RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 CASC3O15234 703 aaKnown RBP13.37□□□□□ -0.27
COL9A2-207ENST00000482722 EFCAB14O75071 495 aa13.37□□□□□ -0.27
COL9A2-207ENST00000482722 RGS11O94810 467 aa13.37□□□□□ -0.27
COL9A2-207ENST00000482722 CD3GP09693 182 aa13.37□□□□□ -0.27
COL9A2-207ENST00000482722 UQCRC2P22695 453 aa13.37□□□□□ -0.27
COL9A2-207ENST00000482722 SHEQ5VZ18 495 aa13.37□□□□□ -0.27
COL9A2-207ENST00000482722 WASH2PQ6VEQ5 465 aa13.37□□□□□ -0.27
COL9A2-207ENST00000482722 TFAP2EQ6VUC0 442 aa13.37□□□□□ -0.27
COL9A2-207ENST00000482722 RADILQ96JH8 1075 aa13.37□□□□□ -0.27
COL9A2-207ENST00000482722 CXorf58Q96LI9 332 aa13.37□□□□□ -0.27
COL9A2-207ENST00000482722 EFCAB11Q9BUY7 163 aa13.37□□□□□ -0.27
COL9A2-207ENST00000482722 NLGN3Q9NZ94 848 aa13.37□□□□□ -0.27
COL9A2-207ENST00000482722 KIF25Q9UIL4 384 aa13.37□□□□□ -0.27
COL9A2-207ENST00000482722 ASF1AQ9Y294 204 aa13.37□□□□□ -0.27
COL9A2-207ENST00000482722 TMEM5Q9Y2B1 443 aa13.37□□□□□ -0.27
COL9A2-207ENST00000482722 IRGMA1A4Y4 181 aa13.37□□□□□ -0.27
COL9A2-207ENST00000482722 SLC22A23A1A5C7 686 aa13.37□□□□□ -0.27
COL9A2-207ENST00000482722 GAAP10253 952 aa13.37□□□□□ -0.27
COL9A2-207ENST00000482722 LCN1P31025 176 aa13.37□□□□□ -0.27
COL9A2-207ENST00000482722 RFX3P48380 749 aa13.37□□□□□ -0.27
COL9A2-207ENST00000482722 NLRC3Q7RTR2 1065 aa13.37□□□□□ -0.27
COL9A2-207ENST00000482722 C6orf120Q7Z4R8 191 aa13.37□□□□□ -0.27
COL9A2-207ENST00000482722 KLBQ86Z14 1044 aa13.37□□□□□ -0.27
COL9A2-207ENST00000482722 SIAH3Q8IW03 269 aa13.37□□□□□ -0.27
COL9A2-207ENST00000482722 EXOSC8Q96B26 276 aaKnown RBP13.37□□□□□ -0.27
COL9A2-207ENST00000482722 ZNF707Q96C28 371 aaPredicted RBP13.37□□□□□ -0.27
COL9A2-207ENST00000482722 ERMAPQ96PL5 475 aaPredicted RBP13.37□□□□□ -0.27
COL9A2-207ENST00000482722 TREX2Q9BQ50 279 aaPredicted RBP13.37□□□□□ -0.27
COL9A2-207ENST00000482722 YIPF4Q9BSR8 244 aa13.37□□□□□ -0.27
COL9A2-207ENST00000482722 FNDC11Q9BVV2 318 aa13.37□□□□□ -0.27
COL9A2-207ENST00000482722 IFT46Q9NQC8 304 aa13.37□□□□□ -0.27
COL9A2-207ENST00000482722 MUC3AQ02505 3323 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 LGALS8O00214 317 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 SOX30O94993 753 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 HPXP02790 462 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 RBMS1P29558 406 aaKnown RBP13.36□□□□□ -0.27
COL9A2-207ENST00000482722 ACSL1P33121 698 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 MMP12P39900 470 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 GPR1P46091 355 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 OPCMLQ14982 345 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 DHCR24Q15392 516 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 ZNF77Q15935 545 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 NHLRC3Q5JS37 347 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 KIAA1161Q6NSJ0 714 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 C11orf96Q7Z7L8 435 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 OR9A1PQ8NGU1 263 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 MRGPRX3Q96LB0 322 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 ZNF354BQ96LW1 612 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 QRSL1Q9H0R6 528 aaKnown RBP13.36□□□□□ -0.27
COL9A2-207ENST00000482722 MYNNQ9NPC7 610 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 CNIH4Q9P003 139 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 PTGFRNQ9P2B2 879 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 ACAD8Q9UKU7 415 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 CBLCQ9ULV8 474 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 SPATA2Q9UM82 520 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 HRH3Q9Y5N1 445 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 HMGN4O00479 90 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 FRS3O43559 492 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 SERPIND1P05546 499 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 PROS1P07225 676 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 H2AFB2P0C5Z0 115 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 THBS2P35442 1172 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 WASP42768 502 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 TSPAN5P62079 268 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 CNTN1Q12860 1018 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 ZSWIM7Q19AV6 140 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 HBMQ6B0K9 141 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 NXPE4Q6UWF7 544 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 TOMM5Q8N4H5 51 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 ZNF527Q8NB42 609 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 ADAMTS14Q8WXS8 1223 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 ST8SIA2Q92186 375 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 SFXN2Q96NB2 322 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 F2RL3Q96RI0 385 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 DDOQ99489 341 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 ZNF436Q9C0F3 470 aaPredicted RBP13.36□□□□□ -0.27
COL9A2-207ENST00000482722 BRD7Q9NPI1 651 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 TRPC4Q9UBN4 977 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 RASD1Q9Y272 281 aa13.36□□□□□ -0.27
COL9A2-207ENST00000482722 FEZF1A0PJY2 475 aa13.35□□□□□ -0.27
COL9A2-207ENST00000482722 PRAMEF27A3QJZ7 478 aa13.35□□□□□ -0.27
COL9A2-207ENST00000482722 TEX46H3BTG2 121 aa13.35□□□□□ -0.27
COL9A2-207ENST00000482722 MMP20O60882 483 aa13.35□□□□□ -0.27
COL9A2-207ENST00000482722 SRPRAP08240 638 aaKnown RBP13.35□□□□□ -0.27
COL9A2-207ENST00000482722 KCNJ5P48544 419 aa13.35□□□□□ -0.27
COL9A2-207ENST00000482722 OR10A3P58181 314 aa13.35□□□□□ -0.27
COL9A2-207ENST00000482722 LRFN4Q6PJG9 635 aa13.35□□□□□ -0.27
COL9A2-207ENST00000482722 CD300LDQ6UXZ3 194 aa13.35□□□□□ -0.27
COL9A2-207ENST00000482722 DPPA4Q7L190 304 aa13.35□□□□□ -0.27
COL9A2-207ENST00000482722 GET4Q7L5D6 327 aaPredicted RBP13.35□□□□□ -0.27
COL9A2-207ENST00000482722 FBXO15Q8NCQ5 510 aaPredicted RBP13.35□□□□□ -0.27
COL9A2-207ENST00000482722 OR6T1Q8NGN1 323 aa13.35□□□□□ -0.27
COL9A2-207ENST00000482722 OR5AR1Q8NGP9 310 aa13.35□□□□□ -0.27
COL9A2-207ENST00000482722 PTP4A1Q93096 173 aa13.35□□□□□ -0.27
COL9A2-207ENST00000482722 SPRTNQ9H040 489 aaPredicted RBP13.35□□□□□ -0.27
COL9A2-207ENST00000482722 SERHL2Q9H4I8 314 aa13.35□□□□□ -0.27
COL9A2-207ENST00000482722 MAN2C1Q9NTJ4 1040 aa13.35□□□□□ -0.27
COL9A2-207ENST00000482722 POMT2Q9UKY4 750 aa13.35□□□□□ -0.27
COL9A2-207ENST00000482722 CLEC4AQ9UMR7 237 aa13.35□□□□□ -0.27
COL9A2-207ENST00000482722 POM121CA8CG34 1229 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms