RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 FCGR1BQ92637 280 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 NTNG2Q96CW9 530 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 ZBED6CLQ96FA7 236 aaPredicted RBP2.98□□□□□ -1.93
CBX3-207ENST00000481300 ZBED3Q96IU2 234 aaPredicted RBP2.98□□□□□ -1.93
CBX3-207ENST00000481300 C1orf147Q96MC9 270 aaPredicted RBP2.98□□□□□ -1.93
CBX3-207ENST00000481300 FAM111AQ96PZ2 611 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 APOL2Q9BQE5 337 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 TRIM9Q9C026 710 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 ZBP1Q9H171 429 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 C1orf21Q9H246 121 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 ALG9Q9H6U8 611 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 MYOZ2Q9NPC6 264 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 RPS10P5Q9NQ39 176 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 CENPMQ9NSP4 180 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 CLEC5AQ9NY25 188 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 CHMP5Q9NZZ3 219 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 ARMCX1Q9P291 453 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 MLXQ9UH92 298 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 ZNF490Q9ULM2 529 aaPredicted RBP2.98□□□□□ -1.93
CBX3-207ENST00000481300 SMC3Q9UQE7 1217 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 KLHDC2Q9Y2U9 406 aa2.98□□□□□ -1.93
CBX3-207ENST00000481300 C4AP0C0L4 1744 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 TNS1Q9HBL0 1735 aaKnown RBP2.97□□□□□ -1.93
CBX3-207ENST00000481300 IGHV3OR16-12A0A075B7B8 117 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 TRAV9-2A0A087WT02 112 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 A0A087WWV3 80 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 MPHOSPH10O00566 681 aaKnown RBP2.97□□□□□ -1.93
CBX3-207ENST00000481300 E2F3O00716 465 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 CPLX1O14810 134 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 NMT2O60551 498 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 RHBDL1O75783 438 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 STK17BO94768 372 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 TGFAP01135 160 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 PIGRP01833 764 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 GHRP10912 638 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 ARF4P18085 180 aaPredicted RBP2.97□□□□□ -1.93
CBX3-207ENST00000481300 PRDX2P32119 198 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 HMGCLP35914 325 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 EPS15P42566 896 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 HERVK_113P63132 956 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 ERVK-8P63133 956 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 IL9RQ01113 521 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 SRYQ05066 204 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 EIF2B1Q14232 305 aaKnown RBP2.97□□□□□ -1.93
CBX3-207ENST00000481300 SMC1AQ14683 1233 aaKnown RBP2.97□□□□□ -1.93
CBX3-207ENST00000481300 CD226Q15762 336 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 PPP1R3AQ16821 1122 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 MICAQ29983 383 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 SLC22A6Q4U2R8 563 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 LINC00242Q5T6M2 205 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 RBM43Q6ZSC3 357 aaKnown RBP2.97□□□□□ -1.93
CBX3-207ENST00000481300 SERINC5Q86VE9 423 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 VPS36Q86VN1 386 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 ERICH1Q86X53 443 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 ZNF397Q8NF99 534 aaPredicted RBP2.97□□□□□ -1.93
CBX3-207ENST00000481300 WDR36Q8NI36 951 aaKnown RBP2.97□□□□□ -1.93
CBX3-207ENST00000481300 ZNF671Q8TAW3 534 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 FAM151AQ8WW52 585 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 CRYGNQ8WXF5 182 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 CCDC51Q96ER9 411 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 MCCC1Q96RQ3 725 aaPredicted RBP2.97□□□□□ -1.93
CBX3-207ENST00000481300 LLPHQ9BRT6 129 aaKnown RBP2.97□□□□□ -1.93
CBX3-207ENST00000481300 ERVK-6Q9BXR3 956 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 NMNAT2Q9BZQ4 307 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 RAB17Q9H0T7 212 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 TSPY26PQ9H489 355 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 LY9Q9HBG7 655 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 TIGARQ9NQ88 270 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.97□□□□□ -1.93
CBX3-207ENST00000481300 ZNF446Q9NWS9 450 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 CNOT2Q9NZN8 540 aaKnown RBP2.97□□□□□ -1.93
CBX3-207ENST00000481300 DHRS4-AS1Q9P1J3 65 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 IL20RAQ9UHF4 553 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 PURGQ9UJV8 347 aaKnown RBP2.97□□□□□ -1.93
CBX3-207ENST00000481300 FZR1Q9UM11 496 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 PIN4Q9Y237 131 aaKnown RBP2.97□□□□□ -1.93
CBX3-207ENST00000481300 DHRS7Q9Y394 339 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 KIF3AQ9Y496 699 aa2.97□□□□□ -1.93
CBX3-207ENST00000481300 TNRC6CQ9HCJ0 1690 aaKnown RBP2.97□□□□□ -1.93
CBX3-207ENST00000481300 COL2A1P02458 1487 aaPredicted RBP2.96□□□□□ -1.93
CBX3-207ENST00000481300 COL24A1Q17RW2 1714 aa2.96□□□□□ -1.93
CBX3-207ENST00000481300 UBE4BO95155 1302 aa2.96□□□□□ -1.93
CBX3-207ENST00000481300 SBF2Q86WG5 1849 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 LRIT2A6NDA9 550 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 ZNF840PA6NDX5 716 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 MFSD2BA6NFX1 497 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 NPIPA2E9PIF3 369 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 C11orf98E9PRG8 122 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 PRPSAP2O60256 369 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 JAK2O60674 1132 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 ZNF354AO60765 605 aaPredicted RBP2.96□□□□□ -1.94
CBX3-207ENST00000481300 STAM2O75886 525 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 VENTXO95231 258 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 CTDNEP1O95476 244 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 PRAMEF12O95522 483 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 SLC35G4P0C7Q5 338 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 CALM1P0DP23 149 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 CALM2P0DP24 149 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 CALM3P0DP25 149 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 TOP1P11387 765 aaKnown RBP2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms