RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 ZNF550Q7Z398 422 aa13.71□□□□□ -0.21
LIMS3-203ENST00000480744 METTL25Q8N6Q8 603 aa13.71□□□□□ -0.21
LIMS3-203ENST00000480744 ZNF610Q8N9Z0 462 aa13.71□□□□□ -0.21
LIMS3-203ENST00000480744 JADE3Q92613 823 aa13.71□□□□□ -0.21
LIMS3-203ENST00000480744 CAVIN3Q969G5 261 aa13.71□□□□□ -0.21
LIMS3-203ENST00000480744 SH3YL1Q96HL8 342 aaPredicted RBP13.71□□□□□ -0.21
LIMS3-203ENST00000480744 TRMOQ9BU70 441 aa13.71□□□□□ -0.21
LIMS3-203ENST00000480744 TUBB1Q9H4B7 451 aa13.71□□□□□ -0.21
LIMS3-203ENST00000480744 DLL4Q9NR61 685 aa13.71□□□□□ -0.21
LIMS3-203ENST00000480744 BEX4Q9NWD9 120 aaPredicted RBP13.71□□□□□ -0.21
LIMS3-203ENST00000480744 ELOVL5Q9NYP7 299 aa13.71□□□□□ -0.21
LIMS3-203ENST00000480744 STOML1Q9UBI4 398 aa13.71□□□□□ -0.21
LIMS3-203ENST00000480744 DSCAMO60469 2012 aa13.71□□□□□ -0.22
LIMS3-203ENST00000480744 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.7□□□□□ -0.22
LIMS3-203ENST00000480744 IGLV3-32A0A0A0MS00 114 aa13.7□□□□□ -0.22
LIMS3-203ENST00000480744 C16orf97H3BN30 126 aa13.7□□□□□ -0.22
LIMS3-203ENST00000480744 LSM1O15116 133 aaKnown RBP13.7□□□□□ -0.22
LIMS3-203ENST00000480744 AQP8O94778 261 aa13.7□□□□□ -0.22
LIMS3-203ENST00000480744 PLGP00747 810 aaPredicted RBP13.7□□□□□ -0.22
LIMS3-203ENST00000480744 OPN1LWP04000 364 aa13.7□□□□□ -0.22
LIMS3-203ENST00000480744 ALOX5P09917 674 aa13.7□□□□□ -0.22
LIMS3-203ENST00000480744 FOSL1P15407 271 aa13.7□□□□□ -0.22
LIMS3-203ENST00000480744 HPGDP15428 266 aa13.7□□□□□ -0.22
LIMS3-203ENST00000480744 CCKARP32238 428 aa13.7□□□□□ -0.22
LIMS3-203ENST00000480744 UGT2B10P36537 528 aa13.7□□□□□ -0.22
LIMS3-203ENST00000480744 ASMTP46597 345 aa13.7□□□□□ -0.22
LIMS3-203ENST00000480744 ZNF41P51814 821 aaPredicted RBP13.7□□□□□ -0.22
LIMS3-203ENST00000480744 NKX6-1P78426 367 aaPredicted RBP13.7□□□□□ -0.22
LIMS3-203ENST00000480744 SLC18A2Q05940 514 aa13.7□□□□□ -0.22
LIMS3-203ENST00000480744 DUSP5Q16690 384 aa13.7□□□□□ -0.22
LIMS3-203ENST00000480744 ANKRD34AQ69YU3 496 aa13.7□□□□□ -0.22
LIMS3-203ENST00000480744 MFSD12Q6NUT3 480 aa13.7□□□□□ -0.22
LIMS3-203ENST00000480744 EMBQ6PCB8 327 aa13.7□□□□□ -0.22
LIMS3-203ENST00000480744 ZAR1Q86SH2 424 aa13.7□□□□□ -0.22
LIMS3-203ENST00000480744 GGNQ86UU5 652 aa13.7□□□□□ -0.22
LIMS3-203ENST00000480744 COX18Q8N8Q8 333 aa13.7□□□□□ -0.22
LIMS3-203ENST00000480744 SLC16A11Q8NCK7 471 aa13.7□□□□□ -0.22
LIMS3-203ENST00000480744 OR4C3Q8NH37 302 aa13.7□□□□□ -0.22
LIMS3-203ENST00000480744 AGR3Q8TD06 166 aa13.7□□□□□ -0.22
LIMS3-203ENST00000480744 GIMAP5Q96F15 307 aa13.7□□□□□ -0.22
LIMS3-203ENST00000480744 C16orf58Q96GQ5 468 aa13.7□□□□□ -0.22
LIMS3-203ENST00000480744 ZNF764Q96H86 408 aaPredicted RBP13.7□□□□□ -0.22
LIMS3-203ENST00000480744 FCRL1Q96LA6 429 aa13.7□□□□□ -0.22
LIMS3-203ENST00000480744 KLHL4Q9C0H6 718 aa13.7□□□□□ -0.22
LIMS3-203ENST00000480744 UBTD1Q9HAC8 227 aa13.7□□□□□ -0.22
LIMS3-203ENST00000480744 ACSS1Q9NUB1 689 aaPredicted RBP13.7□□□□□ -0.22
LIMS3-203ENST00000480744 GIMAP2Q9UG22 337 aa13.7□□□□□ -0.22
LIMS3-203ENST00000480744 CLEC4AQ9UMR7 237 aa13.7□□□□□ -0.22
LIMS3-203ENST00000480744 DNAJC15Q9Y5T4 150 aa13.7□□□□□ -0.22
LIMS3-203ENST00000480744 ARID1AO14497 2285 aa13.7□□□□□ -0.22
LIMS3-203ENST00000480744 NIPBLQ6KC79 2804 aaeCLIP13.69□□□□□ -0.22
LIMS3-203ENST00000480744 DEFB108AA8MXU0 73 aa13.69□□□□□ -0.22
LIMS3-203ENST00000480744 ALG1L2C9J202 215 aa13.69□□□□□ -0.22
LIMS3-203ENST00000480744 PIP5K1BO14986 540 aa13.69□□□□□ -0.22
LIMS3-203ENST00000480744 SIAH2O43255 324 aa13.69□□□□□ -0.22
LIMS3-203ENST00000480744 TBX19O60806 448 aa13.69□□□□□ -0.22
LIMS3-203ENST00000480744 KCNK2O95069 426 aa13.69□□□□□ -0.22
LIMS3-203ENST00000480744 CGAP01215 116 aa13.69□□□□□ -0.22
LIMS3-203ENST00000480744 CHRNGP07510 517 aa13.69□□□□□ -0.22
LIMS3-203ENST00000480744 NUDT17P0C025 328 aa13.69□□□□□ -0.22
LIMS3-203ENST00000480744 CD8BP10966 210 aa13.69□□□□□ -0.22
LIMS3-203ENST00000480744 BCKDHAP12694 445 aa13.69□□□□□ -0.22
LIMS3-203ENST00000480744 ZNF17P17021 662 aa13.69□□□□□ -0.22
LIMS3-203ENST00000480744 ALDH3A1P30838 453 aa13.69□□□□□ -0.22
LIMS3-203ENST00000480744 HPCAL1P37235 193 aa13.69□□□□□ -0.22
LIMS3-203ENST00000480744 MAP3K8P41279 467 aa13.69□□□□□ -0.22
LIMS3-203ENST00000480744 SLC6A8P48029 635 aa13.69□□□□□ -0.22
LIMS3-203ENST00000480744 CTBP2P56545 445 aa13.69□□□□□ -0.22
LIMS3-203ENST00000480744 PDE7AQ13946 482 aa13.69□□□□□ -0.22
LIMS3-203ENST00000480744 TMEM44Q2T9K0 475 aa13.69□□□□□ -0.22
LIMS3-203ENST00000480744 CCNJQ5T5M9 372 aa13.69□□□□□ -0.22
LIMS3-203ENST00000480744 FAM214BQ7L5A3 538 aa13.69□□□□□ -0.22
LIMS3-203ENST00000480744 R3HCC1LQ7Z5L2 792 aaKnown RBP13.69□□□□□ -0.22
LIMS3-203ENST00000480744 WDR75Q8IWA0 830 aaKnown RBP13.69□□□□□ -0.22
LIMS3-203ENST00000480744 OR6Y1Q8NGX8 325 aa13.69□□□□□ -0.22
LIMS3-203ENST00000480744 OR10D3Q8NH80 312 aa13.69□□□□□ -0.22
LIMS3-203ENST00000480744 TWIST2Q8WVJ9 160 aa13.69□□□□□ -0.22
LIMS3-203ENST00000480744 HOXB13Q92826 284 aaPredicted RBP13.69□□□□□ -0.22
LIMS3-203ENST00000480744 APOPT1Q96IL0 206 aa13.69□□□□□ -0.22
LIMS3-203ENST00000480744 MECRQ9BV79 373 aa13.69□□□□□ -0.22
LIMS3-203ENST00000480744 TMEM185BQ9H7F4 350 aa13.69□□□□□ -0.22
LIMS3-203ENST00000480744 HHATLQ9HCP6 504 aa13.69□□□□□ -0.22
LIMS3-203ENST00000480744 ZCCHC3Q9NUD5 404 aaKnown RBP13.69□□□□□ -0.22
LIMS3-203ENST00000480744 FBXO34Q9NWN3 711 aa13.69□□□□□ -0.22
LIMS3-203ENST00000480744 TMED5Q9Y3A6 229 aa13.69□□□□□ -0.22
LIMS3-203ENST00000480744 EMC9Q9Y3B6 208 aa13.69□□□□□ -0.22
LIMS3-203ENST00000480744 VPS13CQ709C8 3753 aa13.69□□□□□ -0.22
LIMS3-203ENST00000480744 A0A087WZY1 265 aa13.68□□□□□ -0.22
LIMS3-203ENST00000480744 A0A1W2PRB8 838 aa13.68□□□□□ -0.22
LIMS3-203ENST00000480744 SCDO00767 359 aa13.68□□□□□ -0.22
LIMS3-203ENST00000480744 SYNGR4O95473 234 aa13.68□□□□□ -0.22
LIMS3-203ENST00000480744 TBXA2RP21731 343 aa13.68□□□□□ -0.22
LIMS3-203ENST00000480744 CRYGSP22914 178 aa13.68□□□□□ -0.22
LIMS3-203ENST00000480744 HOXC12P31275 282 aa13.68□□□□□ -0.22
LIMS3-203ENST00000480744 FRKP42685 505 aaPredicted RBP13.68□□□□□ -0.22
LIMS3-203ENST00000480744 PCYT1AP49585 367 aa13.68□□□□□ -0.22
LIMS3-203ENST00000480744 PRIM2P49643 509 aa13.68□□□□□ -0.22
LIMS3-203ENST00000480744 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.68□□□□□ -0.22
LIMS3-203ENST00000480744 ARL13AQ5H913 290 aaPredicted RBP13.68□□□□□ -0.22
LIMS3-203ENST00000480744 RNF165Q6ZSG1 346 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms