□□ 0.2
HDAC6-225ENST00000483506 INPP5KQ9BT40 448 aa16.33■□□□□ 0.2
HDAC6-225ENST00000483506 NMUR2Q9GZQ4 415 aa16.33■□□□□ 0.2
HDAC6-225ENST00000483506 ZNF350Q9GZX5 532 aa16.33■□□□□ 0.2
HDAC6-225ENST00000483506 OR51I1Q9H343 314 aa16.33■□□□□ 0.2
HDAC6-225ENST00000483506 PTGES2Q9H7Z7 377 aa16.33■□□□□ 0.2
HDAC6-225ENST00000483506 MED11Q9P086 117 aa16.33■□□□□ 0.2
HDAC6-225ENST00000483506 SCDO00767 359 aa16.32■□□□□ 0.2
HDAC6-225ENST00000483506 CLDN14O95500 239 aa16.32■□□□□ 0.2
HDAC6-225ENST00000483506 ZCCHC18P0CG32 403 aa16.32■□□□□ 0.2
HDAC6-225ENST00000483506 MSX1P28360 303 aa16.32■□□□□ 0.2
HDAC6-225ENST00000483506 DCTP40126 519 aa16.32■□□□□ 0.2
HDAC6-225ENST00000483506 MAGEA8P43361 318 aa16.32■□□□□ 0.2
HDAC6-225ENST00000483506 KHKP50053 298 aa16.32■□□□□ 0.2
HDAC6-225ENST00000483506 LHX2P50458 406 aa16.32■□□□□ 0.2
HDAC6-225ENST00000483506 ATP12AP54707 1039 aa16.32■□□□□ 0.2
HDAC6-225ENST00000483506 STX1BP61266 288 aa16.32■□□□□ 0.2
HDAC6-225ENST00000483506 RCAN2Q14206 197 aa16.32■□□□□ 0.2
HDAC6-225ENST00000483506 SF3B4Q15427 424 aaKnown RBP eCLIP16.32■□□□□ 0.2
HDAC6-225ENST00000483506 CDSNQ15517 529 aa16.32■□□□□ 0.2
HDAC6-225ENST00000483506 TMEM44Q2T9K0 475 aa16.32■□□□□ 0.2
HDAC6-225ENST00000483506 ACSF3Q4G176 576 aaPredicted RBP16.32■□□□□ 0.2
HDAC6-225ENST00000483506 AAGABQ6PD74 315 aa16.32■□□□□ 0.2
HDAC6-225ENST00000483506 MTERF4Q7Z6M4 381 aaKnown RBP16.32■□□□□ 0.2
HDAC6-225ENST00000483506 ZNF527Q8NB42 609 aa16.32■□□□□ 0.2
HDAC6-225ENST00000483506 ASB5Q8WWX0 329 aa16.32■□□□□ 0.2
HDAC6-225ENST00000483506 OIT3Q8WWZ8 545 aa16.32■□□□□ 0.2
HDAC6-225ENST00000483506 RND1Q92730 232 aa16.32■□□□□ 0.2
HDAC6-225ENST00000483506 EXD2Q9NVH0 621 aa16.32■□□□□ 0.2
HDAC6-225ENST00000483506 CENPEQ02224 2701 aa16.32■□□□□ 0.2
HDAC6-225ENST00000483506 FAM47E-STBD1D6RA91 191 aa16.31■□□□□ 0.2
HDAC6-225ENST00000483506 LINC01387J3KSC0 135 aa16.31■□□□□ 0.2
HDAC6-225ENST00000483506 RFXANKO14593 260 aa16.31■□□□□ 0.2
HDAC6-225ENST00000483506 EPPINO95925 133 aa16.31■□□□□ 0.2
HDAC6-225ENST00000483506 HPGDP15428 266 aa16.31■□□□□ 0.2
HDAC6-225ENST00000483506 ZNF708P17019 499 aa16.31■□□□□ 0.2
HDAC6-225ENST00000483506 CHI3L1P36222 383 aaPredicted RBP16.31■□□□□ 0.2
HDAC6-225ENST00000483506 PMPCAQ10713 525 aa16.31■□□□□ 0.2
HDAC6-225ENST00000483506 CD226Q15762 336 aa16.31■□□□□ 0.2
HDAC6-225ENST00000483506 BCL2A1Q16548 175 aa16.31■□□□□ 0.2
HDAC6-225ENST00000483506 ZNF630Q2M218 657 aaPredicted RBP16.31■□□□□ 0.2
HDAC6-225ENST00000483506 FLYWCH1Q4VC44 716 aa16.31■□□□□ 0.2
HDAC6-225ENST00000483506 TIGD2Q4W5G0 525 aa16.31■□□□□ 0.2
HDAC6-225ENST00000483506 HSP90B2PQ58FF3 399 aa16.31■□□□□ 0.2
HDAC6-225ENST00000483506 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.31■□□□□ 0.2
HDAC6-225ENST00000483506 RIPPLY2Q5TAB7 128 aa16.31■□□□□ 0.2
HDAC6-225ENST00000483506 TNFAIP8L2Q6P589 184 aaPredicted RBP16.31■□□□□ 0.2
HDAC6-225ENST00000483506 ENPP6Q6UWR7 440 aa16.31■□□□□ 0.2
HDAC6-225ENST00000483506 SEM1Q6ZVN7 128 aa16.31■□□□□ 0.2
HDAC6-225ENST00000483506 FUNDC1Q8IVP5 155 aa16.31■□□□□ 0.2
HDAC6-225ENST00000483506 ZPLD1Q8TCW7 415 aa16.31■□□□□ 0.2
HDAC6-225ENST00000483506 SFXN2Q96NB2 322 aa16.31■□□□□ 0.2
HDAC6-225ENST00000483506 RMND5AQ9H871 391 aa16.31■□□□□ 0.2
HDAC6-225ENST00000483506 POLE3Q9NRF9 147 aa16.31■□□□□ 0.2
HDAC6-225ENST00000483506 COQ3Q9NZJ6 369 aa16.31■□□□□ 0.2
HDAC6-225ENST00000483506 CAMK2AQ9UQM7 478 aa16.31■□□□□ 0.2
HDAC6-225ENST00000483506 RNF6Q9Y252 685 aa16.31■□□□□ 0.2
HDAC6-225ENST00000483506 A0A087WZY1 265 aa16.3■□□□□ 0.2
HDAC6-225ENST00000483506 C7orf72A4D263 438 aa16.3■□□□□ 0.2
HDAC6-225ENST00000483506 STX11O75558 287 aa16.3■□□□□ 0.2
HDAC6-225ENST00000483506 C1QCP02747 245 aa16.3■□□□□ 0.2
HDAC6-225ENST00000483506 OR12D1P0DN82 309 aa16.3■□□□□ 0.2
HDAC6-225ENST00000483506 HK1P19367 917 aa16.3■□□□□ 0.2
HDAC6-225ENST00000483506 CHRNB4P30926 498 aa16.3■□□□□ 0.2
HDAC6-225ENST00000483506 CLDN18P56856 261 aa16.3■□□□□ 0.2
HDAC6-225ENST00000483506 FUT5Q11128 374 aa16.3■□□□□ 0.2
HDAC6-225ENST00000483506 ZNF141Q15928 474 aa16.3■□□□□ 0.2
HDAC6-225ENST00000483506 ATAD3BQ5T9A4 648 aa16.3■□□□□ 0.2
HDAC6-225ENST00000483506 NSUN5P2Q63ZY6 315 aa16.3■□□□□ 0.2
HDAC6-225ENST00000483506 BLOC1S3Q6QNY0 202 aa16.3■□□□□ 0.2
HDAC6-225ENST00000483506 ZNF621Q6ZSS3 439 aa16.3■□□□□ 0.2
HDAC6-225ENST00000483506 ADGRE4PQ86SQ3 457 aa16.3■□□□□ 0.2
HDAC6-225ENST00000483506 RNF130Q86XS8 419 aa16.3■□□□□ 0.2
HDAC6-225ENST00000483506 LACC1Q8IV20 430 aa16.3■□□□□ 0.2
HDAC6-225ENST00000483506 ZFP90Q8TF47 636 aa16.3■□□□□ 0.2
HDAC6-225ENST00000483506 SDCCAG3Q96C92 435 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms