RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 ANAPC7Q9UJX3 599 aa4.17□□□□□ -1.74
SF3B1-210ENST00000482158 MOKQ9UQ07 419 aa4.17□□□□□ -1.74
SF3B1-210ENST00000482158 RAI1Q7Z5J4 1906 aaPredicted RBP4.17□□□□□ -1.74
SF3B1-210ENST00000482158 A0A1B0GWJ7 208 aa4.16□□□□□ -1.74
SF3B1-210ENST00000482158 CTAGE5O15320 804 aa4.16□□□□□ -1.74
SF3B1-210ENST00000482158 SCRG1O75711 98 aa4.16□□□□□ -1.74
SF3B1-210ENST00000482158 HTR2AP28223 471 aa4.16□□□□□ -1.74
SF3B1-210ENST00000482158 BDKRB1P46663 353 aa4.16□□□□□ -1.74
SF3B1-210ENST00000482158 ACADVLP49748 655 aa4.16□□□□□ -1.74
SF3B1-210ENST00000482158 OSTNP61366 133 aa4.16□□□□□ -1.74
SF3B1-210ENST00000482158 CD47Q08722 323 aa4.16□□□□□ -1.74
SF3B1-210ENST00000482158 RNF212Q495C1 297 aa4.16□□□□□ -1.74
SF3B1-210ENST00000482158 TEX44Q53QW1 395 aa4.16□□□□□ -1.74
SF3B1-210ENST00000482158 PRR30Q53SZ7 412 aaPredicted RBP4.16□□□□□ -1.74
SF3B1-210ENST00000482158 RIPPLY2Q5TAB7 128 aa4.16□□□□□ -1.74
SF3B1-210ENST00000482158 SERPINA9Q86WD7 417 aa4.16□□□□□ -1.74
SF3B1-210ENST00000482158 CENPLQ8N0S6 344 aaPredicted RBP4.16□□□□□ -1.74
SF3B1-210ENST00000482158 LINC01561Q8N1V8 128 aa4.16□□□□□ -1.74
SF3B1-210ENST00000482158 ZSCAN4Q8NAM6 433 aaPredicted RBP4.16□□□□□ -1.74
SF3B1-210ENST00000482158 OR2T33Q8NG76 320 aa4.16□□□□□ -1.74
SF3B1-210ENST00000482158 OR13F1Q8NGS4 319 aa4.16□□□□□ -1.74
SF3B1-210ENST00000482158 SLC30A2Q9BRI3 323 aa4.16□□□□□ -1.74
SF3B1-210ENST00000482158 VNN3Q9NY84 501 aa4.16□□□□□ -1.74
SF3B1-210ENST00000482158 CHRNA9Q9UGM1 479 aa4.16□□□□□ -1.74
SF3B1-210ENST00000482158 SMC3Q9UQE7 1217 aa4.16□□□□□ -1.74
SF3B1-210ENST00000482158 K7ENP7 123 aa4.15□□□□□ -1.75
SF3B1-210ENST00000482158 CD55P08174 381 aa4.15□□□□□ -1.75
SF3B1-210ENST00000482158 P0C879 139 aa4.15□□□□□ -1.75
SF3B1-210ENST00000482158 MAGEA5P43359 124 aa4.15□□□□□ -1.75
SF3B1-210ENST00000482158 VLDLRP98155 873 aa4.15□□□□□ -1.75
SF3B1-210ENST00000482158 ATXN7L3Q14CW9 347 aaPredicted RBP4.15□□□□□ -1.75
SF3B1-210ENST00000482158 ZNF677Q86XU0 584 aa4.15□□□□□ -1.75
SF3B1-210ENST00000482158 C11orf42Q8N5U0 333 aa4.15□□□□□ -1.75
SF3B1-210ENST00000482158 CNIH3Q8TBE1 160 aa4.15□□□□□ -1.75
SF3B1-210ENST00000482158 DTNBP1Q96EV8 351 aa4.15□□□□□ -1.75
SF3B1-210ENST00000482158 TSGA13Q96PP4 275 aa4.15□□□□□ -1.75
SF3B1-210ENST00000482158 GSDMCQ9BYG8 508 aa4.15□□□□□ -1.75
SF3B1-210ENST00000482158 MEAF6Q9HAF1 191 aa4.15□□□□□ -1.75
SF3B1-210ENST00000482158 ZNF275Q9NSD4 429 aaPredicted RBP4.15□□□□□ -1.75
SF3B1-210ENST00000482158 MRPL39Q9NYK5 338 aaKnown RBP4.15□□□□□ -1.75
SF3B1-210ENST00000482158 ISY1Q9ULR0 285 aaKnown RBP4.15□□□□□ -1.75
SF3B1-210ENST00000482158 ATP6V0A2Q9Y487 856 aa4.15□□□□□ -1.75
SF3B1-210ENST00000482158 IGLV8-61A0A075B6I0 122 aa4.14□□□□□ -1.75
SF3B1-210ENST00000482158 KLF18A0A0U1RQI7 1052 aa4.14□□□□□ -1.75
SF3B1-210ENST00000482158 E9PLD3 99 aa4.14□□□□□ -1.75
SF3B1-210ENST00000482158 STX7O15400 261 aaKnown RBP4.14□□□□□ -1.75
SF3B1-210ENST00000482158 NEBLO76041 1014 aa4.14□□□□□ -1.75
SF3B1-210ENST00000482158 ANP32DO95626 131 aa4.14□□□□□ -1.75
SF3B1-210ENST00000482158 IGKV3-15P01624 115 aa4.14□□□□□ -1.75
SF3B1-210ENST00000482158 CSF2P04141 144 aa4.14□□□□□ -1.75
SF3B1-210ENST00000482158 ASNSP08243 561 aa4.14□□□□□ -1.75
SF3B1-210ENST00000482158 HBQ1P09105 142 aa4.14□□□□□ -1.75
SF3B1-210ENST00000482158 HPDP32754 393 aaPredicted RBP4.14□□□□□ -1.75
SF3B1-210ENST00000482158 KIF5BP33176 963 aa4.14□□□□□ -1.75
SF3B1-210ENST00000482158 NF2P35240 595 aa4.14□□□□□ -1.75
SF3B1-210ENST00000482158 STARP49675 285 aa4.14□□□□□ -1.75
SF3B1-210ENST00000482158 NTHL1P78549 312 aa4.14□□□□□ -1.75
SF3B1-210ENST00000482158 IGLV3-21P80748 117 aaPredicted RBP4.14□□□□□ -1.75
SF3B1-210ENST00000482158 CNTN2Q02246 1040 aa4.14□□□□□ -1.75
SF3B1-210ENST00000482158 RGS1Q08116 209 aa4.14□□□□□ -1.75
SF3B1-210ENST00000482158 KLHL30Q0D2K2 578 aa4.14□□□□□ -1.75
SF3B1-210ENST00000482158 ST3GAL3Q11203 375 aa4.14□□□□□ -1.75
SF3B1-210ENST00000482158 OVGP1Q12889 678 aa4.14□□□□□ -1.75
SF3B1-210ENST00000482158 SBK1Q52WX2 424 aa4.14□□□□□ -1.75
SF3B1-210ENST00000482158 HSP90AA5PQ58FG0 334 aa4.14□□□□□ -1.75
SF3B1-210ENST00000482158 NCR3LG1Q68D85 454 aa4.14□□□□□ -1.75
SF3B1-210ENST00000482158 RSPH1Q8WYR4 309 aa4.14□□□□□ -1.75
SF3B1-210ENST00000482158 OSTF1Q92882 214 aa4.14□□□□□ -1.75
SF3B1-210ENST00000482158 AKR1E2Q96JD6 320 aa4.14□□□□□ -1.75
SF3B1-210ENST00000482158 GLT8D2Q9H1C3 349 aa4.14□□□□□ -1.75
SF3B1-210ENST00000482158 CRLS1Q9UJA2 301 aa4.14□□□□□ -1.75
SF3B1-210ENST00000482158 LAMP5Q9UJQ1 280 aa4.14□□□□□ -1.75
SF3B1-210ENST00000482158 TP53TG3Q9ULZ0 132 aa4.14□□□□□ -1.75
SF3B1-210ENST00000482158 SAMD4AQ9UPU9 718 aaKnown RBP4.14□□□□□ -1.75
SF3B1-210ENST00000482158 SF3B1O75533 1304 aaKnown RBP eCLIP4.14□□□□□ -1.75
SF3B1-210ENST00000482158 ANKRD30BQ9BXX2 1392 aa4.14□□□□□ -1.75
SF3B1-210ENST00000482158 ATP10DQ9P241 1426 aa4.13□□□□□ -1.75
SF3B1-210ENST00000482158 PPIAL4CA0A0B4J2A2 164 aa4.13□□□□□ -1.75
SF3B1-210ENST00000482158 CLDN5O00501 218 aa4.13□□□□□ -1.75
SF3B1-210ENST00000482158 MAPK13O15264 365 aa4.13□□□□□ -1.75
SF3B1-210ENST00000482158 PEX11AO75192 247 aa4.13□□□□□ -1.75
SF3B1-210ENST00000482158 UFL1O94874 794 aa4.13□□□□□ -1.75
SF3B1-210ENST00000482158 GUCA1CO95843 209 aa4.13□□□□□ -1.75
SF3B1-210ENST00000482158 KRTAP1-4P0C5Y4 121 aa4.13□□□□□ -1.75
SF3B1-210ENST00000482158 PPIAL4GP0DN37 164 aa4.13□□□□□ -1.75
SF3B1-210ENST00000482158 PDHBP11177 359 aa4.13□□□□□ -1.75
SF3B1-210ENST00000482158 KRT13P13646 458 aa4.13□□□□□ -1.75
SF3B1-210ENST00000482158 DESP17661 470 aa4.13□□□□□ -1.75
SF3B1-210ENST00000482158 KLK2P20151 261 aa4.13□□□□□ -1.75
SF3B1-210ENST00000482158 TPSB2P20231 275 aa4.13□□□□□ -1.75
SF3B1-210ENST00000482158 DRD5P21918 477 aa4.13□□□□□ -1.75
SF3B1-210ENST00000482158 TPSAB1Q15661 275 aa4.13□□□□□ -1.75
SF3B1-210ENST00000482158 PRR4Q16378 134 aa4.13□□□□□ -1.75
SF3B1-210ENST00000482158 MAPK6Q16659 721 aa4.13□□□□□ -1.75
SF3B1-210ENST00000482158 KRT71Q3SY84 523 aa4.13□□□□□ -1.75
SF3B1-210ENST00000482158 TIGITQ495A1 244 aa4.13□□□□□ -1.75
SF3B1-210ENST00000482158 USH1GQ495M9 461 aa4.13□□□□□ -1.75
SF3B1-210ENST00000482158 KRTAP5-4Q6L8H1 288 aa4.13□□□□□ -1.75
SF3B1-210ENST00000482158 SCYL2Q6P3W7 929 aa4.13□□□□□ -1.75
SF3B1-210ENST00000482158 ARMCX2Q7L311 632 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms