RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 CTU2Q2VPK5 515 aaKnown RBP10.18□□□□□ -0.78
VTI1A-204ENST00000480057 BROXQ5VW32 411 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 SLX4IPQ5VYV7 408 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 LAIR2Q6ISS4 152 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 MBOAT2Q6ZWT7 520 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 GDF7Q7Z4P5 450 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 HMGN2P46Q86SG4 172 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 ZAR1Q86SH2 424 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 LSMEM1Q8N8F7 131 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 ZNF527Q8NB42 609 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 RHOXF1Q8NHV9 184 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 WDR36Q8NI36 951 aaKnown RBP10.18□□□□□ -0.78
VTI1A-204ENST00000480057 PIGXQ8TBF5 258 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 RHBDD1Q8TEB9 315 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 TRUB1Q8WWH5 349 aaKnown RBP10.18□□□□□ -0.78
VTI1A-204ENST00000480057 GTPBP3Q969Y2 492 aaKnown RBP10.18□□□□□ -0.78
VTI1A-204ENST00000480057 ADIPOR1Q96A54 375 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 TP53INP1Q96A56 240 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 HSPBAP1Q96EW2 488 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 TUBA1CQ9BQE3 449 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 TRIM2Q9C040 744 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 OR8D2Q9GZM6 311 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 ADNPQ9H2P0 1102 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 VCX3AQ9NNX9 186 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 CCNB1IP1Q9NPC3 277 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 RXFP3Q9NSD7 469 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 SEMA4GQ9NTN9 838 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 PLCXD1Q9NUJ7 323 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 OCIAD1Q9NX40 245 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 SCN3BQ9NY72 215 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 CTSFQ9UBX1 484 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 DTX4Q9Y2E6 619 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 A0A087WUU8 490 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 C2orf92A0A1B0GVN3 265 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 HTR3EA5X5Y0 456 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 SERINC4A6NH21 518 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 MEN1O00255 615 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 ALOX12BO75342 701 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 HEXBP07686 556 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 NGFRP08138 427 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 CD63P08962 238 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 LINGO3P0C6S8 592 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 ATP6V1B1P15313 513 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 JUNBP17275 347 aaPredicted RBP10.17□□□□□ -0.78
VTI1A-204ENST00000480057 FUT4P22083 530 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 MMP11P24347 488 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 FPR3P25089 353 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 EPHA2P29317 976 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 STAT5AP42229 794 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 EFNA3P52797 238 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 CDC42P60953 191 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 TSPAN31Q12999 210 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 PTGES3Q15185 160 aaKnown RBP10.17□□□□□ -0.78
VTI1A-204ENST00000480057 OR1Q1Q15612 314 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 NADK2Q4G0N4 442 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 KLHL26Q53HC5 615 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 PDZK1Q5T2W1 519 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 HLA-DQA1Q5Y7H0 255 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 TCEAL6Q6IPX3 200 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 ZNF730Q6ZMV8 503 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 RBM44Q6ZP01 1051 aaKnown RBP10.17□□□□□ -0.78
VTI1A-204ENST00000480057 RASSF6Q6ZTQ3 369 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 RRM2BQ7LG56 351 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 SLC29A4Q7RTT9 530 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 ANKRD37Q7Z713 158 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 ZER1Q7Z7L7 766 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 CCDC71Q8IV32 467 aaPredicted RBP10.17□□□□□ -0.78
VTI1A-204ENST00000480057 ENTHD1Q8IYW4 607 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 CLDN22Q8N7P3 220 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 ZNF441Q8N8Z8 693 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 SLC38A9Q8NBW4 561 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 OR4N2Q8NGD1 307 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 OR8K3Q8NH51 312 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 IPCEF1Q8WWN9 437 aaPredicted RBP10.17□□□□□ -0.78
VTI1A-204ENST00000480057 METTL21AQ8WXB1 218 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 TCEAL3Q969E4 200 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 MPP4Q96JB8 637 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 HS6ST2Q96MM7 605 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 CCNL2Q96S94 520 aaPredicted RBP10.17□□□□□ -0.78
VTI1A-204ENST00000480057 ZPBPQ9BS86 351 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 NUDT9Q9BW91 350 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 SEMA4CQ9C0C4 833 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 SMOC1Q9H4F8 434 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 DUSP21Q9H596 190 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 TMEM27Q9HBJ8 222 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 SLC25A19Q9HC21 320 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 EXOSC3Q9NQT5 275 aaKnown RBP10.17□□□□□ -0.78
VTI1A-204ENST00000480057 UBQLN4Q9NRR5 601 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 RYDENQ9NUL5 291 aaKnown RBP10.17□□□□□ -0.78
VTI1A-204ENST00000480057 DNAJB12Q9NXW2 375 aaKnown RBP10.17□□□□□ -0.78
VTI1A-204ENST00000480057 C19orf25Q9UFG5 118 aaPredicted RBP10.17□□□□□ -0.78
VTI1A-204ENST00000480057 PCDHGB1Q9Y5G3 927 aa10.17□□□□□ -0.78
VTI1A-204ENST00000480057 FER1L5A0AVI2 2057 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 NINQ8N4C6 2090 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 NPIPA5A0A0B4J1W7 369 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 SH3D21A4FU49 640 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 SAGE2PA6NJ88 616 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 CLDN24A6NM45 220 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 A8MUA0 341 aa10.16□□□□□ -0.78
VTI1A-204ENST00000480057 IDSB3KWA1 339 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms