RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 SERINC4A6NH21 518 aa16.15■□□□□ 0.18
UPF3A-206ENST00000480362 M0R3H8 397 aa16.15■□□□□ 0.18
UPF3A-206ENST00000480362 SCDO00767 359 aa16.15■□□□□ 0.18
UPF3A-206ENST00000480362 CLOCKO15516 846 aa16.15■□□□□ 0.18
UPF3A-206ENST00000480362 DIRAS1O95057 198 aa16.15■□□□□ 0.18
UPF3A-206ENST00000480362 CST1P01037 141 aa16.15■□□□□ 0.18
UPF3A-206ENST00000480362 IFNW1P05000 195 aa16.15■□□□□ 0.18
UPF3A-206ENST00000480362 FBXO45P0C2W1 286 aa16.15■□□□□ 0.18
UPF3A-206ENST00000480362 PRKAR1AP10644 381 aa16.15■□□□□ 0.18
UPF3A-206ENST00000480362 YAP1P46937 504 aaKnown RBP16.15■□□□□ 0.18
UPF3A-206ENST00000480362 SSR4P51571 173 aa16.15■□□□□ 0.18
UPF3A-206ENST00000480362 FBXW4P57775 412 aa16.15■□□□□ 0.18
UPF3A-206ENST00000480362 AIMP2Q13155 320 aaKnown RBP16.15■□□□□ 0.18
UPF3A-206ENST00000480362 FGFBP1Q14512 234 aa16.15■□□□□ 0.18
UPF3A-206ENST00000480362 ATP6AP1Q15904 470 aa16.15■□□□□ 0.18
UPF3A-206ENST00000480362 SNCBQ16143 134 aa16.15■□□□□ 0.18
UPF3A-206ENST00000480362 NRF1Q16656 503 aa16.15■□□□□ 0.18
UPF3A-206ENST00000480362 B3GNTL1Q67FW5 361 aaPredicted RBP16.15■□□□□ 0.18
UPF3A-206ENST00000480362 JMJD6Q6NYC1 403 aaPredicted RBP16.15■□□□□ 0.18
UPF3A-206ENST00000480362 NUP54Q7Z3B4 507 aa16.15■□□□□ 0.18
UPF3A-206ENST00000480362 RBM45Q8IUH3 476 aaKnown RBP16.15■□□□□ 0.18
UPF3A-206ENST00000480362 SIRT6Q8N6T7 355 aa16.15■□□□□ 0.18
UPF3A-206ENST00000480362 OR5M3Q8NGP4 307 aa16.15■□□□□ 0.18
UPF3A-206ENST00000480362 OIT3Q8WWZ8 545 aa16.15■□□□□ 0.18
UPF3A-206ENST00000480362 PSMF1Q92530 271 aa16.15■□□□□ 0.18
UPF3A-206ENST00000480362 HGDQ93099 445 aa16.15■□□□□ 0.18
UPF3A-206ENST00000480362 RASSF4Q9H2L5 321 aa16.15■□□□□ 0.18
UPF3A-206ENST00000480362 NDUFAF4Q9P032 175 aa16.15■□□□□ 0.18
UPF3A-206ENST00000480362 CDHR4A6H8M9 788 aa16.14■□□□□ 0.17
UPF3A-206ENST00000480362 ARGFXA6NJG6 315 aa16.14■□□□□ 0.17
UPF3A-206ENST00000480362 ZNF891A8MT65 544 aaPredicted RBP16.14■□□□□ 0.17
UPF3A-206ENST00000480362 GNGT2O14610 69 aa16.14■□□□□ 0.17
UPF3A-206ENST00000480362 KLK10O43240 276 aa16.14■□□□□ 0.17
UPF3A-206ENST00000480362 FRS3O43559 492 aa16.14■□□□□ 0.17
UPF3A-206ENST00000480362 DEAF1O75398 565 aaPredicted RBP16.14■□□□□ 0.17
UPF3A-206ENST00000480362 LDLRP01130 860 aa16.14■□□□□ 0.17
UPF3A-206ENST00000480362 NGFRP08138 427 aa16.14■□□□□ 0.17
UPF3A-206ENST00000480362 ITGA2P17301 1181 aa16.14■□□□□ 0.17
UPF3A-206ENST00000480362 SOX3P41225 446 aa16.14■□□□□ 0.17
UPF3A-206ENST00000480362 TMED10P49755 219 aaKnown RBP16.14■□□□□ 0.17
UPF3A-206ENST00000480362 ST13P50502 369 aaKnown RBP16.14■□□□□ 0.17
UPF3A-206ENST00000480362 ZSWIM7Q19AV6 140 aa16.14■□□□□ 0.17
UPF3A-206ENST00000480362 OPN5Q6U736 354 aa16.14■□□□□ 0.17
UPF3A-206ENST00000480362 APOOLQ6UXV4 268 aa16.14■□□□□ 0.17
UPF3A-206ENST00000480362 CLEC1AQ8NC01 280 aa16.14■□□□□ 0.17
UPF3A-206ENST00000480362 OR6T1Q8NGN1 323 aa16.14■□□□□ 0.17
UPF3A-206ENST00000480362 ASB15Q8WXK1 588 aa16.14■□□□□ 0.17
UPF3A-206ENST00000480362 CNOT9Q92600 299 aaKnown RBP16.14■□□□□ 0.17
UPF3A-206ENST00000480362 TMCO6Q96DC7 493 aa16.14■□□□□ 0.17
UPF3A-206ENST00000480362 ZNF300Q96RE9 604 aaPredicted RBP16.14■□□□□ 0.17
UPF3A-206ENST00000480362 NODALQ96S42 347 aa16.14■□□□□ 0.17
UPF3A-206ENST00000480362 ZNF347Q96SE7 839 aa16.14■□□□□ 0.17
UPF3A-206ENST00000480362 DNAJB9Q9UBS3 223 aa16.14■□□□□ 0.17
UPF3A-206ENST00000480362 ENPP4Q9Y6X5 453 aa16.14■□□□□ 0.17
UPF3A-206ENST00000480362 J3KTA2 159 aa16.13■□□□□ 0.17
UPF3A-206ENST00000480362 FADS1O60427 444 aa16.13■□□□□ 0.17
UPF3A-206ENST00000480362 BCAS1O75363 584 aaPredicted RBP16.13■□□□□ 0.17
UPF3A-206ENST00000480362 OR6B1O95007 311 aa16.13■□□□□ 0.17
UPF3A-206ENST00000480362 CSTAP01040 98 aa16.13■□□□□ 0.17
UPF3A-206ENST00000480362 ITGA3P26006 1051 aa16.13■□□□□ 0.17
UPF3A-206ENST00000480362 ADH7P40394 386 aa16.13■□□□□ 0.17
UPF3A-206ENST00000480362 RRADP55042 308 aa16.13■□□□□ 0.17
UPF3A-206ENST00000480362 RGS8P57771 180 aaPredicted RBP16.13■□□□□ 0.17
UPF3A-206ENST00000480362 PLAURQ03405 335 aa16.13■□□□□ 0.17
UPF3A-206ENST00000480362 NPTX1Q15818 432 aa16.13■□□□□ 0.17
UPF3A-206ENST00000480362 NTRK2Q16620 822 aa16.13■□□□□ 0.17
UPF3A-206ENST00000480362 MEP1AQ16819 746 aa16.13■□□□□ 0.17
UPF3A-206ENST00000480362 ZNF791Q3KP31 576 aaPredicted RBP16.13■□□□□ 0.17
UPF3A-206ENST00000480362 FNDC7Q5VTL7 733 aa16.13■□□□□ 0.17
UPF3A-206ENST00000480362 IL20RBQ6UXL0 311 aa16.13■□□□□ 0.17
UPF3A-206ENST00000480362 DEF8Q6ZN54 512 aa16.13■□□□□ 0.17
UPF3A-206ENST00000480362 MARCH3Q86UD3 253 aa16.13■□□□□ 0.17
UPF3A-206ENST00000480362 GRAMD2AQ8IUY3 354 aa16.13■□□□□ 0.17
UPF3A-206ENST00000480362 CMIPQ8IY22 773 aa16.13■□□□□ 0.17
UPF3A-206ENST00000480362 GATSQ8NAP1 163 aa16.13■□□□□ 0.17
UPF3A-206ENST00000480362 POGLUT1Q8NBL1 392 aa16.13■□□□□ 0.17
UPF3A-206ENST00000480362 SNIP1Q8TAD8 396 aaKnown RBP16.13■□□□□ 0.17
UPF3A-206ENST00000480362 TTC9Q92623 222 aa16.13■□□□□ 0.17
UPF3A-206ENST00000480362 SPACA9Q96E40 222 aaPredicted RBP16.13■□□□□ 0.17
UPF3A-206ENST00000480362 CENPNQ96H22 339 aaPredicted RBP16.13■□□□□ 0.17
UPF3A-206ENST00000480362 CCNL2Q96S94 520 aaPredicted RBP16.13■□□□□ 0.17
UPF3A-206ENST00000480362 BDH2Q9BUT1 245 aa16.13■□□□□ 0.17
UPF3A-206ENST00000480362 DPH1Q9BZG8 443 aa16.13■□□□□ 0.17
UPF3A-206ENST00000480362 LHPPQ9H008 270 aa16.13■□□□□ 0.17
UPF3A-206ENST00000480362 EVA1AQ9H8M9 152 aa16.13■□□□□ 0.17
UPF3A-206ENST00000480362 STOML1Q9UBI4 398 aa16.13■□□□□ 0.17
UPF3A-206ENST00000480362 SLC35A3Q9Y2D2 325 aa16.13■□□□□ 0.17
UPF3A-206ENST00000480362 FAM32AQ9Y421 112 aaKnown RBP16.13■□□□□ 0.17
UPF3A-206ENST00000480362 WDFY3Q8IZQ1 3526 aa16.13■□□□□ 0.17
UPF3A-206ENST00000480362 A0A1W2PQD3 144 aa16.12■□□□□ 0.17
UPF3A-206ENST00000480362 ALG1L2C9J202 215 aa16.12■□□□□ 0.17
UPF3A-206ENST00000480362 EFSO43281 561 aa16.12■□□□□ 0.17
UPF3A-206ENST00000480362 GKN3PP0CG01 181 aa16.12■□□□□ 0.17
UPF3A-206ENST00000480362 RHCEP18577 417 aa16.12■□□□□ 0.17
UPF3A-206ENST00000480362 CLK3P49761 638 aaKnown RBP16.12■□□□□ 0.17
UPF3A-206ENST00000480362 HOXC5Q00444 222 aa16.12■□□□□ 0.17
UPF3A-206ENST00000480362 CDC20Q12834 499 aa16.12■□□□□ 0.17
UPF3A-206ENST00000480362 CD226Q15762 336 aa16.12■□□□□ 0.17
UPF3A-206ENST00000480362 CRTC2Q53ET0 693 aaPredicted RBP16.12■□□□□ 0.17
UPF3A-206ENST00000480362 ACER2Q5QJU3 275 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms