RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 EMC9Q9Y3B6 208 aa10.35□□□□□ -0.75
CCM2-213ENST00000480658 SNX8Q9Y5X2 465 aa10.35□□□□□ -0.75
CCM2-213ENST00000480658 EML6Q6ZMW3 1958 aa10.35□□□□□ -0.75
CCM2-213ENST00000480658 DNAJC13O75165 2243 aa10.34□□□□□ -0.75
CCM2-213ENST00000480658 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.34□□□□□ -0.75
CCM2-213ENST00000480658 A0A1W2PNV4 684 aa10.34□□□□□ -0.75
CCM2-213ENST00000480658 OR2M5A3KFT3 312 aa10.34□□□□□ -0.75
CCM2-213ENST00000480658 A8MXE2 369 aa10.34□□□□□ -0.75
CCM2-213ENST00000480658 H3BML4 177 aa10.34□□□□□ -0.75
CCM2-213ENST00000480658 PEX11AO75192 247 aa10.34□□□□□ -0.75
CCM2-213ENST00000480658 SPAG7O75391 227 aa10.34□□□□□ -0.75
CCM2-213ENST00000480658 OXSR1O95747 527 aaPredicted RBP10.34□□□□□ -0.75
CCM2-213ENST00000480658 PLGP00747 810 aaPredicted RBP10.34□□□□□ -0.75
CCM2-213ENST00000480658 HMGN2P05204 90 aaKnown RBP10.34□□□□□ -0.75
CCM2-213ENST00000480658 CD8BP10966 210 aa10.34□□□□□ -0.75
CCM2-213ENST00000480658 DNAJA1P31689 397 aaKnown RBP10.34□□□□□ -0.75
CCM2-213ENST00000480658 ETV4P43268 484 aa10.34□□□□□ -0.75
CCM2-213ENST00000480658 CCT3P49368 545 aaKnown RBP10.34□□□□□ -0.75
CCM2-213ENST00000480658 ANXA11P50995 505 aaKnown RBP10.34□□□□□ -0.75
CCM2-213ENST00000480658 CLNS1AP54105 237 aaKnown RBP10.34□□□□□ -0.75
CCM2-213ENST00000480658 RIPPLY3P57055 190 aa10.34□□□□□ -0.75
CCM2-213ENST00000480658 B3GALT5-AS1P59052 145 aa10.34□□□□□ -0.75
CCM2-213ENST00000480658 EMX2Q04743 252 aa10.34□□□□□ -0.75
CCM2-213ENST00000480658 GRAMD1BQ3KR37 738 aa10.34□□□□□ -0.75
CCM2-213ENST00000480658 C6orf136Q5SQH8 315 aa10.34□□□□□ -0.75
CCM2-213ENST00000480658 ANXA8L1Q5VT79 327 aa10.34□□□□□ -0.75
CCM2-213ENST00000480658 CDC73Q6P1J9 531 aa10.34□□□□□ -0.75
CCM2-213ENST00000480658 ESPNLQ6ZVH7 1005 aa10.34□□□□□ -0.75
CCM2-213ENST00000480658 MARCH3Q86UD3 253 aa10.34□□□□□ -0.75
CCM2-213ENST00000480658 STK32CQ86UX6 486 aa10.34□□□□□ -0.75
CCM2-213ENST00000480658 EXOC3L1Q86VI1 746 aa10.34□□□□□ -0.75
CCM2-213ENST00000480658 UBQLNLQ8IYU4 475 aa10.34□□□□□ -0.75
CCM2-213ENST00000480658 FAM110BQ8TC76 370 aa10.34□□□□□ -0.75
CCM2-213ENST00000480658 AGR3Q8TD06 166 aa10.34□□□□□ -0.75
CCM2-213ENST00000480658 PIK3R3Q92569 461 aa10.34□□□□□ -0.75
CCM2-213ENST00000480658 COQ8BQ96D53 544 aa10.34□□□□□ -0.75
CCM2-213ENST00000480658 MBD6Q96DN6 1003 aa10.34□□□□□ -0.75
CCM2-213ENST00000480658 GIMAP5Q96F15 307 aa10.34□□□□□ -0.75
CCM2-213ENST00000480658 REXO5Q96IC2 774 aaKnown RBP10.34□□□□□ -0.75
CCM2-213ENST00000480658 ALPK1Q96QP1 1244 aa10.34□□□□□ -0.75
CCM2-213ENST00000480658 TACO1Q9BSH4 297 aaKnown RBP10.34□□□□□ -0.75
CCM2-213ENST00000480658 DUSP26Q9BV47 211 aa10.34□□□□□ -0.75
CCM2-213ENST00000480658 PRRG4Q9BZD6 226 aa10.34□□□□□ -0.75
CCM2-213ENST00000480658 C12orf65Q9H3J6 166 aaKnown RBP10.34□□□□□ -0.75
CCM2-213ENST00000480658 RNF122Q9H9V4 155 aa10.34□□□□□ -0.75
CCM2-213ENST00000480658 GALNT8Q9NY28 637 aa10.34□□□□□ -0.75
CCM2-213ENST00000480658 MED11Q9P086 117 aa10.34□□□□□ -0.75
CCM2-213ENST00000480658 RAP2CQ9Y3L5 183 aa10.34□□□□□ -0.75
CCM2-213ENST00000480658 PTGDR2Q9Y5Y4 395 aa10.34□□□□□ -0.75
CCM2-213ENST00000480658 NCKAP5O14513 1909 aa10.34□□□□□ -0.75
CCM2-213ENST00000480658 PKDREJQ9NTG1 2253 aa10.33□□□□□ -0.76
CCM2-213ENST00000480658 PCNX1Q96RV3 2341 aa10.33□□□□□ -0.76
CCM2-213ENST00000480658 ANKRD17O75179 2603 aaKnown RBP10.33□□□□□ -0.76
CCM2-213ENST00000480658 TMEM233B4DJY2 109 aa10.33□□□□□ -0.76
CCM2-213ENST00000480658 RNASET2O00584 256 aaKnown RBP10.33□□□□□ -0.76
CCM2-213ENST00000480658 CFLARO15519 480 aa10.33□□□□□ -0.76
CCM2-213ENST00000480658 SEC14L5O43304 696 aa10.33□□□□□ -0.76
CCM2-213ENST00000480658 ERLIN1O75477 346 aa10.33□□□□□ -0.76
CCM2-213ENST00000480658 SKAP2O75563 359 aaPredicted RBP10.33□□□□□ -0.76
CCM2-213ENST00000480658 RAF1P04049 648 aa10.33□□□□□ -0.76
CCM2-213ENST00000480658 PPP3CBP16298 524 aa10.33□□□□□ -0.76
CCM2-213ENST00000480658 CPOXP36551 454 aa10.33□□□□□ -0.76
CCM2-213ENST00000480658 RPL14P50914 215 aaKnown RBP10.33□□□□□ -0.76
CCM2-213ENST00000480658 ART1P52961 327 aa10.33□□□□□ -0.76
CCM2-213ENST00000480658 CLDN8P56748 225 aa10.33□□□□□ -0.76
CCM2-213ENST00000480658 KRTAP10-9P60411 292 aa10.33□□□□□ -0.76
CCM2-213ENST00000480658 RAC1P63000 192 aa10.33□□□□□ -0.76
CCM2-213ENST00000480658 ZNF844Q08AG5 666 aa10.33□□□□□ -0.76
CCM2-213ENST00000480658 LASP1Q14847 261 aaKnown RBP10.33□□□□□ -0.76
CCM2-213ENST00000480658 PTGR1Q14914 329 aa10.33□□□□□ -0.76
CCM2-213ENST00000480658 TESK1Q15569 626 aa10.33□□□□□ -0.76
CCM2-213ENST00000480658 DUSP5Q16690 384 aa10.33□□□□□ -0.76
CCM2-213ENST00000480658 IL23RQ5VWK5 629 aa10.33□□□□□ -0.76
CCM2-213ENST00000480658 ANKRD26P1Q6NSI1 321 aa10.33□□□□□ -0.76
CCM2-213ENST00000480658 ZCCHC23Q6ZST2 131 aa10.33□□□□□ -0.76
CCM2-213ENST00000480658 FAM214BQ7L5A3 538 aa10.33□□□□□ -0.76
CCM2-213ENST00000480658 LUZP2Q86TE4 346 aa10.33□□□□□ -0.76
CCM2-213ENST00000480658 TRIML2Q8N7C3 387 aa10.33□□□□□ -0.76
CCM2-213ENST00000480658 CNEP1R1Q8N9A8 125 aa10.33□□□□□ -0.76
CCM2-213ENST00000480658 SLC16A11Q8NCK7 471 aa10.33□□□□□ -0.76
CCM2-213ENST00000480658 TOR1AIP2Q8NFQ8 470 aa10.33□□□□□ -0.76
CCM2-213ENST00000480658 OR8J2Q8NGG1 315 aa10.33□□□□□ -0.76
CCM2-213ENST00000480658 CLHC1Q8NHS4 586 aa10.33□□□□□ -0.76
CCM2-213ENST00000480658 B4GALNT2Q8NHY0 566 aa10.33□□□□□ -0.76
CCM2-213ENST00000480658 RAB3IL1Q8TBN0 382 aa10.33□□□□□ -0.76
CCM2-213ENST00000480658 PGM2Q96G03 612 aa10.33□□□□□ -0.76
CCM2-213ENST00000480658 GMPPAQ96IJ6 420 aaPredicted RBP10.33□□□□□ -0.76
CCM2-213ENST00000480658 ZNF845Q96IR2 970 aaPredicted RBP10.33□□□□□ -0.76
CCM2-213ENST00000480658 USB1Q9BQ65 265 aaKnown RBP10.33□□□□□ -0.76
CCM2-213ENST00000480658 GPATCH1Q9BRR8 931 aaKnown RBP10.33□□□□□ -0.76
CCM2-213ENST00000480658 PINK1Q9BXM7 581 aa10.33□□□□□ -0.76
CCM2-213ENST00000480658 GP6Q9HCN6 339 aa10.33□□□□□ -0.76
CCM2-213ENST00000480658 EXD2Q9NVH0 621 aa10.33□□□□□ -0.76
CCM2-213ENST00000480658 BAIAP2L1Q9UHR4 511 aa10.33□□□□□ -0.76
CCM2-213ENST00000480658 ST6GALNAC2Q9UJ37 374 aa10.33□□□□□ -0.76
CCM2-213ENST00000480658 ZNF337Q9Y3M9 751 aa10.33□□□□□ -0.76
CCM2-213ENST00000480658 GPC6Q9Y625 555 aaPredicted RBP10.33□□□□□ -0.76
CCM2-213ENST00000480658 DCHS2Q6V1P9 2916 aa10.33□□□□□ -0.76
CCM2-213ENST00000480658 PDZD2O15018 2839 aa10.33□□□□□ -0.76
CCM2-213ENST00000480658 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms